Basic Information

Insect: Chrysoperla carnea
Gene Symbol: L_1
Assembly: GCA_905475395.1
Location: FR997759.1:33168118-33180871[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.4e-05 0.0012 19.6 1.4 1 23 85 107 85 107 0.98

2 20 0.49 11 7.1 4.2 1 23 113 135 113 135 0.98

3 20 6.9e-06 0.00015 22.4 4.0 1 23 141 163 141 163 0.99

4 20 0.0005 0.011 16.6 0.2 1 23 169 191 169 191 0.98

5 20 0.01 0.22 12.4 2.7 3 23 276 297 275 297 0.95

6 20 4.3 94 4.2 0.1 3 23 326 347 324 347 0.89

7 20 0.0035 0.076 13.9 2.2 2 23 399 421 398 421 0.96

8 20 0.075 1.6 9.7 0.5 2 22 428 448 428 450 0.88

9 20 0.9 19 6.3 0.1 3 23 520 540 519 540 0.98

10 20 0.0078 0.17 12.8 8.3 2 23 577 598 576 598 0.97

11 20 7.3e-05 0.0016 19.2 0.8 1 23 606 629 606 629 0.93

12 20 2.1 45 5.2 0.2 1 23 634 657 634 657 0.91

13 20 6.9 1.5e+02 3.5 2.7 1 23 716 738 716 738 0.98

14 20 0.00014 0.003 18.3 0.4 1 23 742 765 742 765 0.96

15 20 0.03 0.64 11.0 4.4 2 23 866 887 865 887 0.96

16 20 0.037 0.8 10.7 0.6 1 23 897 919 897 919 0.98

17 20 8.3 1.8e+02 3.3 0.1 1 23 968 990 968 990 0.94

18 20 0.042 0.91 10.5 4.1 1 23 1086 1108 1086 1108 0.96

19 20 0.052 1.1 10.2 0.4 1 23 1116 1138 1116 1138 0.97

20 20 0.096 2.1 9.4 6.7 1 23 1191 1214 1191 1214 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.4e-05	0.0012	19.6	1.4	1	23	85	107	85	107	0.98
2	20	0.49	11	7.1	4.2	1	23	113	135	113	135	0.98
3	20	6.9e-06	0.00015	22.4	4.0	1	23	141	163	141	163	0.99
4	20	0.0005	0.011	16.6	0.2	1	23	169	191	169	191	0.98
5	20	0.01	0.22	12.4	2.7	3	23	276	297	275	297	0.95
6	20	4.3	94	4.2	0.1	3	23	326	347	324	347	0.89
7	20	0.0035	0.076	13.9	2.2	2	23	399	421	398	421	0.96
8	20	0.075	1.6	9.7	0.5	2	22	428	448	428	450	0.88
9	20	0.9	19	6.3	0.1	3	23	520	540	519	540	0.98
10	20	0.0078	0.17	12.8	8.3	2	23	577	598	576	598	0.97
11	20	7.3e-05	0.0016	19.2	0.8	1	23	606	629	606	629	0.93
12	20	2.1	45	5.2	0.2	1	23	634	657	634	657	0.91
13	20	6.9	1.5e+02	3.5	2.7	1	23	716	738	716	738	0.98
14	20	0.00014	0.003	18.3	0.4	1	23	742	765	742	765	0.96
15	20	0.03	0.64	11.0	4.4	2	23	866	887	865	887	0.96
16	20	0.037	0.8	10.7	0.6	1	23	897	919	897	919	0.98
17	20	8.3	1.8e+02	3.3	0.1	1	23	968	990	968	990	0.94
18	20	0.042	0.91	10.5	4.1	1	23	1086	1108	1086	1108	0.96
19	20	0.052	1.1	10.2	0.4	1	23	1116	1138	1116	1138	0.97
20	20	0.096	2.1	9.4	6.7	1	23	1191	1214	1191	1214	0.98

Sequence Information

Coding Sequence: ATGTTATTTAAAGGTAACAGTAGTCGATTAGAGTTCTTAATTGGAAAAATTCAAAATCATCATTTTCCACCTACATTCATGAAAAAAGATACATTGGGAACAGAATCTGGTGGAGGTAGTTGGCAATCTGATAATGGTGAAGAGCCACGTACCCCACCCACACCAGCTTCATCATGTCCAACACCAAATTCAAGCAGTGATTTACCTGAATCTGAATTGGTGTTTACTGTGGGTGTCACGGAATCGACACCATATCCATGTCAATTTTGTACGAAAGCATTTCCACGTTTGAGCTACTTAAAAAAACATGAACAGACGCACAATGACAAGATGCCATTCAAATGTGAATTTTGTTCACGATTATTTAAATATAAACGGTCACGTGATCGGCATATCAAATTACATACCGGTGATAAAAAATATCGTTGTACACATTGTGAAGCTGCATTTTCCAGAAGTGACCACTTAAAAATTCATTTACGCACCCACGATAATGGTAAGCCATTTCAATGCGTTACATGTAATCGAGGGTACAATACTGCTGCAGCTCTGACGTCACACATGCAAAATCATAAAAAACAACAACGTCAGCAGCAACAACAGGTGGGAATGGGAATGGTAGTCACAACGACCCCAACCCTTACATCGACAACTTCTTCGTGTATAGATTTGACACGACAATCGGAAATATCGACCACAATCACGGTGACGTCACCGCAATCACCTTTACGAATTTCTACAGCACCAATTAGAACTTCATCTCTGTCGATGGCAACACCTACACCTGAAGCGTCCAGTCCATCAAAGTTATCGGAGAATAATTGTTGCTCACATTGTGGGGAGCTTTTTGAATCGACGTCACTCTTACAAAAACATATTGCATCATACCATCAACAAGATTTACAAGCAAAAGAAAAATCACCAACCCCCTTAATAATAACGAAACAAGAAACACCTCCGAGTGTTACCTTAGTTTGTATTTATTGCTCAGAAGATTTTCAAACGATGGACGAATTAAAAGTTCACGTTGATGTGAAACATTACATCAATGGGATAACTTCTTCATCCTCCCGAGTTCAAACACCTGTTCCAATTCCCGCCCCGCTATCCTCATCCTCATCGAATATCCAACATAATTCACCACCACTATTAAACTATCATTTACATTCCCCAATTATCGATAGTCCAAAATTGGTATGTCACATTTGTACCCTCCAATTCTCAAATCCACAAATGTTCCAACATCATTTATTGACAGTGCATCGTAACATGTATCAGAATGTTTGCCCATATTGTACTCAACAATTTGAGACACGTGATCAAATGACGGAACATTTTTTCCAAGTCCATCAATCGGAACAAATTAAACCAACGGATTTGAGTAAGAAGACATCGCTGAATGAACCGCATGACACGTATGGAGCGAAACGGTTTAAGAAAGCACAATTAGAATCCACGAATATTTATACAAATAATATCGATACAATATCCACGCCATTATCGCGGACATCCAGCTCATCTACCCCGAATCCATTAGACATGCCAAACACTTTACTGTGCAGTCAATGTGATGCAGCTTTACCAGACTTCGAATCATTTCGTATTCACTTAAAAATCCATTTAGAACATAGCGGTAGTGGAGATGGAATTCGTTCGATGTTCGAGCATTCACAAAAATTTCCACAAAATAATTTATTAAATGATATTCTAAAAACGTCTTACATGCTGTCGTGTCCACATTGTACGCAAATTTTTAAGGATCATCATACTTTGGAAAAACATATTTGTACACATTTTCTGGCATCCGTTACTGAGTACAATTGCAAAACATGTGCGAAAACTTTTACCAATGCAGATGATCTACAAAAGCATTTACTGGATACACATGCGCAGCATGTGTTTCGATGTTCGTTGTGTAAGGAATTATTCGAGTCACGAGTTGCGATTCAAGTACATTTTGCGGTTAAACATAGTGGTGAAAATCAATTATTTCGTTGTGTTATGTGTCCAAATGATGTACGATCTGTGTTTCGTACAGAAAAATCCGGTAAAATCCATATACGCACAAATCATAGCGCAAATTTACTACCATCAATTCATCAAGTGTCCCCATCTGTGCCAGCCAATACACCAAAACAGTATCAGTATCGTTGTCATTTCTGTTTGAACAAATACGAATCAGAAATTGAATTTCAATTACATTTAACGATGCATTTTCAACCATACAAGTGTCCAATTTGTTCCAAGATATTCCAAGTGGAATATTTGTTGGAACGACATATGCAAGACTATCATCAATCTACGAATCAAGTTTCTTCGAATGGTGGCTCAACACAAATTGAAGAAACATACGATCAAAAATCAAGCTCAACATCAACTCATTTCAATTCATCGAAATCGAAATCAACGTTATCACATGAAAACACAAAAGATCCACAATCACTGAATTGTATCAAACTAGAAACACCCGATTACAAAGTCAACATATGCGATTTATGTGATCGAAATGATTTTGCAAATGAAACGGAATTAATTGCACATCGTAAGTTAGTCCATCATATGAAATCCACTTCGAAAAATGGTGTGGTTAGCTTACATTGCGCATACTGTAACGAAAATTGTAAGTCACGGACTGAGTTAGAAAGTCACATGAAGAATCATTCGCAAAGTAGTGGCGTTTCTGGTAAACATAAGTGTAATATATGTGATGAACTTTGTCCATCCGCTGCTCTTTTAGCCGAGCACAAATTAACTCATTGCAAAGTGGTGTCCGGGAACTGTTGCACTCAATGTAAAGCGACATTATCGACCGATGATCAGTATTATACACATTTAATTCAACATTCAACCGCCGCGGGAAATTCAAATAACAATAATAATAGTGGACAAATAGCGTTACCGTATCCGTGTGTGATTTGTCGACAAACATTGATCTCAAATATTGAAGTCCGAATGCATGCGCAGTTTCACATACGCAATATTCTATCGACATCGTCCACAAACGAATTCCAATGCATTCTATGCTTAAAATCGTTAGATAAATCGAAGTTGATATCCGGTGGAGGGGCCATTTGTAAGGATTGTTTTATTCAACATAGTTACAACCTCGAAAAAACCTTACATCAACAATCGACCATGGAAGAAAAACAAAAATTCTCATGTATTCGATGCCAGTTAAATTTCGATACAGAACTAGAAATTCAAAATCATATAACAACACATCTAAATGAATCAACATCGAATTCACAATTCCAACACGAGTGCCATTTATGCCGGAGCAAGTTTTCGAACTCGTATAAGTTACAAATACATTTAATCGAACATACATTCGCCGGTTTTGGTAGTTTCACTTGCTATTTATGTTCAGCGGTGTTTACGGGCGCACAAGGATTACATTCGCACATGTTAGAACATGGTTTAACGAATCGTCCGTACGATTGTCAGAAATGTTCGTCTCGATTCTTTTTCCGTGCCGAATTGGATAATCATAGTTATTCGCTACATCAATCTTCGGCTGATAGCAGTAACAGTAACAGTGTGGCTACGAATGTTGATACTTATAGGCAACATTATCAGTGTACAGATTGTCATTTGGATTTTCATCAGTTGGAACATTTTATGAATCATACTAAATCGGTGCATGGTAACGATTTAACGGAGAAGAATAATAAGAATGCACCGTGTTCGGTATCTTCAGATAATGAATATATTGAAGTTGGAGGTTCACCAAATTCTACAAATCGTGCTTTAGTTGAATCGACAACTGTTGCTAATAGTTAA
Protein Sequence: MLFKGNSSRLEFLIGKIQNHHFPPTFMKKDTLGTESGGGSWQSDNGEEPRTPPTPASSCPTPNSSSDLPESELVFTVGVTESTPYPCQFCTKAFPRLSYLKKHEQTHNDKMPFKCEFCSRLFKYKRSRDRHIKLHTGDKKYRCTHCEAAFSRSDHLKIHLRTHDNGKPFQCVTCNRGYNTAAALTSHMQNHKKQQRQQQQQVGMGMVVTTTPTLTSTTSSCIDLTRQSEISTTITVTSPQSPLRISTAPIRTSSLSMATPTPEASSPSKLSENNCCSHCGELFESTSLLQKHIASYHQQDLQAKEKSPTPLIITKQETPPSVTLVCIYCSEDFQTMDELKVHVDVKHYINGITSSSSRVQTPVPIPAPLSSSSSNIQHNSPPLLNYHLHSPIIDSPKLVCHICTLQFSNPQMFQHHLLTVHRNMYQNVCPYCTQQFETRDQMTEHFFQVHQSEQIKPTDLSKKTSLNEPHDTYGAKRFKKAQLESTNIYTNNIDTISTPLSRTSSSSTPNPLDMPNTLLCSQCDAALPDFESFRIHLKIHLEHSGSGDGIRSMFEHSQKFPQNNLLNDILKTSYMLSCPHCTQIFKDHHTLEKHICTHFLASVTEYNCKTCAKTFTNADDLQKHLLDTHAQHVFRCSLCKELFESRVAIQVHFAVKHSGENQLFRCVMCPNDVRSVFRTEKSGKIHIRTNHSANLLPSIHQVSPSVPANTPKQYQYRCHFCLNKYESEIEFQLHLTMHFQPYKCPICSKIFQVEYLLERHMQDYHQSTNQVSSNGGSTQIEETYDQKSSSTSTHFNSSKSKSTLSHENTKDPQSLNCIKLETPDYKVNICDLCDRNDFANETELIAHRKLVHHMKSTSKNGVVSLHCAYCNENCKSRTELESHMKNHSQSSGVSGKHKCNICDELCPSAALLAEHKLTHCKVVSGNCCTQCKATLSTDDQYYTHLIQHSTAAGNSNNNNNSGQIALPYPCVICRQTLISNIEVRMHAQFHIRNILSTSSTNEFQCILCLKSLDKSKLISGGGAICKDCFIQHSYNLEKTLHQQSTMEEKQKFSCIRCQLNFDTELEIQNHITTHLNESTSNSQFQHECHLCRSKFSNSYKLQIHLIEHTFAGFGSFTCYLCSAVFTGAQGLHSHMLEHGLTNRPYDCQKCSSRFFFRAELDNHSYSLHQSSADSSNSNSVATNVDTYRQHYQCTDCHLDFHQLEHFMNHTKSVHGNDLTEKNNKNAPCSVSSDNEYIEVGGSPNSTNRALVESTTVANS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01061123;
90% Identity: -
80% Identity: -