Basic Information

Insect: Nineta flava
Gene Symbol: L
Assembly: GCA_963920215.1
Location: OY986046.1:12823725-12837181[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 3.5e-05 0.0013 19.6 1.4 1 23 87 109 87 109 0.98

2 22 0.32 12 7.2 4.2 1 23 115 137 115 137 0.98

3 22 4.4e-06 0.00017 22.4 4.0 1 23 143 165 143 165 0.99

4 22 0.00032 0.012 16.6 0.2 1 23 171 193 171 193 0.98

5 22 0.015 0.55 11.3 0.1 3 23 273 294 272 294 0.92

6 22 4.8 1.8e+02 3.5 0.1 3 23 323 344 321 344 0.89

7 22 0.0017 0.062 14.3 2.0 2 23 398 420 397 420 0.96

8 22 0.28 10 7.3 0.3 3 22 428 447 427 449 0.88

9 22 0.58 22 6.3 0.1 3 23 519 539 518 539 0.98

10 22 0.01 0.38 11.9 8.1 2 23 574 595 573 595 0.96

11 22 4e-05 0.0015 19.4 0.6 1 23 603 626 603 626 0.93

12 22 1.3 49 5.2 0.2 1 23 631 654 631 654 0.91

13 22 4.6 1.7e+02 3.5 2.7 1 23 708 730 708 730 0.98

14 22 6.2e-05 0.0023 18.8 0.4 1 23 734 757 734 757 0.96

15 22 0.019 0.71 11.0 4.4 2 23 854 875 853 875 0.96

16 22 0.024 0.89 10.7 0.6 1 23 885 907 885 907 0.98

17 22 7.4 2.8e+02 2.8 2.1 3 23 916 936 915 936 0.95

18 22 5.3 2e+02 3.3 0.1 1 23 956 978 956 978 0.94

19 22 0.027 1 10.5 4.1 1 23 1074 1096 1074 1096 0.96

20 22 0.034 1.2 10.2 0.4 1 23 1104 1126 1104 1126 0.97

21 22 4.7 1.7e+02 3.5 1.8 1 23 1133 1156 1133 1156 0.93

22 22 0.062 2.3 9.4 6.7 1 23 1177 1200 1177 1200 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	3.5e-05	0.0013	19.6	1.4	1	23	87	109	87	109	0.98
2	22	0.32	12	7.2	4.2	1	23	115	137	115	137	0.98
3	22	4.4e-06	0.00017	22.4	4.0	1	23	143	165	143	165	0.99
4	22	0.00032	0.012	16.6	0.2	1	23	171	193	171	193	0.98
5	22	0.015	0.55	11.3	0.1	3	23	273	294	272	294	0.92
6	22	4.8	1.8e+02	3.5	0.1	3	23	323	344	321	344	0.89
7	22	0.0017	0.062	14.3	2.0	2	23	398	420	397	420	0.96
8	22	0.28	10	7.3	0.3	3	22	428	447	427	449	0.88
9	22	0.58	22	6.3	0.1	3	23	519	539	518	539	0.98
10	22	0.01	0.38	11.9	8.1	2	23	574	595	573	595	0.96
11	22	4e-05	0.0015	19.4	0.6	1	23	603	626	603	626	0.93
12	22	1.3	49	5.2	0.2	1	23	631	654	631	654	0.91
13	22	4.6	1.7e+02	3.5	2.7	1	23	708	730	708	730	0.98
14	22	6.2e-05	0.0023	18.8	0.4	1	23	734	757	734	757	0.96
15	22	0.019	0.71	11.0	4.4	2	23	854	875	853	875	0.96
16	22	0.024	0.89	10.7	0.6	1	23	885	907	885	907	0.98
17	22	7.4	2.8e+02	2.8	2.1	3	23	916	936	915	936	0.95
18	22	5.3	2e+02	3.3	0.1	1	23	956	978	956	978	0.94
19	22	0.027	1	10.5	4.1	1	23	1074	1096	1074	1096	0.96
20	22	0.034	1.2	10.2	0.4	1	23	1104	1126	1104	1126	0.97
21	22	4.7	1.7e+02	3.5	1.8	1	23	1133	1156	1133	1156	0.93
22	22	0.062	2.3	9.4	6.7	1	23	1177	1200	1177	1200	0.98

Sequence Information

Coding Sequence: ATGCTATTTAAGGGTAACAGTAGTCGATTAGAGTTGTTGATTGGAAAAATTCAGGCGAATAATAATCATCAGTTTTCTGCATTCATGAAAAAagATACATTGGGAACAGAATCTGGTGGGGGTAGTTGGCAATCCGATAATGGGGATGAACCACGAACTCCACCCACACCAGCATCATCATGTCCAACACCAAATTCAAGTAGTGACTTACCTGAATCGGAATTGGTGTTCACTGTTGGAGTCACCGAATCCACGCCATATCCATGTCAATTCTGTACGAAAGCATTTCCACGTTTGAGTTACCTAAAAAAACATGAACAGACGCACAATGATAAGATGCCATTCAAATGTGAATTCTGTTCacgattattcaaatataagcGATCACGTGACCGACATATTAAATTACATACAGGCGATAAAAAATATCGTTGTACACATTGCGAAGCTGCTTTTTCCAGAAGtgaccatttaaaaattcatttacgcACGCACGATAACGGTAAACCATTCCAATGTGTGACATGCAATCGAGGATACAACACGGCTGCAGCACTGACGTCCCACATGCAAAATCATAAGAAACAGCAACgtcaacaacagcaacaacagaTGGGAGTGGGTGTACCGCCAACATCCACGCCAGCAGCGGTGTCGTGCATTGATTTGACACGACAATCTAACGAAATATCAACCACAATTTCTGTGACATCACCACAATCGCCCTTACGAATCGCTACGGCACCCGTTACATCATCCGCTTTAACGACAGTGGTGCCTGCAACTTCAATCACTGCATCATCCGAGACTAATAATTGCTCACATTGTGGTGAAGTTCTGGAATCGGCGGTACTTTTACAGaaACATATCGCGGCATACCACCAACAAGATCCACAAACCAAGGAAAAATCACCAACCCCCTTAATAGTAACAAAAGAAGAAACACCGCCCAATGTGACGTTAGTCTGTATTTACTGTTCCGAAGATTTTCAAACAATGGACGAATTAAAACTACACGTCGATGTGAAACACTACACAATGTTAAATGGTCTAACATCTTCAGCGTCCCGAGTTCAAACTCCTGTACCAATTTCTGCCCCGCTATCGTCATCCTCATCAAACATCCAACACAATTCACCGCCCCTACTCAACTATCATCTACATTCGCCCGTAATCGATAGTCCCAAATTGGTCTGTCACATCTGCACAATCCAATTCTCAAATCCACAAATGTTTCAACACCATCTGTTGACAGTGCATCGTAACATGTATCAAAATATTTGCCCCTATTGTGCTCAACAATTTGAGACTCGCGATCAAATGACTGAACACTTTTTTCAAGTACATCAATCGGAGCAAATCAAACCGACGGATTTGAGTAAGAAGACATCATTGAATGAGTCCGCGCATGACACATATGGAGCGAAACGGTTTAAGAAAAATATGGAATCCACAAATATTTATGCCAATAATATCGATACAATATCAACACCGTTATCACGAACTTCCAGTTCGTCCACGCCGAATCCATTGGATATGCCAAACACTCTGTTGTGTAGTCAATGTGACGCAGCTCTACCCGATTTTGAATCATTTCGTATCcacttaaaaatacatttagaacatggaggtgatggaattCGATCGATGTTCGAGCACACGAAACAATTCCCGCCGAATAACCTATTGAATGATATCCTGAAAACGTCGTACATGCTGTCTTGTCCACATTGCACGCAAATTTTTAAGGATCATCATACTCTGGAAAAACATATTTGTTCACATTTTCTGGCCGCAGTTACAGAATACAATTGCAAAACATGTGCGAAAAGTTTTACGAATGCCGATGACTTGCAAAAACATTTATTGGATTCGCATGCGCAGCATGTCTTTCGATGTTCGCTATGTAAGGAATTATTTGAGTCACGCGTTGCAATACAAGTACATTTTGCGGTCAAACATAGTGGCGAAAGTCAATTATTCCGTTGTGTGATGTGCCCGAATGATGTACGATCTGTATTTCGTACGGAAAAATCTGGCAAAATTCATATACGCTCAAATCATAGCGCTAATTTATTACCGACAATTGTATCGCCATCTGTTGCCAACACAACTAAACAATATCGTTGccatttttgtttgaataaataCGATTCAGAAATTGAATTTCAATTGCATTTAACGATGCATTTTCAACCGTACAAGTGCCCAATTTGCCAAAAGATTTTCCAAGTGGAATATTTGTTGGAACGGCATATGCAAGATTATCATCAGTCTACGAATCAAGTTTCCTCAAATGGTGGCTCAACACAAATTGATGAGACCTACGATCAAAAAAGCTCAACATCCTCtcatttcaatacaaaaatcaagAATCTATCCCACGAAACCGCCCAGAAAGAAACcttaaattgtataaaactaGAAACACCCGACTATAAAGTGAACATATGCGATTTATGCGATCGTAACGATTTCGCAAATGAAACCGAATTAGTTGCCCATCGTAAATTAGTCCATCATATGAAATCCACATCGAAAAATGGCGTGGTTAGTTTACATTGCGCCTACTGTAACGAAAATTGTAAGTCCCGGACCGAATTGGAAAGTCACATGAAAAATCATTCACAAAGCAGTGGCGTTTCCGgtaaacataaatgtaatatatgtgaTGAATTATGTCCTTCGGCTGCTCTTTTAGCCGAACATAAGCTGACACATTGTAAAGTGGTGTCAGGGAATTGTTGTACCCAATGTAAGGCGACCTTATCGACTGACGATCAGTATTACACGCATTTAATTCAACATTCGACCGCCGCGGGGAattcaaataacaataataatagtgGACAGATAGCGTTACCATATCCGTGTGTGATTTGTCGACAGACGTTAATCTCGAATATCGAAGTACGTATGCACGCCCAATTCCATATACGAAACATCTTATCGACATCATCCACAAACGAATTCCAATGCATACTCTGCCTAAAATCGTTAGATAAATCGAAATTAATATCCGGTGGTGGGGCTATTTGTAAGGATTGTTTTATCCAACATAGTTATAACCTCGAAAAAACGTTACATCAACAATCGACAATTGACGAAAAGCAACAAAAATTCGCATGTATTCGATGTCAATTGAATTTCGATACAGAACTCGAAATCCAGAATCATATAACGACCCACTTAAACGAATCCACGAATTCACAATTCCAACACGAGTGCCATCTGTGCCGGAGTAAATTCTCGAATTCGTATAAATTACAAATCCATTTAATCGAACATACATTCGCCGGATTCGGTAGTTTCACCTGCTATCTATGTTCGGCCGTGTTTACGGGGGCACAAGGCTTGCATTCACATATGTTGGAGCACGGTTTAACGAATCGTCCGTATGATTGTCAGAAATGTTCGTCACGGTTCTTTTTCCGTGCCGAATTAGATAATCATAGTTATACGTTGCATCAATCTTCGGCCGAGAGTAATAATAGTGCGCCGAATGTTACAGACAGTTACAGACAACATTATCAATGTACAGATTGTCATTTAGATTTTCATCAGTTGGAACATTTCATGAATCATACAAAATCGGTTCATGGCAATGATTTAACGGAGAAGAGTCTGAAGAATGCACCGTGTTCGGTGTCTTCGGATAATGAATATATTGAGGTTGGCGGTTCACCACATTCGTCAAATCGTGTTTTAGTTGAATCGACAACCGTTGCTAATAGTTAA
Protein Sequence: MLFKGNSSRLELLIGKIQANNNHQFSAFMKKDTLGTESGGGSWQSDNGDEPRTPPTPASSCPTPNSSSDLPESELVFTVGVTESTPYPCQFCTKAFPRLSYLKKHEQTHNDKMPFKCEFCSRLFKYKRSRDRHIKLHTGDKKYRCTHCEAAFSRSDHLKIHLRTHDNGKPFQCVTCNRGYNTAAALTSHMQNHKKQQRQQQQQQMGVGVPPTSTPAAVSCIDLTRQSNEISTTISVTSPQSPLRIATAPVTSSALTTVVPATSITASSETNNCSHCGEVLESAVLLQKHIAAYHQQDPQTKEKSPTPLIVTKEETPPNVTLVCIYCSEDFQTMDELKLHVDVKHYTMLNGLTSSASRVQTPVPISAPLSSSSSNIQHNSPPLLNYHLHSPVIDSPKLVCHICTIQFSNPQMFQHHLLTVHRNMYQNICPYCAQQFETRDQMTEHFFQVHQSEQIKPTDLSKKTSLNESAHDTYGAKRFKKNMESTNIYANNIDTISTPLSRTSSSSTPNPLDMPNTLLCSQCDAALPDFESFRIHLKIHLEHGGDGIRSMFEHTKQFPPNNLLNDILKTSYMLSCPHCTQIFKDHHTLEKHICSHFLAAVTEYNCKTCAKSFTNADDLQKHLLDSHAQHVFRCSLCKELFESRVAIQVHFAVKHSGESQLFRCVMCPNDVRSVFRTEKSGKIHIRSNHSANLLPTIVSPSVANTTKQYRCHFCLNKYDSEIEFQLHLTMHFQPYKCPICQKIFQVEYLLERHMQDYHQSTNQVSSNGGSTQIDETYDQKSSTSSHFNTKIKNLSHETAQKETLNCIKLETPDYKVNICDLCDRNDFANETELVAHRKLVHHMKSTSKNGVVSLHCAYCNENCKSRTELESHMKNHSQSSGVSGKHKCNICDELCPSAALLAEHKLTHCKVVSGNCCTQCKATLSTDDQYYTHLIQHSTAAGNSNNNNNSGQIALPYPCVICRQTLISNIEVRMHAQFHIRNILSTSSTNEFQCILCLKSLDKSKLISGGGAICKDCFIQHSYNLEKTLHQQSTIDEKQQKFACIRCQLNFDTELEIQNHITTHLNESTNSQFQHECHLCRSKFSNSYKLQIHLIEHTFAGFGSFTCYLCSAVFTGAQGLHSHMLEHGLTNRPYDCQKCSSRFFFRAELDNHSYTLHQSSAESNNSAPNVTDSYRQHYQCTDCHLDFHQLEHFMNHTKSVHGNDLTEKSLKNAPCSVSSDNEYIEVGGSPHSSNRVLVESTTVANS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00333219;
90% Identity: -
80% Identity: -