Nves003110.1
Basic Information
- Insect
- Nicrophorus vespilloides
- Gene Symbol
- -
- Assembly
- GCA_001412225.1
- Location
- NW:26288-30523[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00012 0.7 9.5 0.1 20 54 425 459 423 462 0.92 2 2 8.1e-05 0.47 10.0 0.0 16 54 809 847 802 850 0.87
Sequence Information
- Coding Sequence
- atgcGTTGTGCTGTGTTTGGTTGTAACAGTAACAATAACTCAAAGAAATATATCAACAAAACCATgaatttttttcgttttccaaAAGATCCAGATATTTGTGAAACGTGGATAAATGCTTGTTCACGAGCAGATAAGTTCAACGTAACTACTGCTAGAATCTGTCATCTCCATTTCAGCAAAGAAAAAGATTTTGTAAGATGCTTGAGAGAAGAATTACTAggggaaataaataaaagccgGAGGCAGTTGAAAGAAGGAGTAGTTCCAACATTAATGTTGAATAACTATGTTCATGGCCAAAAGGCAAAAACAATATATGCTTTAGTGAAATCCAATGATCATGTCTCTGGGCAAGGTGATATTAGGATTGAAGAAAGAATTCTCttggaaaatgaaaatgatttatcaCTTAGTACCAAGAAGACTcaaattaaaacaaagaaaccTGCAAAGAAGCCTGTAATcattagaaatttgaaaaatattactttattggGAAAGCAATTGAAAGTGCAAGGTGGCACTAGAAGttttggtaataataatagagaaaaaactattaatattcttcaaaaatcacaaattacCAATAGGAGTAGTggaATCAAGATAGAAAAGTCATCAAATAAacctgtaattattattaatagagaGAATACTGGTTCATTAGGAAATCCATTGCAAGTTGAAGGTGACAGATCTAGTGCTGgcaataatgataataatagtgAAAAAACAGTGGATGATGAAAGCACCAATAGGAATAGTggAGTAAAGATAGAAAAGTCGGAAAATAAacctgtaattattattaatatcaagaATACTGCTTTATTAGGAAATAACTTCAAAGTCAAAAGTGACAAATTTAGTGCTGGCAATATTAATAGTGGAAAAGCACTGGATGATGAAAGCATTCTTCAAAGATCACTTGCTACCAATACAAGTAATGgaATCAAGAGAGAAGATCCAAcaaataatactgaaattattacaaatttattaggAAACCACTTGAAAGTGGATTGTATCAGATCTTGTGCTAGCAGCAACATTACAACCAACAGCAGTGCTGAaatcaaCGCACAAGGTCCATCAAAGAACTATGTAATCGAAGGTTTGGTAGAGACACTctcaaatgcaacaaaaggTAGCTCCTGCAGTGGAAATATAAGTATTGAAAAAGCGGTGAATGTTGAAAACGTTTCACaaagattaataattactagtAGAAGTATTGGAACTAATACCGAAGGTTCTTCagatagtaaaaaaattattgcgGAATTGGAGCAGAAGATTGCTGTATTGGAATGGCAGTCGAAGGGTTTGAAAAATATCTTCTCGCCAGCGCAAATAAAGAGAATTAACGAACCACTCAAACGTCCTAGATGGTCGGAAGAAGATATTAGTGATTCCATTGTTCTTTTTGCAAATGGACCAAAAGTCTACAAATTGCTATTAGAAAAAGGATATCCCTTACCTGCGATCAATACTCTCCGATTATGGATGAAGAACGCTAACATTAAAAACCTGTATTTAAAAACGAAGATGCATAGTGGAACTAAGAGGGATAAAACAATAtccaacaaaataaagaaaactaaaaaTTTATTACCTAACATGCGTTGTGCTGTATTCGGATGCAACAGTGATAATCAGACAAAGAGGGAATTCGATAGAACAATAAAGTTTTTTCGATTTCCCGTTAAAGATCCAGTCGTTTGCGACAAATGGATTAATGCTTGTTCACGTGCGGACaagtttaatgtaaataatgccAGAATCTGTGAGCTGCATTTCAACAAAGAAACAGACTACGAACGTTGTTTGAAAGAAGAGTTGTTAggatatgtaaataaaaatcgtaGGCAATTGAAAAAAGGAGTAGTTCCATCATTAAAGAGATACAAGAATATGATGGATCAGAATGATAATGAGCAACCTGTTCCAAGAAAAAAGGGAAAcacagtatttattttagagaAATCAAAtatttgcaATGACTTCTCTGGTGTAGGCAATGTTAATGTTgaagaaacaattaatttagaaaatgtgcATCAATCTTCCATCAGATCCAACAAAACAGGAATCAATATACAAGATCCtgcaaaaaaacatttaattgtttcagaTTTAAAgagtattttcattgtaaaaagGCAGATGCAGGTAACAGGTGAAGGTTCTAGAGATGGAAATGATAAGAATGAAAGGACAAATAATACTGACAGTTTGAATCAAACATCACTTCTTGCCAACATGAGTAATGAtaaCAAATCTCCAGGTGCTTCAAACaatcatataaatttgaaatataatacagaATTGTTAGGAAAGCACTCTGAAACGATATGTAAAAGCTCTTCtcaaagattatttattaccaaaaGGAGTATTGcTACTAATACAGAAGGTGTTTCGGATAatcaaaaaacaatttcagATTTGAAGCAGAAGAATGCTATTTTGGAATGGCAAACGAAGGGCTTGAAGAGCATCTTTTCGCCAGcgcaaataaagaaaattaacgaGCCTCTCAAACGACCCAGATGGTCTGAAGAAGATATTAGCAATTCCGTTGTTCTTTATGCAACGGGGCCTAGACTCTATAAATTGCTAATAGGAAAGGGATACCCGTTACCTGCGATTGCTACTCTCCGATTTTGGATGAAGAACGCTGacattaaaaacttatatttaaaaacgaGGGTACGTACCGGAATACGCAAGACAGCTAAAATAAATTCCAACAAAAGAATAAAGATCGTTACAtaa
- Protein Sequence
- MRCAVFGCNSNNNSKKYINKTMNFFRFPKDPDICETWINACSRADKFNVTTARICHLHFSKEKDFVRCLREELLGEINKSRRQLKEGVVPTLMLNNYVHGQKAKTIYALVKSNDHVSGQGDIRIEERILLENENDLSLSTKKTQIKTKKPAKKPVIIRNLKNITLLGKQLKVQGGTRSFGNNNREKTINILQKSQITNRSSGIKIEKSSNKPVIIINRENTGSLGNPLQVEGDRSSAGNNDNNSEKTVDDESTNRNSGVKIEKSENKPVIIINIKNTALLGNNFKVKSDKFSAGNINSGKALDDESILQRSLATNTSNGIKREDPTNNTEIITNLLGNHLKVDCIRSCASSNITTNSSAEINAQGPSKNYVIEGLVETLSNATKGSSCSGNISIEKAVNVENVSQRLIITSRSIGTNTEGSSDSKKIIAELEQKIAVLEWQSKGLKNIFSPAQIKRINEPLKRPRWSEEDISDSIVLFANGPKVYKLLLEKGYPLPAINTLRLWMKNANIKNLYLKTKMHSGTKRDKTISNKIKKTKNLLPNMRCAVFGCNSDNQTKREFDRTIKFFRFPVKDPVVCDKWINACSRADKFNVNNARICELHFNKETDYERCLKEELLGYVNKNRRQLKKGVVPSLKRYKNMMDQNDNEQPVPRKKGNTVFILEKSNICNDFSGVGNVNVEETINLENVHQSSIRSNKTGINIQDPAKKHLIVSDLKSIFIVKRQMQVTGEGSRDGNDKNERTNNTDSLNQTSLLANMSNDNKSPGASNNHINLKYNTELLGKHSETICKSSSQRLFITKRSIATNTEGVSDNQKTISDLKQKNAILEWQTKGLKSIFSPAQIKKINEPLKRPRWSEEDISNSVVLYATGPRLYKLLIGKGYPLPAIATLRFWMKNADIKNLYLKTRVRTGIRKTAKINSNKRIKIVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01059148;
- 90% Identity
- iTF_01059148;
- 80% Identity
- iTF_01059148;