Ninv010722.1
Basic Information
- Insect
- Nicrophorus investigator
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_963457615.1
- Location
- OY735143.1:529680-530103[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-26 9.5e-22 76.5 0.3 1 52 54 105 54 105 0.98
Sequence Information
- Coding Sequence
- atGCCCAAAGTGAAGTCGACGAAACGCAAGCAGTCCGAATCAGATTCAGATTCGGGCCCAGACGATAGGTATCCTTTGAAGAAATCGAAGGAGACTGATAAAAGTGGTGGTAGCAAACCATCCAgcggaggaggaggtggtggTGGCGATGATCTGAGCTGGGATCTGGGCAACAACCGTATGCTGAAGCTCACAGAATTCAAGGGTAAATGGTATGTGAACATCAGGGAATTCTATTTGGCTGATGGTGATCTGAAGCCAGGCAAAAAAGGAATCATGCTTTCGATGCCGCAGTGGCAAAAGTTCAAATCAGCACTGCCCGACCTAGAGGAAGCCATCAAGAAAAACGTTTAA
- Protein Sequence
- MPKVKSTKRKQSESDSDSGPDDRYPLKKSKETDKSGGSKPSSGGGGGGGDDLSWDLGNNRMLKLTEFKGKWYVNIREFYLADGDLKPGKKGIMLSMPQWQKFKSALPDLEEAIKKNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01059119;
- 90% Identity
- -
- 80% Identity
- -