Basic Information

Insect: Noctua pronuba
Gene Symbol: -
Assembly: GCA_905220335.1
Location: LR999920.1:7454653-7456992[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.018 13 6.6 2.7 18 43 9 31 5 32 0.93

2 19 0.15 1.1e+02 3.7 0.8 17 44 36 60 31 60 0.80

3 19 0.0015 1.1 10.1 0.0 18 43 68 90 65 91 0.90

4 19 0.00011 0.079 13.7 1.5 17 44 98 122 95 122 0.91

5 19 0.0007 0.51 11.1 1.2 18 44 129 152 127 152 0.94

6 19 9.6e-05 0.07 13.9 1.5 14 43 156 182 153 183 0.89

7 19 0.0068 4.9 8.0 0.5 18 44 189 212 185 212 0.90

8 19 0.012 9 7.1 0.8 18 43 220 242 214 243 0.82

9 19 0.59 4.3e+02 1.8 0.5 15 43 300 325 284 326 0.76

10 19 8.2 5.9e+03 -1.9 0.2 18 32 333 346 331 351 0.75

11 19 0.3 2.2e+02 2.7 0.0 15 27 359 371 355 385 0.80

12 19 0.39 2.8e+02 2.3 4.7 17 43 406 429 399 430 0.89

13 19 0.085 61 4.4 2.2 14 30 432 452 430 458 0.76

14 19 0.005 3.6 8.4 3.0 13 43 460 487 447 488 0.79

15 19 0.11 78 4.1 0.8 17 44 493 517 489 517 0.85

16 19 0.8 5.8e+02 1.3 0.8 18 28 524 534 520 547 0.82

17 19 4.6 3.3e+03 -1.1 0.6 19 43 555 576 551 577 0.73

18 19 9.8e-05 0.071 13.8 1.9 5 43 605 642 604 643 0.85

19 19 2.5 1.8e+03 -0.3 0.5 16 40 661 687 652 702 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.018	13	6.6	2.7	18	43	9	31	5	32	0.93
2	19	0.15	1.1e+02	3.7	0.8	17	44	36	60	31	60	0.80
3	19	0.0015	1.1	10.1	0.0	18	43	68	90	65	91	0.90
4	19	0.00011	0.079	13.7	1.5	17	44	98	122	95	122	0.91
5	19	0.0007	0.51	11.1	1.2	18	44	129	152	127	152	0.94
6	19	9.6e-05	0.07	13.9	1.5	14	43	156	182	153	183	0.89
7	19	0.0068	4.9	8.0	0.5	18	44	189	212	185	212	0.90
8	19	0.012	9	7.1	0.8	18	43	220	242	214	243	0.82
9	19	0.59	4.3e+02	1.8	0.5	15	43	300	325	284	326	0.76
10	19	8.2	5.9e+03	-1.9	0.2	18	32	333	346	331	351	0.75
11	19	0.3	2.2e+02	2.7	0.0	15	27	359	371	355	385	0.80
12	19	0.39	2.8e+02	2.3	4.7	17	43	406	429	399	430	0.89
13	19	0.085	61	4.4	2.2	14	30	432	452	430	458	0.76
14	19	0.005	3.6	8.4	3.0	13	43	460	487	447	488	0.79
15	19	0.11	78	4.1	0.8	17	44	493	517	489	517	0.85
16	19	0.8	5.8e+02	1.3	0.8	18	28	524	534	520	547	0.82
17	19	4.6	3.3e+03	-1.1	0.6	19	43	555	576	551	577	0.73
18	19	9.8e-05	0.071	13.8	1.9	5	43	605	642	604	643	0.85
19	19	2.5	1.8e+03	-0.3	0.5	16	40	661	687	652	702	0.82

Sequence Information

Coding Sequence: ATGTACACAAATCAACTGGATTATGTTTGTGACTACTGTTCGAGGACTTTCACAAGAAAATATAACTTACAGACGCATATAGAAAACTGTCATATTAACTCTTCGTGTCACTGTGACATTTGTGGCCAGAATTTCGGCAGTCCAGCCGGATTACTCCAACATTTATCCCGCGGACACAATAATTATGGTCAGCCTTTTCCAGAATGTGAACTATGCGGCCGAATTTTCACAAGAAAACAGAATATTAGTTCTCATATGATTACTGTCCATCTACAGGGGTTAGGATACGAAATTCGCTGCCGGTTATGTGAGAAAACTTTCACAACGGAGAGGAATTTAAAAAGACATATAAATCAATTGCATAATCCCGATGTTGAATATCCTACCTGCAATGATTGCCATAAAGTTTTTAAAGGGAAACATTCGCTTATAGCTCATATTCAATCAGTTCATAATATCAGCGAGAAAGACGCTATTAAATGCCACTTGTGCGAAAAAGTGTATACTAACAATAGGAACTTGAAAAGGCATATAGAAATGTTTCACGGTGTAAAGGGGGAGTTCCGGTGCGACATCTGCCCCAAAGTGTATACTTCGAATCAGAGTTTACGGCGCCATGCCCGAACGAGACACAATACTGATAATCAAGAACATTTAACGTGTAACTTTTGCATGAAAGTGATAATAGGACGCGAGAATTTCGAGAGCCATGTGCAATTTCATCACCAGGACACCGAAATGGATAACAAAAACGTGGAATACGTCTGCGAATCGTGCGGTCAAAGTTTCGATGAAGAACCTTTATTGCGCCAGCACGTCAAATCGGAGCATTCTTTTAAAACCTTCTACAAGTACTGCAAGAAATCCTTGCTGAAACAGTACGGGATGGACACACAAAACATATACAACTGTGAATACTGTGATAACTCTTTTTTAACGGTCTACGAGTTGAAAGATCATATGCGGGTGAACCATGATATAGAGTACTCTCTATCAACCTGCAATGTGTGCTTCAATAAGTTTTTCAGTCATGAAACGAGACGCGCACATAGGAACATCTGTCTACCGCCGCCAAACGTCAACACCTGCAGTTATTGTGATAAGTTATTCACTGATATATCTAGCTTAGAGTTCCATACGAGGATCTTTCATCCGCAATCTCAAATCGCAGACTCTAACATTTCATCAACGAATATTGATGAGGAGATCCTCTCATTTAAATGCGAGCATTGCGATCGCATTTACTACAGCGAGAGATCCCTCAAACATCATATTAAGCTAAAACATACGACGGATGAGGAAGTAGAATGCCAACTCTGCGGCAAAATCTGCAGCAACAAGTACTACTTAGCGTCGCATACAAAAATAGTCCATAACAACGACTCTTGGTCTCGCTGCGAATATTGTGATAAACAGTTTAAATCCAAAAGAAATATCCGAAGACATATTGAGTACACTCATTTAGGCATGCAAAGATACAAATGTATTGAATGCGAGACCTTGTTTAAAGAAAAACGGAGCCTAAGAAAGCATGTGCGGACGAAACACCCAAATTCTGCCGCATTCCCGCAATGCCATATTTGTCACAAACGGTTTGAATCTGCAAAATCTTGTAAGATACATTTGAAACTGTTGCATTCTTTCAATATGAACACATATCCTTGCCACTTATGTTCAGTGTCGTTTAGTTCCAACGAGGCTCTGACTATACATCTCGAAACGAAGCATTTAGCCGAAGATCAGATCTACAAATGCGAAGAGTGCAACTTGGTCTTCAAAGGGCAGGAAAAATTCGACGCTCACAACGAAGTTTGTCACGTCAATCTAGTCCCTACGATCAAGCAGAAAGTCCTACCGAGATGTATACTCTGCATGAAAGATTTTAGCACGCGAAAAACGTTGAAACGCCACATCAAAAAATTCCATGAAGAATTTGACGTAGATGAATTGGCGACTTTTGGATCTAGACGCAGAACTTTCACAGTCGATTGCGAAGACTGTATCAAGAATTTCAACGACGATTTTCATTTGAACGTCTATAACAAGCTGAAACATTTAAGGGACACTGAAATATTTAAGTGTCAAACTTGTTTCGAGTCCTACAATTCCCTAGAGTACGCTATACAAAGGTATAAACTGACGAACGCAGACGCTTGCAAATCCAAGATGATTCTAAGCGAGCTTTGCACAACTGAGATGAGCGAAGAAGAGAATGACTTCTCTCATTTTGGAGAGTTACATGACATGTTGCCTGAGAGCACGACAAGTGAACTTATCATCAAGTCGGAGCCTCTCGAAGATTCTGAGTCAGAGGTGAAGATGGAACCGGCTTCGCCGTAA
Protein Sequence: MYTNQLDYVCDYCSRTFTRKYNLQTHIENCHINSSCHCDICGQNFGSPAGLLQHLSRGHNNYGQPFPECELCGRIFTRKQNISSHMITVHLQGLGYEIRCRLCEKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNISEKDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHNTDNQEHLTCNFCMKVIIGRENFESHVQFHHQDTEMDNKNVEYVCESCGQSFDEEPLLRQHVKSEHSFKTFYKYCKKSLLKQYGMDTQNIYNCEYCDNSFLTVYELKDHMRVNHDIEYSLSTCNVCFNKFFSHETRRAHRNICLPPPNVNTCSYCDKLFTDISSLEFHTRIFHPQSQIADSNISSTNIDEEILSFKCEHCDRIYYSERSLKHHIKLKHTTDEEVECQLCGKICSNKYYLASHTKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALTIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNEVCHVNLVPTIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRTFTVDCEDCIKNFNDDFHLNVYNKLKHLRDTEIFKCQTCFESYNSLEYAIQRYKLTNADACKSKMILSELCTTEMSEEENDFSHFGELHDMLPESTTSELIIKSEPLEDSESEVKMEPASP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447464;
90% Identity: iTF_01535147;
80% Identity: iTF_01064883;