Nfim010071.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Noctua fimbriata
Gene Symbol
At2g30600/At2g30610
Assembly
GCA_905163415.1
Location
LR990928.1:1879141-1889735[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-25 8.8e-23 81.5 0.0 4 106 22 126 20 130 0.94

Sequence Information

Coding Sequence
ATGGCGGGAGTGCCTAGTGATTGGCAATTAGGATGCGTTGAAGTGAAGCAAAGAGGTGAATACCTTCTGAAGTCAGGGCAATGGTCTGATTGCACCTTCTTGGTGGGTGCTGAGCCAGACCAAGTAGTTATAGCTGGACACAAGCTGGTCCTGGCGATGGCGTCACCAGTTTTCGAAGCTATGTTTTATGGTGGTATGGCAGAGAGAAATGATCCCATACCTATATTGGATGTACAGCCTGAAGCTTTCAGGGCTCTGTTAGAGTATATATACACAGACAATATAAACATCAGCTCATTTGACAAAGCTTGTGAGTTGTGCTATGGAGCCAAGAAGTACATGCTGCCTCACCTTGTGAAGGAATGCACGAGGTATCTGTGGTCTGACCTGTATCCAAGGAATGCCTGCCGTGCCTATGAGTTTGCAAGGCTATTTGAGGAGAATGTGCTCATGGATAAGTGCATACAGATAATCAGCACAAACACTAAAGAGGTTTTAACTGACAGCAGTTTTGAGGATGTAGAACTGAATACTGTCATCACTGTCTTCTCCTTAGACCATTTGAATGTGGACAGTGAACTGGACCTGTTTGAGGCTGCCGTGAGGTACGCCAAGGCCCAGGATAAGCGGACTTCAGAGAGGAGTGTGTCTCCTCCTTCGGAGAATGGACCCCCTAATGAGAAGAGATCCAAGAGCCCTGGGCCTTCCACTTCCAAAGTGGTGAATGTTGAAAGCAGTGCGGAGAACAGCCCTGAAGCCATGATGGACACACAAAAGGCCAGTGATAGCTCCGACCAGCCCTTACCAGGACCGTCTGATGAAGGCAAGAAGAAACCCGACCCGAAGACAGACAAACCAACAATACGCTCCGTTATCGAAAAGATTCGCTTCCTGACCCTCACGCCTCAGCAGTTCGCAGAAGGGCCAGCCAGGTCTTCACTCCTAACGGAGTCCGAGGCCTTTGCCGTCCTCATGAACATACTGTCCAGTACCTCGGACGTGGCCATGCCTAGTGGCTTCTCAACCTGCAGGGTGCCGAGGAAACAGCTGATTGGGGATGGACCGTCCTCTAATATGGCTACGCTTACTGTAGACACTCCAAGCCCGGTGATGTTGGAGCAAGTGTTCGGTGCGCCGTCCAGCTACCTGCCGCCCTACCCCAGGCCCACGCGCCATGATGTCGGCGTCCGCCACTCCTCCATCGTCCACAACTCGAACCACTCTGGCCTGGGCGTCGAGCACCTGGACAGACACAGTAACGACTACAACAAGATATACTGCCAGAGACCCATCATCCAGCACACCGACTGCCTCAACACCTCCGTGTTGGACTGTTCCGTCACTTTCATGGTGGATAAGAACATCTGTCTGCTAGGAGTGCAGGTGCCGACCCAAGCCCCGAGCGAGGAGTCAGGAGTCTCGTGCGCGGTGGGCGGCGTGGGTGGCGGGGGCTCGTACTGCGAGCTGCTGTACGCGCACCTGCTGGACGCGGACGGCGCGCGCCTCACCTACACCCACTACACCAACCGAGTGCCCTTCCGCCACCTGCTCGACATCATGTTCAACCGCCCTGTCTACATACAGCGGAACAAGGTATACAAAGTGGGCATAGTATTCAACAAGGTGGGCTGGTACCCCATGGGCACCTGCGCGCAGCAGGTAGCCGCGGAGTCAGTATTCTTCAACTTCGGGATAGGCCAGAGCTCTGACTCGGTCCGGGACGGCCTCATACGCTCCATCATCTTCACCTACTAG
Protein Sequence
MAGVPSDWQLGCVEVKQRGEYLLKSGQWSDCTFLVGAEPDQVVIAGHKLVLAMASPVFEAMFYGGMAERNDPIPILDVQPEAFRALLEYIYTDNINISSFDKACELCYGAKKYMLPHLVKECTRYLWSDLYPRNACRAYEFARLFEENVLMDKCIQIISTNTKEVLTDSSFEDVELNTVITVFSLDHLNVDSELDLFEAAVRYAKAQDKRTSERSVSPPSENGPPNEKRSKSPGPSTSKVVNVESSAENSPEAMMDTQKASDSSDQPLPGPSDEGKKKPDPKTDKPTIRSVIEKIRFLTLTPQQFAEGPARSSLLTESEAFAVLMNILSSTSDVAMPSGFSTCRVPRKQLIGDGPSSNMATLTVDTPSPVMLEQVFGAPSSYLPPYPRPTRHDVGVRHSSIVHNSNHSGLGVEHLDRHSNDYNKIYCQRPIIQHTDCLNTSVLDCSVTFMVDKNICLLGVQVPTQAPSEESGVSCAVGGVGGGGSYCELLYAHLLDADGARLTYTHYTNRVPFRHLLDIMFNRPVYIQRNKVYKVGIVFNKVGWYPMGTCAQQVAAESVFFNFGIGQSSDSVRDGLIRSIIFTY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01063891; iTF_01532251; iTF_00685599; iTF_00823169; iTF_00973922; iTF_00772156; iTF_01260258; iTF_00327203; iTF_01076676; iTF_00157349; iTF_01342351; iTF_01075645; iTF_00449317; iTF_00622979; iTF_00375461; iTF_01118470; iTF_00850919; iTF_00017480; iTF_00018306; iTF_01377637; iTF_00177321; iTF_00171979; iTF_00186411; iTF_00185451; iTF_00869804; iTF_00041037; iTF_00147661; iTF_00831376; iTF_01285696; iTF_00000467; iTF_00001304; iTF_01117492; iTF_01230772; iTF_00785333; iTF_00794806; iTF_00707118; iTF_00924918; iTF_01095091; iTF_01093270; iTF_01363254; iTF_01362522; iTF_01361789; iTF_00784536; iTF_00783669; iTF_00851960; iTF_01440225; iTF_00300386; iTF_01062018; iTF_00952835; iTF_01031267; iTF_00302276; iTF_00712068; iTF_01064804; iTF_01026469; iTF_00445350; iTF_01028457; iTF_01340361; iTF_01534090; iTF_01533211; iTF_00907179; iTF_00726594; iTF_01526211; iTF_00037959; iTF_00906312; iTF_00038986; iTF_00036971; iTF_00364180; iTF_00908059; iTF_00928846; iTF_01030382; iTF_00042799; iTF_00071637; iTF_01247256; iTF_01192857; iTF_00122555; iTF_00301339; iTF_00888412; iTF_01084413; iTF_01085536; iTF_00173214; iTF_00446366; iTF_01029407; iTF_00123520; iTF_00121598; iTF_01502232; iTF_00273753; iTF_00810249; iTF_00822105; iTF_01332954; iTF_00383847; iTF_00072220; iTF_00809308; iTF_01535068; iTF_00043709; iTF_01027485; iTF_01359001; iTF_01119517; iTF_00425593; iTF_01425242; iTF_00274555; iTF_00040030; iTF_00111807; iTF_00636639; iTF_00909000; iTF_01166859; iTF_00450304; iTF_01339071; iTF_01360832; iTF_01197925; iTF_00824016;
90% Identity
iTF_01064804;
80% Identity
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