Basic Information

Insect: Nicrophorus investigator
Gene Symbol: stc
Assembly: GCA_963457615.1
Location: OY735140.1:7175669-7178752[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.8 2e+04 -4.0 3.0 6 10 277 281 273 281 0.61

2 13 0.072 7.7e+02 0.5 0.4 4 10 307 313 306 314 0.96

3 13 2.3e-06 0.025 14.9 13.6 3 19 321 337 320 337 0.93

4 13 6.4e-07 0.0068 16.7 12.0 1 19 373 391 373 391 0.91

5 13 1.7e-10 1.8e-06 28.1 10.9 1 18 431 448 431 449 0.98

6 13 1.9e-05 0.2 12.0 11.1 4 19 496 511 489 511 0.86

7 13 0.81 8.7e+03 -2.9 1.9 5 10 540 545 540 546 0.93

8 13 2 2.1e+04 -6.1 13.5 1 11 551 561 551 573 0.88

9 13 2.5e-10 2.6e-06 27.6 13.8 1 19 578 596 578 596 0.98

10 13 1.4 1.5e+04 -3.6 1.6 6 10 625 629 624 630 0.65

11 13 0.0051 55 4.2 13.3 1 19 635 652 635 652 0.80

12 13 0.00065 7 7.0 16.3 1 18 688 706 678 707 0.91

13 13 0.0031 33 4.9 15.4 3 19 718 736 717 736 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.8	2e+04	-4.0	3.0	6	10	277	281	273	281	0.61
2	13	0.072	7.7e+02	0.5	0.4	4	10	307	313	306	314	0.96
3	13	2.3e-06	0.025	14.9	13.6	3	19	321	337	320	337	0.93
4	13	6.4e-07	0.0068	16.7	12.0	1	19	373	391	373	391	0.91
5	13	1.7e-10	1.8e-06	28.1	10.9	1	18	431	448	431	449	0.98
6	13	1.9e-05	0.2	12.0	11.1	4	19	496	511	489	511	0.86
7	13	0.81	8.7e+03	-2.9	1.9	5	10	540	545	540	546	0.93
8	13	2	2.1e+04	-6.1	13.5	1	11	551	561	551	573	0.88
9	13	2.5e-10	2.6e-06	27.6	13.8	1	19	578	596	578	596	0.98
10	13	1.4	1.5e+04	-3.6	1.6	6	10	625	629	624	630	0.65
11	13	0.0051	55	4.2	13.3	1	19	635	652	635	652	0.80
12	13	0.00065	7	7.0	16.3	1	18	688	706	678	707	0.91
13	13	0.0031	33	4.9	15.4	3	19	718	736	717	736	0.92

Sequence Information

Coding Sequence: ATGTCCCATTGGGACCAGGACTGTGGTGGCCCCAGTCGGGGAGGAGGCGACAGTAGTAATGATGGTAGAAGCCAGCATCACGTTTATTTTGCCAACAATCGGGGTCACAGCAGCCGCAaccattataattatagtggTGGAGAAAGATCAGGAAATAGTAACTCTCAGGGAAATAATCATGATGAATCAAGCAATTCCAGACTGCCAATAGATATAAGTCAAACCAATTTACATGCAACAGCTGCAGAATTCAAGCCAGGAGCTTCCTATTATCCAAGGAACAATGGAGCCATCAAGAAAACATATAATGGGAAGGTTGAAAATGGTAAATTTAAAAGGTATTACAATAACAATTACGGCAAGAAGAAGCAACATAATGAACGTGTTGAAAATGATTCTGAGAGGGTGGAAGTAAATAGTGCTAAAGGAAATCATCAAAAGTTTAACAATGGAGAAAACAGATTTAATAACGGCGATAATAGAGGGTACAGAGGGAACGGATACAGGGGTAACAAGAATGGATATTATAAGGATGACTATAGTAAGAAGAGTGGCAATCCAAGGAATGATAACTGGAGGCAGAAGGAAAAGGATAGGGAGAGGAAACCACCTAAGCAAAACCAGAAAAAGGttgatGCTGGATCGCAGCGCGAAAGATTGGAGCACATGGTAACACATAGAACTTTGGAATGTTTGGTCTGCTGTGAGCGTCTAAGACACACCGACAAAATTTGGTCATGCAAACAGTGTTTCCACATCCTCCATCTGACCTGCGTCATCAAATGGGCAAAAGCATCCAGATTGGAAGAAGGTTGGAGATGTCCGGCCTGTCAAAATGTTTGCATAGAGGTGCCTCACGAATATAGGTGCTATTGTGGGAAATTTGTGGAACCCAAATTAGAGCCTGGTGGTCTTCCACATAGCTGCGGTGAGGTTTGCAGTCGCAAGGGGCGTGGGTGTGAACATCGATGCACTCTGCTGTGCCATCCTGGTCCATGTCCCGATTGCAGCATCATGGTTGGAAAATTATGCGGATGCGGCGCAACCAAACCCACTGTGAAATGCAGCTCTGACCTGGAGATCACCTGCCAAGGAATCTGCGACAAAACGCTGAATTGCAATGCGCACAAATGCACCAAGTCTTGTCACGTTGGCGATTGCGAGCCTTGCAAGGACTGGGTAAGACAGGAATGCTACTGCGGGAAGGTAGGAAGGAAAATCAAATGTACCGAAGAGGTTCAGGGTATTCACGTGTACGAGTGCGGAGAAGTTTGCGGTAAAAAATTGGGATGCGGAAACCACAGCTGTGAGAGATTGTGCCACGAGGGCGATTGCGAGTCGTGCGTATTGGATCCGAGGATCGTGAAGAGTTGTCCTTGCGGAGCGACGATGCTGAAGGAGGAACGAAAATCGTGCTTGGATCCCATCCCCTGTTGCGATAAGGTCTGCGGAAGGCCTAGAAAATGCGGACAACCTAGCCGTCCGCATGTGTGTCAAGACAAGTGCCATGTGGGTGACTGCGCCACTTGCACGTTGAGTACTTTGGTACGGTGTCGCTGCGGCCATATGGACAGAGAACTACCTTGCAAGGATTTAACCACTAAAGCGGACGACGCCAGGTGCCAGAAGAAGTGTACCAAACAAAGATTGTGCTGCAAGCACAAATGTAACCAGTTTTGTTGCATCGAAATCGAACATATCTGTCCTCTGCCATGCAACAGGATGCTTTCCTGCGGTCAACATAGATGCGAGGAAAGTTGTCATCGCGGTAGATGTCCTCCCTGCTGGAGAACAAGTTTCGAAGAGCATTACTGCGAGTGCGGATTTACCGTGCTTTATCCGCCTGTGGCTTGCGGAACTCGTCCTCCTCCATGCAGTCAACCCTGCTCCAGATCCAAGGATTGCGGGCACCCCGCCACGCATAATTGCCACACCGGTGCGTGTCCTCCATGCACCGTCTTCACATCCAAGTATTGTCACGGTAAGCACGAGATGCGACAGACCATTCCGTGCTACCAGAAGTATTTCAGTTGCGGCATGCCTTGCAACAAGGATTTACCTTGCCGTCGTCACAAGTGCATTCAGATATGCCATAGCAATCCGTGCCCGACGCCTTGTGGTCAAAAGTGTAAAAAATCGCGTCCCAATTGTGAGCATCCCTGCAATCAGCCTTGTCACGACTCACCGTGTCCGTCGGTTCCTTGCAAGCAGAACGTAACGGTGACGTGTCAATGTGGATTGCGTACGGCTACAAGAAGCTGCTTAGAAGTGGCAAGCGAGTACCAGAAAATAGCAACTTCACAGATGGCCTCGAAGATGGCGGAAATTCAGCGGGGACAATCGGTGGACATCTCTGATATTGTGAACAAGCAGAGAAAGGGTGCGCATAAGCTCTTGGACTGCAACGACGAATGCAGATTGGTCGAGCGGAATAGGCGCATGGCTATCGGCCTGCAGATACGTAATCCTGATCTGAGCTCGAAACTGACGCCGCGTTACACAGATTTTATGAAAGGTTGGGCGAAAAAGGATTCTCGATTTTGTCAACATATTCATGATAAGTTGACGGAACTAGTTCAACTGGCTAAGCAGAGCAAACAGAAGAATAGGTCGCATTCCTTCGAGTGCATGAATAGGGACAAGAGGCAGTTCGTGCACGAGTACTGCGAACACTTCGGCGTTGATAGTGCCGCGTACGATAAGGAACCTAACAGGAACGTCGTGGCTACTGCTTACAAAGAGAAATCTTGGTTGCCGAGTTGCAGTCTACTAGAGTTGCTGCAGAGGGAGAGCGGTCAGCGGAAGGTTCCTGGGCCGGTTTTGAACAAAGGCATCACCAACAACCCATCGGAGACTGTGTCGTTGAGATTGCAACTAGCCCGTCCTCCAGTCGCAAGCAGCAGCAACACGCCATCCTCGCCCGCCGGCGTCTTCGTAGACTACTTCGATAATCCCCCAGCGTAA
Protein Sequence: MSHWDQDCGGPSRGGGDSSNDGRSQHHVYFANNRGHSSRNHYNYSGGERSGNSNSQGNNHDESSNSRLPIDISQTNLHATAAEFKPGASYYPRNNGAIKKTYNGKVENGKFKRYYNNNYGKKKQHNERVENDSERVEVNSAKGNHQKFNNGENRFNNGDNRGYRGNGYRGNKNGYYKDDYSKKSGNPRNDNWRQKEKDRERKPPKQNQKKVDAGSQRERLEHMVTHRTLECLVCCERLRHTDKIWSCKQCFHILHLTCVIKWAKASRLEEGWRCPACQNVCIEVPHEYRCYCGKFVEPKLEPGGLPHSCGEVCSRKGRGCEHRCTLLCHPGPCPDCSIMVGKLCGCGATKPTVKCSSDLEITCQGICDKTLNCNAHKCTKSCHVGDCEPCKDWVRQECYCGKVGRKIKCTEEVQGIHVYECGEVCGKKLGCGNHSCERLCHEGDCESCVLDPRIVKSCPCGATMLKEERKSCLDPIPCCDKVCGRPRKCGQPSRPHVCQDKCHVGDCATCTLSTLVRCRCGHMDRELPCKDLTTKADDARCQKKCTKQRLCCKHKCNQFCCIEIEHICPLPCNRMLSCGQHRCEESCHRGRCPPCWRTSFEEHYCECGFTVLYPPVACGTRPPPCSQPCSRSKDCGHPATHNCHTGACPPCTVFTSKYCHGKHEMRQTIPCYQKYFSCGMPCNKDLPCRRHKCIQICHSNPCPTPCGQKCKKSRPNCEHPCNQPCHDSPCPSVPCKQNVTVTCQCGLRTATRSCLEVASEYQKIATSQMASKMAEIQRGQSVDISDIVNKQRKGAHKLLDCNDECRLVERNRRMAIGLQIRNPDLSSKLTPRYTDFMKGWAKKDSRFCQHIHDKLTELVQLAKQSKQKNRSHSFECMNRDKRQFVHEYCEHFGVDSAAYDKEPNRNVVATAYKEKSWLPSCSLLELLQRESGQRKVPGPVLNKGITNNPSETVSLRLQLARPPVASSSNTPSSPAGVFVDYFDNPPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01059441;
90% Identity: iTF_01059441;
80% Identity: -