Nves003147.1
Basic Information
- Insect
- Nicrophorus vespilloides
- Gene Symbol
- Arid5b
- Assembly
- GCA_001412225.1
- Location
- NW:1786-8770[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-24 5.9e-21 74.0 0.0 2 89 179 264 178 264 0.94
Sequence Information
- Coding Sequence
- ATGTTTCGCACTCTGGAGTCGCCGTGGTCGTTGTTGGAGGATCTCTCAGCAAGGTCTGCGGTCCTCATCCAGTTCGGAAGAGCTTTTATAGATAATAAGGGGATCCGCAAAGGCACATCCGTTGTGATACTGAGCTATCCTCGGTACTGCCGGTATCGGGCGTTGATGAAACGGTTGGAGGGCATCGACAATGAGTTGGTACGGCACAAGATCATTCACGCTTGGGGCGGAATTCGCGTGCGATCGGACAACACTCGCGTCCTCTTCTGCAAGGACACCTTCGACTACCCCGAGCTGGAGGGACACGAGCTCCTCTGCAATCATCTAGCCCCGAAATTGAAAGGCCGTCCGCGTGGGAAGCGGAAAAAGCGCAGCATCTCCCCGGGCTCGGAGAGCAACGAATCGGAGTCCTCCGTCTCGGCCGCTTTCAATTCCGCAAAGAACAAAATTTCGACTGAAGTTACACGCAACGGTCTGCGATGCGAGCGGACATCGTCGCCGAGACGCAGCACCCGTTCCATGGAGAACACCGAGAACAAAGACTTTATTAGGAAACTATCGACCTTCTTGAAGAGTATCCGAACTCCCATGGGACGAATTCCATCTTTAGGCTACAAAGAACTGgacttacatttattttacaacaaagTGCAAAAACTGGGGGGCTACGATTCCGTGACGGCCAATCGGCTTTGGAAGTCGATATTCGATGACTTGAGCGGAAACCATTCGAGCACGAGCGCCGCGACGGTCATACGAAGACATTACGAAAGGTTTCTTCTGGCGTACGAGAGGCACTGCAAGGGTGAGGAATACAAACCAGTTACAGTTTCCGAGAGGAGGAAATTGAAGAATAAGACGGGTAATAATAGTGCCAGTGATGCGGAAACGAGCGAGGGCACATCGGGATGCGCGGCGCCTCACCCCGCAATCCCGAGCTGCTCCACCGCAATACCATCCACCTCAAGTGATAAGTTCAAATTTGATGCCATGAAACCGTCGTGTTCGTATTCATCTTCGCTGCGAAGTGTTCGCGTAAAGTCGGACAGGTCGCGTGAAATGAAGACAGACTTGGTGGATGGTGAGAAGAAGCATATGCCTGAGAAGAATCCGGAGCCGGTGACGGGGGCCGTGGCTCCGGTGCAGAAGATCACGCCGGAAAAGTCGACGTCCCCGGCTGAAGGAAAAGAGAACATACCTCTGTTCAATGCGAGGGATTCGCAGAGCGACGACGACGATCTCATCGAGGTGCCATACAGACCGAAGACGCCGGAAATCATTGATCTGGACGACGAAGTCTACAGCAGcaaaagcaacaacaataacaacatcaacagtaataataataacaataatagcaACAGCGCGAGTCAAACGGCGGTCGTGTTTGACGACAAGAAAGGTAAACTGGATATACTGAAGGAGGGTGGATTGGAAGTAACTCCGGTGCGGAGCTACTTGGCGCCGGCCGCCAAAGACACCGCGACGAGACCTTCCGTCATCCAAGACAACCATCTGCTGATGCCGCCGCCGCAGACGAGCCTCAGCAAAAAGCTGCCGCCCGCGCAGATCATCCCCAAACACGTGCAGTACCCGCAGATGTATCCATTCAACGGACCGACGCAACCGCCGCGCGTCGTCCAGTCCAAGTCGATTTACGCCCCGTCGCAGAGGACGGTGTACGGCGATCCCAAAGACCTCTTCGGCCATCAAGTGCAGACGCCCAAGTTTGCCAGTAAAACACCCGTCACCGATCTGCTCGATCTGACGGTGCGCAGTCCGCAGAAACCGGTCGTGGAAATAATGCGAGTGTCGCCGGTGCCGTCGCCGAAGCTGCCCACCAACACAAGCACTTcgagcagcagcagtagcagcagcgCCACCAgcaaaaacattttcaatacgCCCGCGCTGCCGCTGCTCGAAGGCCGCCGGATCAATTCCAATCTGGAGATCACCTTGGTGACAAAACCTCAGGTCAAGATGACGACCACCCCGCACCAACATgtccagcagcagcagcaacagcagcagcagcaacaaccaCAACTGATGTTCATGCACCCCAATTTCTATCCGCCTGCTCCGCTTTTACCGACGACCTCCAAGAGACGATCCGCCTCTACCGTAGACCACGGTATTCCACACAAGTACGGCCGCAGCGAGGAGAACGGTCGCAAGCAGCATTACGGCAAGAACAAGCAGATGACGTACATCAGAGCGCCGAAGGCGGCCGAGAAGACGACTGCAGCGGCGCAAAACGTCGTCCCCAAATTTATACCCAGCAACCAAGCACCGATCTTTTCGCACTACCCCAACCAGCAGCAGGCGAACAAGATCGGCCCGTACGCCATCAACCCCATGTACATGCAGGCCATCCAAAGTATGTACGGAAGTGGGACGCCCCCGAACCCCGGATCGGCTGCAGCggccgcagcagcagcagcatcagcCTCTTCGCCTCTCTTCCCCATGATTCCAAACGACAGGCTGATGATGCAGTACGCCCGTCTCCCCTTCAACTACGCCTTGGCCCAGAACGACGGTAGCAGCATTCCCTCCATCACCACCTCATCCGACAACAAAGGAAAGAAACAGTAA
- Protein Sequence
- MFRTLESPWSLLEDLSARSAVLIQFGRAFIDNKGIRKGTSVVILSYPRYCRYRALMKRLEGIDNELVRHKIIHAWGGIRVRSDNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSVSAAFNSAKNKISTEVTRNGLRCERTSSPRRSTRSMENTENKDFIRKLSTFLKSIRTPMGRIPSLGYKELDLHLFYNKVQKLGGYDSVTANRLWKSIFDDLSGNHSSTSAATVIRRHYERFLLAYERHCKGEEYKPVTVSERRKLKNKTGNNSASDAETSEGTSGCAAPHPAIPSCSTAIPSTSSDKFKFDAMKPSCSYSSSLRSVRVKSDRSREMKTDLVDGEKKHMPEKNPEPVTGAVAPVQKITPEKSTSPAEGKENIPLFNARDSQSDDDDLIEVPYRPKTPEIIDLDDEVYSSKSNNNNNINSNNNNNNSNSASQTAVVFDDKKGKLDILKEGGLEVTPVRSYLAPAAKDTATRPSVIQDNHLLMPPPQTSLSKKLPPAQIIPKHVQYPQMYPFNGPTQPPRVVQSKSIYAPSQRTVYGDPKDLFGHQVQTPKFASKTPVTDLLDLTVRSPQKPVVEIMRVSPVPSPKLPTNTSTSSSSSSSSATSKNIFNTPALPLLEGRRINSNLEITLVTKPQVKMTTTPHQHVQQQQQQQQQQQPQLMFMHPNFYPPAPLLPTTSKRRSASTVDHGIPHKYGRSEENGRKQHYGKNKQMTYIRAPKAAEKTTAAAQNVVPKFIPSNQAPIFSHYPNQQQANKIGPYAINPMYMQAIQSMYGSGTPPNPGSAAAAAAAAASASSPLFPMIPNDRLMMQYARLPFNYALAQNDGSSIPSITTSSDNKGKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01058155;
- 90% Identity
- iTF_01058155;
- 80% Identity
- -