Lstr017510.1
Basic Information
- Insect
- Laodelphax striatellus
- Gene Symbol
- pnr
- Assembly
- GCA_014465815.1
- Location
- CM025333.1:2607210-2657102[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 1e+04 -2.5 0.0 8 14 128 134 126 140 0.71 2 3 3.6e-18 2.4e-14 53.9 3.2 1 34 157 189 157 191 0.97 3 3 6.4e-19 4.2e-15 56.4 6.0 1 35 218 251 218 252 0.97
Sequence Information
- Coding Sequence
- ATGTTTCATGGTTCCAACACTCCGGGAGCAATGGCTATCTCATCCAACTACAACGAAAACTCAACTAACTGGGACACCACCCCTATCACAAGTACCAGCTCATCCACTCCCCCCTCTTCCTCATCACACTGTCAACAACAACAACACCATCATCAACAACAGCAGTCACAACAACAACTGTTATACGTGCCGGGCAGAAACTGGGGTGGCGGAGCCTCGTCTGTTGCCACCCAAGGCGCAAGCTCCCATTATGACGCCTCTCAAATGCAGGCGTCCGTGGCCCAGTACAATGGTGGCAATCAGGGGGTGCATCCCCCTCATCATCCCCCACATCCCCACCACCCGTCCCATCACCTGCCCAGCACTTTTTACGCCGCGCAAACTTCGATTATGTGGCGAGCCTACGATTACAATAATCCCGCGCATTATGACGGCAGCATGGAGTTCCAGATGGGCGAGGGCCGCGAGTGCGTGAACTGTGGCGCGATTTCGACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTCTGCAACGCCTGTGGTCTGTACCACAAGATGAATGGCATGAACCGACCTCTCGTTAAACCCGCCAAACGGCTGGTTAGTCCCTCCTTAACACAGACGGCCACCCGCCGCCTCGGTCTGTCCTGCAGCAACTGCGGCACGCGCACCACCACCCTCTGGCGGCGCAACAACGAGGGCGAGCCGGTGTGCAACGCTTGCGGCCTCTACTACAAGCTGCACGCCGTCAATCGACCGCTGGCCATGCGCAAGGACGGCATACAGACGAGGAAACGCAAGCCGAAGAAGTCGGCTGCGGCTAGCGCTGCGGCTGCGGCTGGAGGCGGCGGCACGCAGCAGGCTGGTGGGCAGGGCCAAGACGCCAAACCGGATCGCACCGACCGTCCCTACCTAGGACACACATCGCTGCTAGCAGCGCCCCCAGTTTCGGTGAAATCCGAACCACCGTCCTCAGCCTACCACGACCATCTCACCCCCACCCATCACGACCCCTACTACCCCCACCACCACCACCCGCCGCATCAGGCCGGCGTGACGTCACCCTCTGTAGTCACGTCGTCGCCTTTTGGCGTGACGTCATCACACCACCATCCACATCAGCTGGGCTTCAACTTTCCGCACGCGCACACACACGCCAGCTCCGCGCAACCGGCTGCTGGCTATCATCATCATCATCACCATCATCATTTGGGGCCCAAGATAATGGCTACCACTTGA
- Protein Sequence
- MFHGSNTPGAMAISSNYNENSTNWDTTPITSTSSSTPPSSSSHCQQQQHHHQQQQSQQQLLYVPGRNWGGGASSVATQGASSHYDASQMQASVAQYNGGNQGVHPPHHPPHPHHPSHHLPSTFYAAQTSIMWRAYDYNNPAHYDGSMEFQMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVSPSLTQTATRRLGLSCSNCGTRTTTLWRRNNEGEPVCNACGLYYKLHAVNRPLAMRKDGIQTRKRKPKKSAAASAAAAAGGGGTQQAGGQGQDAKPDRTDRPYLGHTSLLAAPPVSVKSEPPSSAYHDHLTPTHHDPYYPHHHHPPHQAGVTSPSVVTSSPFGVTSSHHHPHQLGFNFPHAHTHASSAQPAAGYHHHHHHHHLGPKIMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01060305;
- 90% Identity
- -
- 80% Identity
- -