Nfim001413.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Noctua fimbriata
Gene Symbol
ab
Assembly
GCA_905163415.1
Location
LR990921.1:1133681-1141948[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-28 1.9e-25 90.1 0.0 1 99 22 116 22 122 0.95

Sequence Information

Coding Sequence
ATGGCTGTTCCCGAGCAGTTCTCGCTTCGGTGGAACGATTTCCATTCGAATTTATCACAATCATTTCATGCGTTGCTGGAGGGCGAAGACCTAGTGGATGTGACTTTGGCAGCCGGAGGGCAGTACGTGCACGCTCACAAGCTGATCCTCTCAGTATGCAGCCCTTACTTCAAGGAGCTTTTTAAGATGAACCCGTGTGAGCATCCCATAGTGATTCTCAAGGACGTGGCACACCAAGAGTTACGTCAGCTGCTGCAGTTCATGTACCGCGGTGAAGTGCACGTGCGTCGTCAGGAGCTGTCTGGCTTTCTCCACACTGCTGAACTGCTGCAGGTCAAGGGTCTGACTGGTGGTAGGGAACGAAGCGAGTCTCCGTCAGCCATGCCGGACGAGGTGCCAAAGCAGTTGCCGTCGCAGCCGGAGGTGGTCGAGCCAGTCAACGAGTGGACTCCAGTGGTGGAAGACACTACGTCTTCAGAGCCGCCACCAGAGCTAGCTGACCCGGTCACTATCAAGGAGGAGGCAGCTAGGAGCCCTCTCAAGAGATTACTGAAGAACACCCCGACTAAGAACAGCCACAATATGAAGAAAAAGCCGCGTCCCATCAAGGACAGCCCCACGCACCCGGAGAACACTGACTATGCTTACGACGGCGAGCCGCTGATTGACTTCGACAACGAGCTGTTCCACAGCGTGCTTGTGCTGCCCGAGTCCGCCAAGGAATCTGGATGGAACTGCAAGACGGGCGGCGTGAAGTGCCCCTCCTGCCACCGGTTCTTCGCCAACCGCTACAACCTGAAGGTGCACATCCGCGACAAGCACGATACTCGTGAGGGCACGCTGCAGTGCGACATCTGCCAGAAGCGCATGCGCAACCCCAGCTGCTTGCGCGTGCACATGTACCACCACCGCAAGCAGGCCGCTTATCTCGCTCAGCTCAGCTCGCAGGGGGAGCAGATGAAGCATGTTGTGCAGAACATGGTGGGAGGCAAGTGGCGCTCCGACTCGTCAGTGAGCAGCGGGGATTACAAGGATGTGGATAAGTGA
Protein Sequence
MAVPEQFSLRWNDFHSNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFKELFKMNPCEHPIVILKDVAHQELRQLLQFMYRGEVHVRRQELSGFLHTAELLQVKGLTGGRERSESPSAMPDEVPKQLPSQPEVVEPVNEWTPVVEDTTSSEPPPELADPVTIKEEAARSPLKRLLKNTPTKNSHNMKKKPRPIKDSPTHPENTDYAYDGEPLIDFDNELFHSVLVLPESAKESGWNCKTGGVKCPSCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHMYHHRKQAAYLAQLSSQGEQMKHVVQNMVGGKWRSDSSVSSGDYKDVDK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01063363; iTF_00018657; iTF_00018292; iTF_00383829; iTF_00384216; iTF_00017465; iTF_00017822; iTF_00951964; iTF_00952346; iTF_01173405; iTF_01173825; iTF_00237889; iTF_00745925; iTF_00238350; iTF_00746355; iTF_01166850; iTF_00637089; iTF_00281922; iTF_00707106; iTF_00405572; iTF_00707494; iTF_00636679; iTF_00795337; iTF_01197961; iTF_00282986; iTF_01152303; iTF_00405136; iTF_01167253; iTF_00281558; iTF_00637816; iTF_01152696; iTF_00157337; iTF_00282554; iTF_00157691; iTF_00908988; iTF_00794878; iTF_00638303; iTF_01198304; iTF_00933235; iTF_00932778; iTF_01492188; iTF_01492531; iTF_00909398; iTF_00889376; iTF_00889765; iTF_00784036; iTF_00784838; iTF_00783658; iTF_00784526; iTF_01426029; iTF_01426345; iTF_00445742; iTF_00446355; iTF_00445339; iTF_00446749; iTF_00785326; iTF_00785666; iTF_01119882; iTF_00112163; iTF_01117477; iTF_01117902; iTF_01119502; iTF_00111792; iTF_01118457; iTF_01118875; iTF_01193263; iTF_01192845; iTF_01440623; iTF_00036961; iTF_00364546; iTF_01526659; iTF_00121029; iTF_00374341; iTF_00623653; iTF_00831365; iTF_01094181; iTF_00906694; iTF_00037415; iTF_00071624; iTF_00122984; iTF_01441576; iTF_01527464; iTF_00364169; iTF_01095082; iTF_01441226; iTF_01527914; iTF_00425580; iTF_00924908; iTF_01093260; iTF_01095502; iTF_01286062; iTF_00425999; iTF_00758799; iTF_01093679; iTF_00122544; iTF_00908048; iTF_00071953; iTF_00124817; iTF_00374802; iTF_01094546; iTF_00039411; iTF_00668084; iTF_00038326; iTF_00375446; iTF_00831766; iTF_00908438; iTF_00375895; iTF_00622967; iTF_00667671; iTF_01285687; iTF_01440216; iTF_01526202; iTF_00907515; iTF_00037948; iTF_00124413; iTF_00758397; iTF_00038974; iTF_00906302; iTF_00120703; iTF_00907167; iTF_00925375; iTF_00043697; iTF_00044101; iTF_00148113; iTF_00147651; iTF_00121587; iTF_00121990; iTF_00123863; iTF_00123509; iTF_00726586; iTF_00726962; iTF_01026460; iTF_01026927; iTF_01031599; iTF_01535055; iTF_00042787; iTF_00928835; iTF_00040420; iTF_00042276; iTF_00041926; iTF_01063880; iTF_01065192; iTF_01064270; iTF_00712495; iTF_01532239; iTF_01533583; iTF_00043120; iTF_00685968; iTF_01062384; iTF_01533201; iTF_00040020; iTF_00685589; iTF_01062006; iTF_01535479; iTF_00447385; iTF_00712057; iTF_00929209; iTF_01064793; iTF_00447803; iTF_01532668; iTF_00786417; iTF_00786117; iTF_01425233; iTF_01425611; iTF_00823154; iTF_00823569; iTF_01361778; iTF_01362159; iTF_00173811; iTF_00173202; iTF_00772147; iTF_00772526; iTF_01377620; iTF_01378024; iTF_00345941; iTF_00346375; iTF_00450646; iTF_00450337; iTF_01085526; iTF_01084774; iTF_01084402; iTF_01085945; iTF_00300375; iTF_00851329; iTF_00974273; iTF_00888835; iTF_01030372; iTF_01230761; iTF_01030762; iTF_00851948; iTF_00953165; iTF_01029781; iTF_00973910; iTF_01029399; iTF_01031257; iTF_00952826; iTF_00850907; iTF_00852316; iTF_01231196; iTF_00300799; iTF_00888447; iTF_00172379; iTF_00171972; iTF_00709819; iTF_00709382; iTF_00302268; iTF_00302689; iTF_01073724; iTF_01074090; iTF_00810237; iTF_00810637; iTF_00809298; iTF_00177715; iTF_01539255; iTF_01538904; iTF_00177310; iTF_00809695; iTF_01028446; iTF_01028852; iTF_01260638; iTF_01260249; iTF_01340350; iTF_01340794;
90% Identity
iTF_01538904;
80% Identity
iTF_01063363;