Nlug017470.1
Basic Information
- Insect
- Nilaparvata lugens
- Gene Symbol
- SMARCC2
- Assembly
- GCA_014356525.1
- Location
- chr4:50627291-50673242[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-14 3.5e-11 43.5 0.2 3 44 619 660 617 662 0.95
Sequence Information
- Coding Sequence
- ATGTTGGCCTTAGAGCCAAAAAAGGATGGTGGACCAAACGTAAAATTCTTTGAAGCTCCTGATACAATATCACAATTTGATGGAATTAAAGCATGGATGCAAAAGAATTGCAAAAAGTACGTACAAACCGATCCACCAAACAGCAAGGGTCTGGCAACTCTTGTGATGCAGCTAATCCAATTCCAGGAGGATAATTTTGGTAAAAATGTTAATAAACCTCTGCTTACTAGGCTTCCGATGCGTTGCTTCCTGGATTTCAAGCCAGGGGGCGCACTGTGCCATATTCTGGCTGCTATGTACAAGTTCAAGATAGAACAGGGCTGGAGAAGATTCGATTTCCAGAGCCCTTCTAGAATGGATCGCAACGTTGAAATGCTGATGAGTGTGGAGAAGGCACTGGTGCAGAATAAGTGCCTGACAATGCCTTCTGTATTTATTCGGCCCGACGTCGACAAAGCCACAGCCACCAAAGTCAAGGATGTCATTAAAAGGCATCAGGGTACAGTAGCAGATACGGAGGAGGAGGCGACACACGTCATCTACCCGGCGTCAGACCCTCTGGACGAAGAGTACGCGCGACCCTCATTCAAGCGAGACCGCATGGTGATGATGCACTGGTACTACTTCCCCGACTCCTACGACTCCTGGGTCAGCGTCGACCTGCCTGTCGATCCGCCAGACTCGCCCGCCACGCACACCTCGCAGTGGAAGGTTTCCGCGTCTTGGGCTTTGGACCTGGATCAATACAATGAATGGATGAACGAAGAAGACTATGAAGTTGACGAAAATGGGAGGAAAAAAGTTCACAGGTTGAGATTGACAGTGGATGATCTGATGAGTACATCGGATCCAGAAAGAACAAAGAAAAAGCAAAAGAGAAAGAGATCACCATCTCCTCCCGTGAAAATGGGAAAGAGAAAGAGTGGTCGCAGTCCAGCCGTGGTGAACCCGAAGAAGGTGAAGAGTGAGGAGGAGGCCGACGACCTGACCAAGGACATGGATGAGCCCACTCCGGAGCCTAACGTGCAGGAGGTGACTGTGCCCAAGCCAGGTACGCATTACACCCATTCACATTCAAACAATACATCACATCCGTGTCCCGTTCCAGCTAGCTCTTCAACTTCGTCGAAAAAGGATAGCGAATCTCAGCCAATAAAGAGTGGCACAGTTGCTGATTTGGATGAAGAAATGGATAAGGGTGAAGACAGTCAAACCGGCAAGATGTCTGATACAAACACTCAGGACGTGACGATGAAGGAGGACCAGAGCCAGGAGGACAACGTGACTGAGCAGACCCATCACATCGTGATCCCCAGCTACTCGGCGTGGTTCGACTACAACTCGATTCACACGATCGAGAAGCGCGCGATGCCCGAGTTCTTCAACGGCAAGAACAAGTCGAAGACGCCCGAGATCTACCTGGCCTACCGCAACTTCATGATCGACACCTACCGCCTCAACCCGACCGAGTACATCACCAGCACGGCGGCCCGTCGCAACCTCGCTGGCGACGTGTGCGCCATCATGCGGGTGCACGCCTTCCTCGAGCAGTGGGGATTGATCAACTATCAGGTTGACGCCGACAGTCGTCCTACTCCGATGGGGCCGCCGCCGACGTCGCACTTCCACGTGCTCTCGGACACGCCCTCCGGCCTGCAGCCGGTCAACCCACCCAAGACGGCGCAGCCCTCCGCCGCTAAGACTCTCCTCGACATGGACAAGAAGGTCACCGCTCCCGACCACCTCGCCCCCAACTCAGACATCGAACCCGGCACCAATTTCGGCCTCAAACTCGATCAGTACAGCCGCAAGCCAGCCGCGCTGCGCAACAAGACAGCGGCCAGCTTGACGCGCGACTGGAGCGAGCAGGAGACGCTGCTGCTGCTGGAAGGCCTCGAACTGTACAAGGACGACTGGAACAAGGTGTGCGAGCATGTCGGCACCCGCACCCAGGACGAGTGCATCCTCCACTTCCTCCGGCTGCCCATCGAGGACCCCTATCTCGAGGACCATGAAGCTGGTGGTGGAGCACTGGGTCCGTTGGCCTACCAGCCGATTCCGTTCAGCAAGGCGGGCAACCCGATCATGTCGACTGTGGCCTTCCTGGCGTCGGTCGTCGACCCCCGCGTCGCCGCTTCGGCTGCCAAGGCCGCTATGGAGGAGTTCGCCAGCATCAAGGATGAAGTACCTGCTGCCTTGATGGATGCACATATTAAGAATGTTGAGGCTAACACTGCTGCTGATGGCAAATTCGATCCTGCAGCAGGACTGATACAGAGCGGTATCGCCGGTACAGTTCCCGAAAAGGAGGAAGAAAGTGAAAAAGCCGAGAAGAAAGACGCCGAAAGCGGTTCGAAAGAAGAAGCCAAAGAAGGTGGTGCAGCCACAAACAAAGAAGGAGGTGGAGCAGCAACGGCAGCAACCGGAGAGGCAGCAGCCGAAGTGGTGGTCAAGAAAGAAGTCACCGAAAAGGAATCTGGCGAAGGAGAAGCGATGGATGTGGATAAGAAGGAGGAGAGCAGCGAAGGAGAGGTGAAGGAGGAGACGGAGCGCGACAGAGTCGTCAAGGATGCTCAGTTGCAGTCGGCGGCAGCCGCAGCCCTGGCCGCAGCTGCGGTCAAGGCCAAGCATCTGGCCGCTGTCGAAGAAAGAAAAATAAAATCGTTGGTGGCGTTGCTGGTCGAAACCCAGATGAAGAAATTGGAGATCAAGTTGAGACACTTTGAAGAGCTGGAAACCACGATGGAGCGCGAGAGAGAGGGTTTGGAATACCAGAGACAGCAGTTGATACAGGAGAGACAACAGTTTCATTTGGAGCAACTGAAGGCGGCCGAGTTTAGAGCGAGACAACAGGCGCATCAGCGGCTGGCTGCAGAGCAACAAGGACAGCAAACCACTCCTTCCACCACACCCACCCCACCCTCGCCACAGGCTGTGCCAACACCTCAGCAAGCGGCTACTTCCCCTTCTCCCGCCTGA
- Protein Sequence
- MLALEPKKDGGPNVKFFEAPDTISQFDGIKAWMQKNCKKYVQTDPPNSKGLATLVMQLIQFQEDNFGKNVNKPLLTRLPMRCFLDFKPGGALCHILAAMYKFKIEQGWRRFDFQSPSRMDRNVEMLMSVEKALVQNKCLTMPSVFIRPDVDKATATKVKDVIKRHQGTVADTEEEATHVIYPASDPLDEEYARPSFKRDRMVMMHWYYFPDSYDSWVSVDLPVDPPDSPATHTSQWKVSASWALDLDQYNEWMNEEDYEVDENGRKKVHRLRLTVDDLMSTSDPERTKKKQKRKRSPSPPVKMGKRKSGRSPAVVNPKKVKSEEEADDLTKDMDEPTPEPNVQEVTVPKPGTHYTHSHSNNTSHPCPVPASSSTSSKKDSESQPIKSGTVADLDEEMDKGEDSQTGKMSDTNTQDVTMKEDQSQEDNVTEQTHHIVIPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTAARRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPSGLQPVNPPKTAQPSAAKTLLDMDKKVTAPDHLAPNSDIEPGTNFGLKLDQYSRKPAALRNKTAASLTRDWSEQETLLLLEGLELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFASIKDEVPAALMDAHIKNVEANTAADGKFDPAAGLIQSGIAGTVPEKEEESEKAEKKDAESGSKEEAKEGGAATNKEGGGAATAATGEAAAEVVVKKEVTEKESGEGEAMDVDKKEESSEGEVKEETERDRVVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRLAAEQQGQQTTPSTTPTPPSPQAVPTPQQAATSPSPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00283488;
- 90% Identity
- iTF_01353681;
- 80% Identity
- -