Ninv013018.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nicrophorus investigator
Gene Symbol
Arid5b
Assembly
GCA_963457615.1
Location
OY735143.1:22648509-22651461[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-24 1e-20 74.1 0.0 2 89 155 240 154 240 0.94

Sequence Information

Coding Sequence
ATGTTTGTGTTTATTTCAGATAATAAGGGGATCCGCAAAGGCACATCCGTTGTGATACTGAGTTATCCCCGGTATTGCCGGTATCGGGCGGTGATGAAGCGTTTGGAGGGCATCGACAATGAGTTCGTGCGGCACAAGATCATTCACGCATGGGGCGGAATCCGCGTGCGATCGGATAACACTCGCGTCCTATTCTGCAAGGATACCTTCGACTACCCCGAGTTGGAGGGACACGAGCTCCTGTGCAATCATTTAGCCCCGAAATTGAAAGGCCGTCCGCGAGGGAAGCGGAAAAAGCGCAGCATCTCCCCGGGCTCGGAGAGCAACGAATCGGAGTCCTCCGTCTCGGCGGCCTTCAATTCCGCAAAGAACAAAATTTCGACTGAAGTTACACGCAACGGTCTACGATGCGAGCGGACGTCGTCGCCGAGGCGCAGCACCCGTTCCATGGAGAACACCGAGAACAAAGACTTTATTAGGAAATTATCGACCTTCTTGAAGAGTATCCGAACTCCCATGGGACGAATTCCATCTTTAGGCTACAAAGAACTGgacttacatttattttacaacaaaGTGCAAAAACTGGGGGGCTACGATTCCGTAACGGCCAATCGACTCTGGAAGTCGATATTTGATGACTTGAGCGGAAACCATTCAAGCACGAGCGCCGCAACGGTCATACGAAGACATTATGAAAgGTTTCTTCTTGCATACGAAAGGCACTGCAAGGGTGAGGAATACAAACCAGTTACAGTTTCCGAGAGGAGGAAATTGAAGAATAAGACGGGTAATAATAGTGCCAGTGATGCGGAAACGAGCGAGGGCACTTCGGGATGCGCGCCTCACCCTGCAATCCCGAGTTGCTCCACCGCAATACCATCCACCTCAAGTGATAAGCAGTTCAAATTTGATCCAATCAAACCTTCGTGTTCGTATTCGTCCTCGCTGCGAAGTGTTCGCGTAAAGTCGGATAGATCGCGGGAAATGAAGACGGAATTGGTGGATGCGGATAAGAAGCATATGCCTGAGAAGAATCCAGAGCCGGTGACGGGGGCCGTGGCTCCGGTGCAGAAGATTACGCCGGAAAAGTCGACGTCCCCGGCTgaaggaaaagaaaacatCCCTCTGTTCAATGCGAGGGATTCGCAGAGCGACGACGACGATCTCATCGAGGTGCCATACAGACCGAAAACGCCGGAAATCATCGATCTGGACGACGAAGTTTACAGCAGCaagagcaacaacaacaacaatattaacagtaacaataacaacaacagcgCGAGTCAAACGGCGGTGGTGTTTGATGACAAGAAGGGTAAACTGGATATATTGAAAGAGGGTGGTTTGGAAGTGACGCCGGTGCGGAGCTACCTGGCGCCAGCCGCCAAAGACACAGTGACCAGACCTTCTGTTATCCAAGACAACCATCTGCTGATGCCGCCTCCGCAGACCAGCCTCAGCAAAAAGTTGCCTCCCGCGCAGATCATCCCCAAGCACGTGCAGTACCCGCAGATGTACCCGTTCATTGGACCGACGCCACCGCGCGTTGTCCAGTCCAAATCCATCTACGCCCCATCCCAGAGGACCGTGTACGGCGATCCCAAAGACCTCTTCAGCCACCAGGTGCAGACGCCCAAGTTTGCCAGCAAAACGCCCGTCACCGATCTGCTGGATCTCACGGTGCGCAGCCCGCAGAAGCCGGTGGTGGAAATAATGCGGATGCCGCCGGTGCCTTCACCAAAGCTTCCCACCAATACAAGCACTTCGAGTAGCTCCACCAGCAAGAATATTTTCAACACGCCCGCGCTGCCGCTGCTCGAAGGCCGCCGAATCAATTCCAATCTGGAGATCACACTGGTGACAAAACCTCAGGTCAAAATGACGACCAACCCGTACCACCATgtccagcagcagcaacagcatcAGCAACTCTCGCATATGCAATCTCCGATCCCCACCTTCTACCCGCCCGCTCCGCCACTAACGACGAGCTCGAAGAGGCGATCCACGGCCACCGCGGAACACGGCGTTCCGCATAAGTACGGCCGCAGCGAGGAGAACGGTCGCAAGCAGCAATACGGCAAGAACAAGCAGATGACGTACATCAGATCGCCGAAGGCCGCCGAGAAGACGGCGACAGCGGCGCAGAACGCCGCTTCCAAATATCTGCCCAACAACCAAGTACCATTCTTTTCGCACTACCTCAACCAGCAGCAGGCGAGCAAGATCGGTCACTATACCATTGACCCCTTATACATGCAGACCTACCAAAGTATGTATGGAAGTGGCACAACCACGAACCCCGGAacagcggcagcagcagctgcAGCAGCCGCCGCCGCAGCATCGGCCGCCTCCTCGCCACTCTACCCCATGATTCCAAACGATAGGCTGATGCAGTACGCCCGTTTCCCCTTCCACTTCAACTACGCCCAGGCAGAAGGTAGCATTCCCTCCATCACCACCTCATCCGACAACAAAGGAAAGAAACAGTAA
Protein Sequence
MFVFISDNKGIRKGTSVVILSYPRYCRYRAVMKRLEGIDNEFVRHKIIHAWGGIRVRSDNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSVSAAFNSAKNKISTEVTRNGLRCERTSSPRRSTRSMENTENKDFIRKLSTFLKSIRTPMGRIPSLGYKELDLHLFYNKVQKLGGYDSVTANRLWKSIFDDLSGNHSSTSAATVIRRHYERFLLAYERHCKGEEYKPVTVSERRKLKNKTGNNSASDAETSEGTSGCAPHPAIPSCSTAIPSTSSDKQFKFDPIKPSCSYSSSLRSVRVKSDRSREMKTELVDADKKHMPEKNPEPVTGAVAPVQKITPEKSTSPAEGKENIPLFNARDSQSDDDDLIEVPYRPKTPEIIDLDDEVYSSKSNNNNNINSNNNNNSASQTAVVFDDKKGKLDILKEGGLEVTPVRSYLAPAAKDTVTRPSVIQDNHLLMPPPQTSLSKKLPPAQIIPKHVQYPQMYPFIGPTPPRVVQSKSIYAPSQRTVYGDPKDLFSHQVQTPKFASKTPVTDLLDLTVRSPQKPVVEIMRMPPVPSPKLPTNTSTSSSSTSKNIFNTPALPLLEGRRINSNLEITLVTKPQVKMTTNPYHHVQQQQQHQQLSHMQSPIPTFYPPAPPLTTSSKRRSTATAEHGVPHKYGRSEENGRKQQYGKNKQMTYIRSPKAAEKTATAAQNAASKYLPNNQVPFFSHYLNQQQASKIGHYTIDPLYMQTYQSMYGSGTTTNPGTAAAAAAAAAAAASAASSPLYPMIPNDRLMQYARFPFHFNYAQAEGSIPSITTSSDNKGKKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01058906;
90% Identity
iTF_01058906;
80% Identity
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