Ninv003837.1
Basic Information
- Insect
- Nicrophorus investigator
- Gene Symbol
- gata4
- Assembly
- GCA_963457615.1
- Location
- OY735140.1:32688599-32694587[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00058 1.6 8.7 3.5 1 28 297 323 297 325 0.96 2 2 1.6e-18 4.2e-15 55.3 4.8 1 35 352 385 352 386 0.98
Sequence Information
- Coding Sequence
- ATGGATGAGCAGGAAACTTTACCTCAGGAAGATCAGCAGACGGCAGCTACCATCTCACCTTTGGAAGCAGGAGAAGTCGAGACGGAGGTGAAGGCGGACGAGCAGCCGACGGCGTCCGTACCGGAAGAGATTAAGCAGGAGGAGGCAGCGCCCAAGCAGCAGTCGACGGTTATCATGAGGCCGCAGGTGATCACCACTGCTGGGACACTGATCGGAAGGAACGAAGAACCGAGGGTGTCGCAGGATGATGCGGTGGAAACATCTTCgcccaacaacaacaacaacatcgaaCAGGTGGAATACGAGGAGCAAccacagcagcagcagcaacagcagcagttCGTCGGAGGCGCCATCCTCGCCACAGATGCTACCTACACCCAGGTGAACGGCGCCGAATATCCAGAGCAGCAGTACACAGTGGAGATAACGAGTGGTGATCAGATGCAGCATTCCCTGCACATAGAAGCAGCTCAGCAGTACGAACAGGAAGATATTAAGCAAGTGCAGTACACGCAGTTGGAGAGCGTCGCATCAACCAGTCAGTTCCAACCGCAGGAATACCAGGAACCCCAAGAGATTTACATGTACGATAACTTTTCCGTCAAAGGAGCTAGACCCGATGAAAACGTCCTCTACTCCGACAACAGATTCTTTGGGCATTGTGATCTCCAGCAGAACAACACGATGACTTTGATGGGCGAGAACGGAAGCAACAGCACGCTCCTGGCATTCCCCAACTACAATCAACAACCTTCGACCTCCAATTTCAACCAATATCCATCGTCTAACACGATACCCCAGGTGGACTATTCAACGTACGGATACGCGCAGATCATCGCCGAAAGCTATGACCCAAACATGCAGATGAGGGAGGAAATGAAGCAGTGCGTGAATTGTGGTAAAGGGGTGACGACCAACTACGTGAAGGATAATAACGGGAACAACGTGTGCACGTCCTGCATCACCATGCGTCCGAATTCGATAAGGGTGGCGCCGGTGCGGACGCAGAAGAAGCCAACGATGGTCAACACTCGAAGGAATAACGTGCAGTGCGCTAACTGCGACACCCATCAAACGACTTTATGGAGAAGGAACAACAATGGAGAACCAGTGTGCAATGCTTGCGGATTGTACTTCAAATTGCACGGTgtAAATCGTCCACCGACGATGAAGAAAGAGGGAATCCAGACTCGCAAGAGAAAACCAAAGAATTCGCAGCAATCGCATCATATGGGCTCGATGAATGGGTCCATGGGTCACGGAAGAATGCTGATTCAGACGTATCAACCGACGGAGATGGCAGGATCGATGGGTGACCACTATCAACCGCAGATCGTCGTCACCAACAACGTTCCACCGCATCAGAACATCAGGCTACCGGCACTTATCAGAGGCATGCCTCAAATGGAAAATAACGTTCGGGTTAACAACGAAGAACAAGCAACCGTCATCACCTCAACTTCATTAGCGAACAGACCGAACTTCGTCCATCATCAATCCGATGCGGAATCCAACGGACACGACTCCAACGCCTAA
- Protein Sequence
- MDEQETLPQEDQQTAATISPLEAGEVETEVKADEQPTASVPEEIKQEEAAPKQQSTVIMRPQVITTAGTLIGRNEEPRVSQDDAVETSSPNNNNNIEQVEYEEQPQQQQQQQQFVGGAILATDATYTQVNGAEYPEQQYTVEITSGDQMQHSLHIEAAQQYEQEDIKQVQYTQLESVASTSQFQPQEYQEPQEIYMYDNFSVKGARPDENVLYSDNRFFGHCDLQQNNTMTLMGENGSNSTLLAFPNYNQQPSTSNFNQYPSSNTIPQVDYSTYGYAQIIAESYDPNMQMREEMKQCVNCGKGVTTNYVKDNNGNNVCTSCITMRPNSIRVAPVRTQKKPTMVNTRRNNVQCANCDTHQTTLWRRNNNGEPVCNACGLYFKLHGVNRPPTMKKEGIQTRKRKPKNSQQSHHMGSMNGSMGHGRMLIQTYQPTEMAGSMGDHYQPQIVVTNNVPPHQNIRLPALIRGMPQMENNVRVNNEEQATVITSTSLANRPNFVHHQSDAESNGHDSNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01059432;
- 90% Identity
- iTF_01059432;
- 80% Identity
- -