Nves004450.1
Basic Information
- Insect
- Nicrophorus vespilloides
- Gene Symbol
- GATA6
- Assembly
- GCA_001412225.1
- Location
- NW:246910-264336[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0012 2.2 7.3 6.5 1 28 292 318 292 320 0.92 2 2 1.2e-18 2.3e-15 55.3 4.8 1 35 347 380 347 381 0.98
Sequence Information
- Coding Sequence
- ATGTGTAAAATGGATGAGCAGGAGACTTTACCTCAGGAagaacagcagcagcagacgGCAGCTACCATCTCGCCTTTGGAAGGAGGAGAGGTCGAGGCGGAGGCGAAGGTTGAGGAGCAGCCGACGGTACCTGAAGAGATTAAGCAGGAGGAGGCAACGCCCAAGCAGCAGTCGACGGTCATCATGAGGCCGCAGGTGATTACCACTGCTGGGACACTGATCGGAAGAAACGAGGAGCCGAGGGTATCGCAGGAGGATGCGGTTGAAACCTCTTCGCCCAACAACAACATCGAACAGGTCGAGTACGAAGAACAAcctcagcaacaacaacagcagcagcagttcGTCGAAGGCGCCATCCTCGCCGCGGATGCTACCTACACCCAGGTGAACGGCGCCGAATACCCAGAGCAGCAGTACACAGTGGAGATCACAAGTGGACAGATGCAGCATTCTTTACACATCGAAGCACCTCAGCAGTACGAGCAGGACGATATTAAGCAAGTGCAGTACACACAGTTGGAGAGCGTTGCCTCGAACAGTCAGTTCCAACCGCAGGAATACCAGGAACCCCAAGAGATTTACATGTACGACAACTTTACCGTCAAAGCAGCTAGACCCGATGACAACGTCCTCTACTCCGACAACAGATTCTTTGGGAATTGTGATATCCAGCAGAACAACACGATGACCTTGATGGGCGAGAACGGAAGTAACAGCACGCTCCTGACTTTTCCCAACTACAGCCAACCTTCGACCTCCAATTTCAACCAATATCCATCGTCGAACACGATGGACTATTCCAGTTACGGATACGCGCAGATCATCAGTGAAAGCTACGACCCGAACATGATAAGGGAGGAAATGAAGCAGTGCGTGAATTGCGGCAAAGGGGTGACGACCAATTGCGTCAAGGACAACAATGGGAACATCCTGTGCACGTCCTGCATCACGATGCGTCCGAATCCGATGAGGGTGGCGCCGGTGCGGACGCAGAAGAAGCCAACGATGGTCAACACTCGAAGGAATAACGTGCAGTGCGCTAACTGCGACACCCATCAAACGACCCTATGGAGGAGGAACAACAATGGAGAACCAGTGTGCAATGCCTGCGGATTGTACTTCAAATTGCACGGTgTAAATCGTCCACCGACGATGAAGAAAGAGGGAATCCAGACGCGCAAGAGGAAGCCAAAGAACTCACAGCAGTCGCATCATATGGGCTCGATGAATGGGTCCATGGGTCACGGAAGAATGCTGATCCAGACGTATCAACCGCCGGAGATGTCAGGATCGATGGGTGATCATTATCAACCGCAGATCGTCCTCACCAACAACGTTCCAACGCATCAGAACGTCAGGCTGCCGGCCCTTATCAGAGGGATGCCGCAAATGGAAAATAACGTTCGGGTTAACAACGAAGAACAGGCAACGGTCATCACCTCAACGTCTTTAGCGAACAGACCGAACTTTGTCCATCATCAATCCGACCAGGAATCCAACGGACACGACTCCAATGCTTAA
- Protein Sequence
- MCKMDEQETLPQEEQQQQTAATISPLEGGEVEAEAKVEEQPTVPEEIKQEEATPKQQSTVIMRPQVITTAGTLIGRNEEPRVSQEDAVETSSPNNNIEQVEYEEQPQQQQQQQQFVEGAILAADATYTQVNGAEYPEQQYTVEITSGQMQHSLHIEAPQQYEQDDIKQVQYTQLESVASNSQFQPQEYQEPQEIYMYDNFTVKAARPDDNVLYSDNRFFGNCDIQQNNTMTLMGENGSNSTLLTFPNYSQPSTSNFNQYPSSNTMDYSSYGYAQIISESYDPNMIREEMKQCVNCGKGVTTNCVKDNNGNILCTSCITMRPNPMRVAPVRTQKKPTMVNTRRNNVQCANCDTHQTTLWRRNNNGEPVCNACGLYFKLHGVNRPPTMKKEGIQTRKRKPKNSQQSHHMGSMNGSMGHGRMLIQTYQPPEMSGSMGDHYQPQIVLTNNVPTHQNVRLPALIRGMPQMENNVRVNNEEQATVITSTSLANRPNFVHHQSDQESNGHDSNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01058787;
- 90% Identity
- iTF_01058787;
- 80% Identity
- -