Basic Information

Insect: Nineta flava
Gene Symbol: -
Assembly: GCA_963920215.1
Location: OY986044.1:68706678-68708345[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0018 2.9 8.5 0.9 12 29 90 107 72 119 0.75

2 15 0.026 43 4.8 0.2 6 28 113 135 108 144 0.80

3 15 0.00055 0.92 10.1 1.1 13 38 148 170 139 170 0.82

4 15 0.018 30 5.3 0.8 15 38 181 201 174 206 0.85

5 15 0.5 8.3e+02 0.7 0.2 18 29 212 223 204 233 0.80

6 15 0.0025 4.2 8.0 0.9 14 38 236 257 226 261 0.77

7 15 0.025 42 4.8 2.8 9 39 260 286 254 292 0.75

8 15 0.00042 0.69 10.5 1.3 12 38 294 317 281 326 0.70

9 15 0.1 1.7e+02 2.8 1.2 12 38 323 346 313 352 0.70

10 15 0.022 37 5.0 0.3 17 35 357 377 348 379 0.78

11 15 0.0035 5.9 7.5 1.9 13 33 409 429 398 430 0.79

12 15 0.028 46 4.7 1.7 3 28 428 453 426 464 0.87

13 15 0.0089 15 6.3 1.1 13 37 467 488 455 494 0.76

14 15 0.094 1.6e+02 3.0 1.1 17 29 499 511 489 521 0.78

15 15 0.014 23 5.7 0.3 14 30 524 540 512 545 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0018	2.9	8.5	0.9	12	29	90	107	72	119	0.75
2	15	0.026	43	4.8	0.2	6	28	113	135	108	144	0.80
3	15	0.00055	0.92	10.1	1.1	13	38	148	170	139	170	0.82
4	15	0.018	30	5.3	0.8	15	38	181	201	174	206	0.85
5	15	0.5	8.3e+02	0.7	0.2	18	29	212	223	204	233	0.80
6	15	0.0025	4.2	8.0	0.9	14	38	236	257	226	261	0.77
7	15	0.025	42	4.8	2.8	9	39	260	286	254	292	0.75
8	15	0.00042	0.69	10.5	1.3	12	38	294	317	281	326	0.70
9	15	0.1	1.7e+02	2.8	1.2	12	38	323	346	313	352	0.70
10	15	0.022	37	5.0	0.3	17	35	357	377	348	379	0.78
11	15	0.0035	5.9	7.5	1.9	13	33	409	429	398	430	0.79
12	15	0.028	46	4.7	1.7	3	28	428	453	426	464	0.87
13	15	0.0089	15	6.3	1.1	13	37	467	488	455	494	0.76
14	15	0.094	1.6e+02	3.0	1.1	17	29	499	511	489	521	0.78
15	15	0.014	23	5.7	0.3	14	30	524	540	512	545	0.83

Sequence Information

Coding Sequence: ATGGATACAATTGATGAATCCTTTCAAATCGAGTCAGGAGAATTATTACTCCTTGAATCAACATTCCACGCTGAAGATAAATTAGAGTCCAGCAGATATGATGAAACTGATTTCTTTGAGGAAAACTCTTGCAAAACAACAGTGACTAGTAGTACCTCCAGAAATCATGACCAGCCCCACGTTGGACCACAAATTTTTAAGTGCGATGTTTGTGATCAAACATTTCCGTACTATTATCGCTTGAAATGGCACTTAAATTCACATTTAGAAGATGAACATGAATTCACCTGCAACACATGTGGAAAAACATTTTCGCAGTCTGTAGCACTAAAAGTACATCAAAGGATACATACAACCGGCGAAAAACCGTTTAAATGTGATGTATGTGAAAAAACATTCACACAATTGGAAGGTTTACAACGACACTCAAAAATACATACCGgagaatttaattataaatgcgAAACGTGTGGAAAAACTTTTTCAGGAAGTAGAAATTTACGACAACATGAAGCGATACATAGTCGAATAAAACcagttaatatttataaatgtgatACTTGTGAAAAGACATTTACAAAATCGGAGCGGTTAAAACGACATCAACTTCTACATACGGGTGAACGACCATATAAGTGTGATACATGTGGAAAAGCCTTTACACAAATGGTCACAATGAAAACACATCAACTAGTTCATACAAATGAAAAACCACATGAATGTAATGTGTGCGGTAAGGCATTTTCACAATCGGGTACTTTAAAAAGACATAATAAAATTCATACTGgggaaaaaacaaataaatgtgaaTTGTGTAACAAATCGTTTTCAagtttagaaattttgaaacaacATATGGTTTTTCATACACGCAATGAAAATAAACCGAAGTCTTATGAGTGTGATATCTGTGGAAAAATTCTTTCACGATTCACTTATTTAAAACGACATCaaattttacaacatttacAAGAACGATTGTATAACTGTATTTTTTGTGGGGAAAAATTCCCTAATAAAAAGGTATTAATTGAGCATAAAAAATCGGAGCACACTGGAGATAAACCATATACGTGTATATATTGTAACGAAAGATTTTCACTGGATGAAGATTTAAAAACCCATCGAATTATTCATACgggaattgaaaaatttaattgtgaTTTTTGTGATCAATCATTTACTGACAAACCAACGTTTAAACAACATCGAAGAAGTCATAACGGGGAAAAACGGTATAAATGTACaatatgtgataaaaaatttacccgATCTAACGATGTAAAACGACATCAACGATTAGTACACACCGATGAAAAATATTACACATGTCATTTTTGTGATCAAAATTTTGTCGACAAAGCAATGTTAAAGGAGCATAAACGTACACATGCCGGAACTCATAAACCGTATGTCTGCACAATTTGCGATAAAACATTTTCACAatcggaaaatttaaaaatacataaacgtTTGCATAAAGGAGAAGAATGTTTTGAATGTAGTTATTGTGAGAAGTTGTTTACTGATGGAAGTCTTTTAAAAAATCATGAAATGATTCATGTTGgcgaaaattcatttaaatgtaATGTTTGTGAACAAACGTTTACACAATCGGGTAGTTTTAAATTTCATCAACGATTACATGAAATTCAGTTTTCGTTGTAA
Protein Sequence: MDTIDESFQIESGELLLLESTFHAEDKLESSRYDETDFFEENSCKTTVTSSTSRNHDQPHVGPQIFKCDVCDQTFPYYYRLKWHLNSHLEDEHEFTCNTCGKTFSQSVALKVHQRIHTTGEKPFKCDVCEKTFTQLEGLQRHSKIHTGEFNYKCETCGKTFSGSRNLRQHEAIHSRIKPVNIYKCDTCEKTFTKSERLKRHQLLHTGERPYKCDTCGKAFTQMVTMKTHQLVHTNEKPHECNVCGKAFSQSGTLKRHNKIHTGEKTNKCELCNKSFSSLEILKQHMVFHTRNENKPKSYECDICGKILSRFTYLKRHQILQHLQERLYNCIFCGEKFPNKKVLIEHKKSEHTGDKPYTCIYCNERFSLDEDLKTHRIIHTGIEKFNCDFCDQSFTDKPTFKQHRRSHNGEKRYKCTICDKKFTRSNDVKRHQRLVHTDEKYYTCHFCDQNFVDKAMLKEHKRTHAGTHKPYVCTICDKTFSQSENLKIHKRLHKGEECFECSYCEKLFTDGSLLKNHEMIHVGENSFKCNVCEQTFTQSGSFKFHQRLHEIQFSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01060904;
90% Identity: iTF_01060904;
80% Identity: iTF_01060904;