Basic Information

Insect: Noctua comes
Gene Symbol: -
Assembly: GCA_963082995.1
Location: OY720297.1:6266391-6284060[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.7 1.3e+02 3.9 0.3 5 21 304 320 302 321 0.92

2 14 0.019 1.4 10.1 0.2 1 23 332 355 332 355 0.94

3 14 0.0045 0.35 12.0 3.3 2 20 393 411 392 413 0.93

4 14 2.1 1.6e+02 3.7 1.1 1 23 418 440 418 440 0.94

5 14 0.68 52 5.2 1.3 1 20 673 691 673 693 0.89

6 14 1.1 84 4.5 7.2 1 23 705 727 705 727 0.96

7 14 1.2 91 4.4 0.2 2 23 733 754 732 754 0.96

8 14 1.2 93 4.4 1.1 1 23 777 798 777 798 0.91

9 14 0.00094 0.072 14.2 0.2 2 23 875 896 874 896 0.97

10 14 5.4e-07 4.1e-05 24.4 2.7 1 23 902 924 902 924 0.99

11 14 2.7e-05 0.0021 19.0 0.3 3 23 931 951 929 951 0.96

12 14 0.0075 0.57 11.4 1.2 2 23 958 980 957 980 0.96

13 14 2.1 1.6e+02 3.7 0.3 1 20 987 1006 987 1010 0.89

14 14 0.00083 0.063 14.4 1.0 3 23 1019 1040 1018 1040 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.7	1.3e+02	3.9	0.3	5	21	304	320	302	321	0.92
2	14	0.019	1.4	10.1	0.2	1	23	332	355	332	355	0.94
3	14	0.0045	0.35	12.0	3.3	2	20	393	411	392	413	0.93
4	14	2.1	1.6e+02	3.7	1.1	1	23	418	440	418	440	0.94
5	14	0.68	52	5.2	1.3	1	20	673	691	673	693	0.89
6	14	1.1	84	4.5	7.2	1	23	705	727	705	727	0.96
7	14	1.2	91	4.4	0.2	2	23	733	754	732	754	0.96
8	14	1.2	93	4.4	1.1	1	23	777	798	777	798	0.91
9	14	0.00094	0.072	14.2	0.2	2	23	875	896	874	896	0.97
10	14	5.4e-07	4.1e-05	24.4	2.7	1	23	902	924	902	924	0.99
11	14	2.7e-05	0.0021	19.0	0.3	3	23	931	951	929	951	0.96
12	14	0.0075	0.57	11.4	1.2	2	23	958	980	957	980	0.96
13	14	2.1	1.6e+02	3.7	0.3	1	20	987	1006	987	1010	0.89
14	14	0.00083	0.063	14.4	1.0	3	23	1019	1040	1018	1040	0.96

Sequence Information

Coding Sequence: ATGGCCGATACATCCAGGAAAAGGTCGAGGAAATCGAAGTTAGTGCCTCGTGAGTGTGCTGTGTACGAAGATGATCTTGAATTGCAGCTTCCAGTGGCGAAAATACCTAAAAAGCCTATCCCACCTATCGTTAAACagaaaacaactaaaaaactatttaaagaACCACAACTTATCATTAAAAAACTAGAAGAAACAACTATTTCAACAACTCAAGAAGTTGACACAAGCGTTCTAAGAAAAATCAACGCATCGTCAGCTAAAGAAGAAATCgaaccaaaaataaaagaatcacCAAGAAAATTCGAGATTAATATTGAGGTGGAATCttgcgatgatgatgatgacgaattcGCTAGCATTAGAGTCGAAAATGAATTGACACCAGCTAAAGACGTACTCAGTACAAAGACTCATGTAACACCTATATCGCTCTCTCGAGAACACATACTTGATGAAGCTGACAACATACTAGAAACTTCGACAAAGGTCGCTGATAAGATCTTAGACATCTACCTAAGGAATACGATTGGCTAtgaacagaaagcaaagctgaAGAACGAGGggtttgaaaatcgaatccaggCAGCATTAGACGAGTGGAAGATATGGCAGTTCCGCAGTTTCCACAGAGAAGATCCTCTATTCTACAAATGTTACATCTGTACTAGATCCTGGTGGCTTCTATCTGACTTCCGCAACCATCTGTCTTCAGCTCACCCAAATGACAATATGATCAAGATTGTTTTGGAGAAGTATGAAATGCATGAGGCTAATTTAATAGCGTACCACGAAAGGCTCGTTGTGGTTAAAGACATATACACTGAAGGTCTTTGTCACCGTTGCGGCAAAGACTATGCTGCTCATGAATTAGAAGACAGATTTGAGCAAAAGTATTACAAGAACAAAGGATGCTCTAAGCAATTTTTTACTTGCATGGGTCTAAGGGATCATATACAGTCTTGCCCTATATGTAAAATAGAGGATAAGCCATACAAATGTGACATTTGTAAGTCAAGATTTGACACAGAAGTTGAAGTGACAAATCATTTAGTGATATCTCACTCAGTTCGGTCTGATATACCAATCATGACACACAATAACGACTGTAAGAGGTGTtctgaaaaatatatttgtagatTCTTGCACAAATGTTGGCAACAAGTCCCTCATTGTGAATGCCCTCATTGCTTCAGAACATTCTCAAACACCATGTCCTTAGAACTCCATATGGAGCATTCGAATATACCTTATGAATGTGAAGTTTGCGACGTAGTGATGAGGTATAGCTGCAAGAAGTTCGAGCATATGTTGATTCACACCGACAAGTATATGGCAGTCAGGAAGTGTGATAAATGTAAGGGCCTGAATGTTTTTCTGAGCAATGATGATGCTGCAGCTCATTCGGAAATGGAACATGAGTCAGAGGATACGCAACAACAAATATATTTTCCCAAACTTATAGTACCATCGACCTGCGTATATAAAAGCTTAGCGGAATCTGAAATGGCAGAACAAGAAGAGCTGGCAGAAGAACAAGAATCGGTtctgaaagaagaagaattggtACCAGCATATGAACAGAGACAGGACTTGCAAGAATCAACAAAAGACTTTATGATGAATGATGTCGTTGTCAAAgAAGAGCCAATAGACTACGAAGACAGCCCAAGACTTATAATTAAAGAAGAACCCTTAGACGAAGCAGAAAGCCAAatacaagacgaagaaaatgaAACAGACAACTTTGAACACCAAATAACCGTGAAAGAAGAATTTATTGAAGAAGAAATAGACGTAGAAGACGAATATGATGGAGACATAATAAAACTCAACTTTAACATCGAAGACTTGTTGGTGAAGCAAGAATCTATAATAGATGAAGGAGAAGAATATGCTCAACAGCAAACAGAAGATGAAGATTCACAAGACTTTCCTCGACcggtaaaagaagaagaatctaTCTTAGAACCAGAAGTTATCATCCGAAGAGGtggtaaaaagaaagaaaacaaataccGATGCACAAAATGTGGCTTTACAGCGAACCATAAACAGTACAGAGCTCATATCGAGTTTGACTGTCTCAAGAACCCGATCAAACATAGAGACTACTTCTGTTCAAAGTGTAATTGCACGTTTAGTACCATGAAGAAATATTTGTCCCATTTTGAAAAGCATGGGTACCAACATAAATCATGCCCCGAGTGTCTGAATAAATTTGAAAACTACTCGATTCTAGCTTCACATGTGCAGTCGCATATTAAACAGAATTTTGTGCGAGTGAAGATGATTACGTATGCagGTAAAGCAATGACAAAACCTGACTTCCAATGCAAGAAATGCACCGAAACGATTTCTTTGAGCCAATTCTTTGAACACTGGGAGCTACATATTAACGCCCAGCCCACGCACCCTATAAAAGTGACATCTAGGCCTCCGCTGAAACGGGGAGAACTTCATGAAACTATTATAAAGGAGTGCATTGCCCGGCTCCATAAAACTCCAAAAGAATGCAACCATTGCCACCGTTGGTTCAAGCGCGTCAACGAATGCAAGAGACACATCATTGAACACCTCCTAGTGGACGCTTACAACCAAAAGCACATATTCCACGAGCTCAAATGCCAAATATGTGAAACTGGCTTCGCTGTGCCGGAGAAATACAAGCAACACATGCGAGATCATGCGTCTCTACCCGTCTATAAGTGTGAATTGTGTGATAGGACATTCAGTGACTCAAGTAACTTTACCAAACATAAAAAAGTGCATAATTTGAGAGTGATTATTTGTGATTTATGCGGCAAGAAGTTCCAGTCTAAGGTGTCTTTAGAGAAGCATATTGAGAAACATAAAACCACCGCGCCGATCACTTGCGAGCTTTGCAGCAAAATCTTCTATTTCGACACATCATATCGGCGACATATACGTTACTATCATGAAAAGACCACACATGGATTCCGCTGCATAAACTGCGGACAACGATTCAACAGCTTAAAGGCCAAATGGGACCATATGTGGAGTGTCCACAAGGAACGAAAGCAAAAAGCCGACTGTCCGATATGCCACGAATCTTTTAGAAAATTTTCCGATGTCCGCGCTCATGCTAGGAACAGTCATTTAATGGAGGTTTCCGTGCTAAGTGTCAAAAAAGCGAGCAATAAAGCGGTTAATGTAGATAAGTTTCTGAGTGATGCGACGACTATCAGAGTCGGTAGATCAGAGACTTTGGTTGTCTTTGATTCTGATTAG
Protein Sequence: MADTSRKRSRKSKLVPRECAVYEDDLELQLPVAKIPKKPIPPIVKQKTTKKLFKEPQLIIKKLEETTISTTQEVDTSVLRKINASSAKEEIEPKIKESPRKFEINIEVESCDDDDDEFASIRVENELTPAKDVLSTKTHVTPISLSREHILDEADNILETSTKVADKILDIYLRNTIGYEQKAKLKNEGFENRIQAALDEWKIWQFRSFHREDPLFYKCYICTRSWWLLSDFRNHLSSAHPNDNMIKIVLEKYEMHEANLIAYHERLVVVKDIYTEGLCHRCGKDYAAHELEDRFEQKYYKNKGCSKQFFTCMGLRDHIQSCPICKIEDKPYKCDICKSRFDTEVEVTNHLVISHSVRSDIPIMTHNNDCKRCSEKYICRFLHKCWQQVPHCECPHCFRTFSNTMSLELHMEHSNIPYECEVCDVVMRYSCKKFEHMLIHTDKYMAVRKCDKCKGLNVFLSNDDAAAHSEMEHESEDTQQQIYFPKLIVPSTCVYKSLAESEMAEQEELAEEQESVLKEEELVPAYEQRQDLQESTKDFMMNDVVVKEEPIDYEDSPRLIIKEEPLDEAESQIQDEENETDNFEHQITVKEEFIEEEIDVEDEYDGDIIKLNFNIEDLLVKQESIIDEGEEYAQQQTEDEDSQDFPRPVKEEESILEPEVIIRRGGKKKENKYRCTKCGFTANHKQYRAHIEFDCLKNPIKHRDYFCSKCNCTFSTMKKYLSHFEKHGYQHKSCPECLNKFENYSILASHVQSHIKQNFVRVKMITYAGKAMTKPDFQCKKCTETISLSQFFEHWELHINAQPTHPIKVTSRPPLKRGELHETIIKECIARLHKTPKECNHCHRWFKRVNECKRHIIEHLLVDAYNQKHIFHELKCQICETGFAVPEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLRVIICDLCGKKFQSKVSLEKHIEKHKTTAPITCELCSKIFYFDTSYRRHIRYYHEKTTHGFRCINCGQRFNSLKAKWDHMWSVHKERKQKADCPICHESFRKFSDVRAHARNSHLMEVSVLSVKKASNKAVNVDKFLSDATTIRVGRSETLVVFDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01063304;
90% Identity: iTF_01063304; iTF_01064235;
80% Identity: -