Nlug009534.1
Basic Information
- Insect
- Nilaparvata lugens
- Gene Symbol
- -
- Assembly
- GCA_014356525.1
- Location
- chr3:17797262-17813700[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-11 2.1e-07 31.5 0.0 1 87 82 173 82 183 0.74 2 2 1.4e-05 0.12 12.8 0.1 90 169 198 264 187 264 0.82
Sequence Information
- Coding Sequence
- ATGTCAGTTCAGGAAGTTCAAAGGATGTTCCAGCTGCCCATTGAAGCATCCGTAGGAAGAAACATAATCAAGCTGGCTTCAGATGAGGATATACGCTTCCCTCATCCCTATGGAGGAGGGCAAATGGGCACGGAGGCGCAGGCTTACGTACCACAGCAGGATATGCTGGGAACTCATAGTGAACGAGATGTGATTCCTCTCAGAAGTCAACTGCAATCGTATACCAGGAATGGCCAGATATTCCTTGATATTGCCGTGAAGCCTGAAAGGACACACAGAGCTCGTTACAACATAGAGGGCAGCAGGGGAGTTATCAGAGATGAAACTGGAATTTCACATCCTGTTATCAGATTGAATGGTTACAATAGACCAGCGAAGCTTCTTGCGTTTATTGGAACAGGGAGTGGGGATGTGGCTCCCCACCCGTACTACCAGGCCTGTTATACGAGGAACTACACTGTCTGCGCAGTGAGAGAGATCGAAAACACTGTAGTGTTGGAGATGAATTTTCATCCAGATGATCAGATGACTGTGAGACATGCTATAGAACCAGGTGACAAGTGGAATGCGATTTCCAGGAATGTACTTTTCTGTTCCAGTGTCGATTGCATGGGGATAATCAAGCTAAGGAAATACGATGTGGAACAAAGAATGCATGCTAGCGGTGTGCCTGTAGGCATCAGAGCCCCCCGAAAATCGTCAAAAGCTCGTTTGGTTTTTAGAACTACAATCATGCATCCAGACGGCTCTTGCGAAACCATACAGATTGCTTCTGACTCTATTGAATGCAGTGAGTAA
- Protein Sequence
- MSVQEVQRMFQLPIEASVGRNIIKLASDEDIRFPHPYGGGQMGTEAQAYVPQQDMLGTHSERDVIPLRSQLQSYTRNGQIFLDIAVKPERTHRARYNIEGSRGVIRDETGISHPVIRLNGYNRPAKLLAFIGTGSGDVAPHPYYQACYTRNYTVCAVREIENTVVLEMNFHPDDQMTVRHAIEPGDKWNAISRNVLFCSSVDCMGIIKLRKYDVEQRMHASGVPVGIRAPRKSSKARLVFRTTIMHPDGSCETIQIASDSIECSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -