Basic Information

Insect: Noctua fimbriata
Gene Symbol: -
Assembly: GCA_905163415.1
Location: LR990949.1:7054261-7057249[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.004 0.36 12.3 1.3 1 23 5 27 5 27 0.93

2 15 0.0018 0.17 13.4 0.5 1 23 100 122 100 122 0.98

3 15 0.001 0.095 14.1 0.2 1 23 126 148 126 148 0.95

4 15 0.016 1.5 10.4 0.3 1 23 153 176 153 176 0.95

5 15 0.00073 0.066 14.6 2.7 1 23 182 205 182 205 0.93

6 15 0.038 3.4 9.2 0.3 1 13 212 224 212 227 0.84

7 15 0.085 7.8 8.1 1.5 1 23 346 369 346 369 0.95

8 15 0.064 5.8 8.5 0.2 2 23 394 416 393 416 0.94

9 15 0.35 32 6.2 0.1 1 23 440 462 440 462 0.92

10 15 8.7e-05 0.0079 17.5 0.2 1 23 466 488 466 488 0.98

11 15 9e-05 0.0082 17.5 0.5 1 23 493 516 493 516 0.96

12 15 0.0065 0.59 11.6 0.4 2 23 523 545 523 545 0.93

13 15 0.062 5.6 8.5 6.5 1 23 552 575 552 575 0.96

14 15 0.00011 0.0098 17.2 4.3 2 23 582 603 581 603 0.96

15 15 0.00012 0.011 17.1 1.7 1 23 609 631 609 631 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.004	0.36	12.3	1.3	1	23	5	27	5	27	0.93
2	15	0.0018	0.17	13.4	0.5	1	23	100	122	100	122	0.98
3	15	0.001	0.095	14.1	0.2	1	23	126	148	126	148	0.95
4	15	0.016	1.5	10.4	0.3	1	23	153	176	153	176	0.95
5	15	0.00073	0.066	14.6	2.7	1	23	182	205	182	205	0.93
6	15	0.038	3.4	9.2	0.3	1	13	212	224	212	227	0.84
7	15	0.085	7.8	8.1	1.5	1	23	346	369	346	369	0.95
8	15	0.064	5.8	8.5	0.2	2	23	394	416	393	416	0.94
9	15	0.35	32	6.2	0.1	1	23	440	462	440	462	0.92
10	15	8.7e-05	0.0079	17.5	0.2	1	23	466	488	466	488	0.98
11	15	9e-05	0.0082	17.5	0.5	1	23	493	516	493	516	0.96
12	15	0.0065	0.59	11.6	0.4	2	23	523	545	523	545	0.93
13	15	0.062	5.6	8.5	6.5	1	23	552	575	552	575	0.96
14	15	0.00011	0.0098	17.2	4.3	2	23	582	603	581	603	0.96
15	15	0.00012	0.011	17.1	1.7	1	23	609	631	609	631	0.98

Sequence Information

Coding Sequence: ATGAAAAATCTTTACATTTGcttctattgccatcaacagttTCCCGACCCTGCGTCACTGAGGCTACATAACACACAACATGGTTTTCTAACGACATCGCAAGTCAAATACGCTTTATCTAAGCTTAAGAAGTATGAATTAGTCAAAGTTGATATCACTGATTTAGGGTGCAAGCTCTGTGATGATTTAATCCCTGATTTTCCGTCTCTAAAGTGGCATCTACTGGAAAAGCATAACAAGAATTTGGATCCGAAATCCGGGGATGGTGTCTTACCGTTCAAAGTTACACTCAATGAATTCCCTTGCGCTCTTTGTACGGAAAAATACACGGAATTTAAATCCCTAAATCAGCACATGAACGTGCATTTCCAAAATTTCATTTGCGAGCAATGTGGTACAGGTTTTATAACTCCAGAACGTTTAAGAACCCACGCGTTCTCGCACGAGACAGGATCGTTTCCTTGTGAAAGCTGTGAGAAAGTATTCAGGTCCACTAACGCGAAAAACGAACATTACGCTACCGTTCATATGAAAGTAAAACGCCACAGGTGCCCTCATTGTCCAGAAGTATTCAGAAACTACtttcaaagaaacaaacataTTTCTGCTGTCCACGGTTTGAAGTTAAAGGAATTCAAATGCACTATGTGTCCTAAAGTTTTCACCATAAGTGGGAAATTAGGATTGGACTCCGAAATACCGGATGCGAAGCGAAGAATCATCCCGTTATTCCAAGTAGCTTACGACAGGAGTTTGTGTAGACCTCTTGGGTCATTGATGCCCTTCAGTAAACTCCGACAAAAGACTATTAGGACCTTCTCTTCACCTCCAAGAAATTTCTCTCCATCTCGCAGTCCTTCCCCTGTTTGCCAAGCTATTGCACCATCGCCTTTCATAGATAGTACACCGACTTTATCGGTCCAAACTGTAAAACCAAAAGAGCCTAAAGCTAAAAAAACTCCAGATATCAGACAGAATGCTTTAGCTGTGTTTGAATTTTCAACGGTTTATCCGTTCGTTTATGGGAGTaacaaatttaaatgttttgtttgctcTCAACCGTTTTTGGACTTGAATGAATTGAAGCTACATATGCACCTGTCTCATACCTTCGCTCCTTTGAAAAGACTGGTCAATAATCGAAGAGAAAATGTCTTGAAAGTCGATGTAAGTGAAATTACATGCAAGATATGTTCAGAAAAACCTTCTAGCCTGGTAGAACTCAAGCGTCATCTCAAAGAAGTACACGATAAGCCAATTGATTTAGAAATCCAAGATAATATGATCCCGTTCAATCTCGAGTTTGTAGACGATGCATACAAATGCGTCATATGCGAACAGAACTTCATAAAAGTGCGAATTTTAGTCATCCACATGAGTGAACACTTCAATAACTATAGCTGCGAGATTTGCGGATCAGTCTTCATGACTTTACGGCTTTTGAAGAAGCATTTAGAGGTCCATGACTCTGGTAACTTTCCTTGCGATCGCTGCAATAAAGTTTTCAGTACTCCTTATAAACGTACTTTGCATATACGAGGGGTTCACCTAAAGCAGTGTCCGAGAAGATGTCCAATGTGTCCGGAAAAATTTAACTCAAACTACAAAAGGACTATTCACTTGCAAGATGTCCATAATCAAGAGACTAGAGTACATAAATGCAAGACTTGTGGGCGAGGATTCAATCTGAAGTATCACTTAGTCTGCCACGTTCGTTCTGTTCACCTCCAGGAGAGGAATCAGCAGTGTGCTGTATGCCACCAACGGTTTTGTAACAAGGAGTCATTGAAACGTCATATGGTGATACACACTGGGGAAAAGAATCATAAATGTGATGTGTGTGGCATGGCGTTTTTGAGGAGGAAAAATTTGAAGGATCATCTGCGTTTGCATGATATTAGTTAG
Protein Sequence: MKNLYICFYCHQQFPDPASLRLHNTQHGFLTTSQVKYALSKLKKYELVKVDITDLGCKLCDDLIPDFPSLKWHLLEKHNKNLDPKSGDGVLPFKVTLNEFPCALCTEKYTEFKSLNQHMNVHFQNFICEQCGTGFITPERLRTHAFSHETGSFPCESCEKVFRSTNAKNEHYATVHMKVKRHRCPHCPEVFRNYFQRNKHISAVHGLKLKEFKCTMCPKVFTISGKLGLDSEIPDAKRRIIPLFQVAYDRSLCRPLGSLMPFSKLRQKTIRTFSSPPRNFSPSRSPSPVCQAIAPSPFIDSTPTLSVQTVKPKEPKAKKTPDIRQNALAVFEFSTVYPFVYGSNKFKCFVCSQPFLDLNELKLHMHLSHTFAPLKRLVNNRRENVLKVDVSEITCKICSEKPSSLVELKRHLKEVHDKPIDLEIQDNMIPFNLEFVDDAYKCVICEQNFIKVRILVIHMSEHFNNYSCEICGSVFMTLRLLKKHLEVHDSGNFPCDRCNKVFSTPYKRTLHIRGVHLKQCPRRCPMCPEKFNSNYKRTIHLQDVHNQETRVHKCKTCGRGFNLKYHLVCHVRSVHLQERNQQCAVCHQRFCNKESLKRHMVIHTGEKNHKCDVCGMAFLRRKNLKDHLRLHDIS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00822235;
90% Identity: iTF_00852078;
80% Identity: -