Nlug010597.1
Basic Information
- Insect
- Nilaparvata lugens
- Gene Symbol
- pnr
- Assembly
- GCA_014356525.1
- Location
- chr13:13729933-13737551[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1 5.5e+03 -2.5 0.0 8 14 126 132 124 138 0.71 2 3 2.6e-18 1.3e-14 53.9 3.2 1 34 155 187 155 189 0.97 3 3 4.6e-19 2.3e-15 56.3 6.0 1 35 216 249 216 250 0.97
Sequence Information
- Coding Sequence
- ATGTTTCATGGTTCCAACACACCCGGAGCAATGGCCATCTCATCCAACTACAACGAAAACTCAACTAACTGGGACACAACCCCTAGCTCAGCCATCAGTTCCCCCTCCTCCTCGTCCCACTGCCAACAACAGCAGCAACAACAACAACACCAGCAACAACAGAGCCAACAACAGCTGCTCTATGTGCCGGGCAGAAACAGCTGGGGCGGCGCGAATTCGGTTGGCGCCCAAGGCACAAGCTACCATGACGCCCATCTGCAGACGGCACAGTACAATGGGGCGTCAACCCATCATCAGGGGGTGGTGGCTCCCCCTCACCACCCTCCTCCTCACCACCCACCTCATCATCTGCCCAGCACTTTTTACGCCGCGCAGACGTCGATTATGTGGCGTGCGTATGACTACAATAACCCCGCGCATTATGATGGCAGCATGGAGTTCCAGATGGGCGAAGGCCGCGAGTGCGTGAACTGTGGTGCGATTTCGACACCACTGTGGCGTCGCGACGGAACCGGGCATTACCTGTGCAACGCATGTGGTCTGTACCACAAGATGAACGGCATGAATCGACCTCTGGTCAAACCTGCCAAGCGGCTAGTTAGTCCTGCATTGACTCAGACCGCAACCCGGCGCCTAGGCCTATCTTGCAGCAACTGTGGGACCCGCACTACGACGCTCTGGCGTCGTAACAACGAGGGAGAACCCGTCTGCAACGCTTGCGGTCTCTACTACAAACTGCACGCAGTCAACCGACCGCTAGCCATGCGCAAGGATGGCATACAGACACGTAAACGCAAGCCGAAAAAGGCCGCAAACGCAACCTCTGCCGCAACCGCAGGCGGAGCCGCAGGTGGTAGCGGGACGCACGAGACTGCGGCCAACAGTGGTTCAGACTCGAAACACGACCGTACGGATCGCCCCTACCTGGGCCATACCTCCCTGCTAGCGGGGCCCTCCGTTTCGGTGAAGTCCGAACCACCGTCAACCGCCTACACGGAGCATCACCATGTCACCCCGGGCCAACACACGGACCCCTACTACCACCACCACCATCACACGCATCAGTCGCTGACGTCAGCGGCTGCATCATCACCGTTCGGCGTGACGTCATCGCACCACCATCATCCCCATCATCAGTTGGGCTTCAACTTCCCACACGCGCACACACACGCAAGCGCCGCTCAGTCTACGAGCGGTTATCATCATCATCATCATCATTTGGGACCTAAAATTATGGCTACCACTTGA
- Protein Sequence
- MFHGSNTPGAMAISSNYNENSTNWDTTPSSAISSPSSSSHCQQQQQQQQHQQQQSQQQLLYVPGRNSWGGANSVGAQGTSYHDAHLQTAQYNGASTHHQGVVAPPHHPPPHHPPHHLPSTFYAAQTSIMWRAYDYNNPAHYDGSMEFQMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVSPALTQTATRRLGLSCSNCGTRTTTLWRRNNEGEPVCNACGLYYKLHAVNRPLAMRKDGIQTRKRKPKKAANATSAATAGGAAGGSGTHETAANSGSDSKHDRTDRPYLGHTSLLAGPSVSVKSEPPSTAYTEHHHVTPGQHTDPYYHHHHHTHQSLTSAAASSPFGVTSSHHHHPHHQLGFNFPHAHTHASAAQSTSGYHHHHHHLGPKIMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00858209;
- 90% Identity
- -
- 80% Identity
- -