Nvir000624.1
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_951802705.1
- Location
- OX637863.1:6825846-6828623[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.1 1.1e+04 -3.3 1.1 15 19 126 130 125 130 0.81 2 17 0.17 1.7e+03 -0.7 0.7 4 10 161 167 160 167 0.93 3 17 8e-08 0.00081 19.5 14.8 1 19 175 192 175 192 0.99 4 17 2e-06 0.02 15.1 12.9 1 19 229 246 229 246 0.94 5 17 2 2e+04 -6.0 14.9 1 19 281 300 271 300 0.90 6 17 3.5e-05 0.36 11.1 8.2 1 18 336 353 336 354 0.97 7 17 0.0047 48 4.3 6.4 1 12 388 399 388 399 0.94 8 17 1.9 1.9e+04 -4.0 1.3 6 10 409 413 409 413 0.96 9 17 1.2e-07 0.0012 18.9 15.3 1 19 419 437 419 437 0.94 10 17 0.8 8.1e+03 -2.8 0.6 5 10 465 470 465 470 0.90 11 17 0.00014 1.5 9.1 8.5 9 19 485 495 483 495 0.90 12 17 0.00016 1.6 9.0 6.6 1 12 505 515 505 515 0.95 13 17 0.87 8.9e+03 -3.0 5.8 14 18 554 558 554 559 0.89 14 17 0.00035 3.5 7.9 7.4 1 12 595 606 585 606 0.92 15 17 0.58 5.9e+03 -2.4 1.4 6 10 627 631 626 631 0.88 16 17 3.7e-05 0.38 11.0 12.2 2 19 640 656 639 656 0.91 17 17 8.2e-05 0.84 9.9 11.7 1 16 701 715 701 721 0.89
Sequence Information
- Coding Sequence
- ATGCGAAAATTCAAGCGGGCTCAGGCCCAGAATCAGGCGTCGATACAGAAGCATTTGGAGCAGGCCAATTCTTTGGATTCCTCTAGCGACGATGATAACGAAGACAACGGCGAAGCGTTGCAGCAGGCTGTAACCAAAGTTCTATCTTCTTATCAAGTCGAAGGCGGTGATACTGAAAAATCCATATCGTATCTAACGGATACGTTTCAATCAGGCGCGGCTACGTGTCTCATATGCATTTCATCCGTTAAGAAGACCGATCCGATATGGAGCTGCGCGACGTGTTTCTCGTTCATGCATCTCCCGTGTATACAACACTGGATAAGAGACAGCCTGAGCTACAAGCAAGAGAAAGGAATCACTCTTCTCTGGGCATGTCCAAAATGCCGCACGGAATATCCCGAAGATGAAGTACCGAAGAGGTATCTTTGTTTCTGTGGTCAAACAACGGATCCGCCGTATCAGCCATGGACGATAGCTCATTCCTGTGGAGAAAAGTGCGACAAGGAGCTTCGGCCATTGTGCGGTCATCGCTGCGTTCTGCTCTGTCATCCGGGCGCGTGTCCTCCCTGTCCGAAGATGATAACTGTAAAATGTTTCTGTGGCAAAGCATCGCCGCAAGCTCGTCGCTGCAACGCAAAGGATTGGAGCTGCGGAAAAATATGCTCGCGGAGTCTCCCGAATTGCTCGCATCGTTGCCGCGAAGAATGTCACACCGGAGCTTGTCCATCTTGCTCCGAGCGTCTTACGGTCGTCTGCAACTGTGGTGACCGAACGGAGGAGCGTCCCTGCAACGAGGCGAATTGGTATTGCGATAAAATCTGCGGCAAACGTTTATCCTGCAACGTTCACGTTTGCGAGGGTAATTGTCATCGTCCGACTGATTGCGGGGAGTGTCCAAGCGCGAAAAATCGCACCTGCCCTTGTGGCAAAAAGCGCTACAACGTTTCGTGCAAACAGGCGCAAGTTCCGACCTGTGGCGACACCTGTGGCAAACCGCTCAACTGTGGCTTGCACTATTGCAATATGAGATGCCACACGGACCGTTGCGGACAATGTCTCGAGGTCGTTACGAAAATGTGTCGTTGCCGATCGCACGAGAAAGAAATGGCATGCGCCAAGGAATTTCACTGTAATAAGAAATGTCCCCAAATGCGCTTATGCGGCATGCActtatgtaataaaaaatgctGCGATTGTCTGTTGCGCAATACTTTCAACGTTTGCGAGAAAATATGTGACAATACGCTCAATTGTCAGAAGCACAAATGTTCAGCGCCGTGTCACAGCGGACCTTGCTATCCTTGTCCGCGTACGAACGTTATACAATGCCGTTGCGGCAATTCTAAGATAACCGTACCATGTGGCCGTATAAAACGTCTAAAACCACCGAATTGTAACAAATTGTGCAAAATACCACCGGTTTGCCATCATCCGAAGCGCGAGTCGCACAAATGCCATTACGGACCTTGTCCGCCTTGTAAGAAGATATGTGCTTTGATACACAAGAAATGTGGTCATACTTGTCCGGCGCTTTGTCATACGAAAGTCTGGGTCAAGCGGACTGTAGCAAATGGCGCGAAAGGGACAGGACCGGAAGCGAACAGCGGGGCTTTCTTCGAACCACCGAAGGAGAATAGAATGCAACTCAAGACATTGCCGTGTCCACCTTGCGAGGTCTCGGTTATGATTACGTGCCTTGGCGGACATGAGACGTTACCATGGCCGTGTCACAGTGCTGTGGCCAAATCTTGCCTGAGACCCTGCGGTCAATTGCTCAGTTGCACCAATCATACGTGCGAGATGGTTTGTCACGATGTATTTAACGAAGCTGAAGAAAATGGCGAGCTAACCGGAAGTAATGCCAATTGTAACGAATGCGAGAGACCTTGCAAGCTTAAGAGACCACCCGGATGCGCTCATCAGTGTCCGAGACTGTGCCACGAGGCCCCTTGCTATCCTTGCAAACATCTGGTCAAAGTTTCATGCCACTGCGGCATTAATTCGTTGTACAAAAGATGCGCCCAGCTTACCTCGGCGACCGAGGAGTCGAGGACCGAATTGCTCAAGTGCGGCAATCAGTGTCCTAAGAACtACCCGTGCGGTCATCGCTGTGTCGAAAATTGTCATCCGGGTAAATGCTCGAATCCGGAAGCTTGCAGTAAGCGAGTCAAGGTGTGGTGCAAGTGCAAGAGGATcaagaaagatttttcgtgCACCAAAGTTCGCGAAGGCACGGTCAATTTCGATTGTGACGAAACTTGTAGAAAAATCCAGGAGGAACaggagagagcgcgcgagatGGAAGCTGCGAGAAAGCGACGGGAGGAAGAAGCGAAGAATCGTATGGAAATCGAGGAATTCGAGAGGAAATTTAAGCCGCGAAGGAAAGGACGAGGAAGAGCGCAATCGAACGACGATTACAATCGCGATGCATCGCCCGTCTGGAAGAAAGCTCTTATATTTGGAACGCTTTTCGTTGCGATAGTGTGTGCAATATTTTACACGAATCATGGAcagattaaattatttaattaa
- Protein Sequence
- MRKFKRAQAQNQASIQKHLEQANSLDSSSDDDNEDNGEALQQAVTKVLSSYQVEGGDTEKSISYLTDTFQSGAATCLICISSVKKTDPIWSCATCFSFMHLPCIQHWIRDSLSYKQEKGITLLWACPKCRTEYPEDEVPKRYLCFCGQTTDPPYQPWTIAHSCGEKCDKELRPLCGHRCVLLCHPGACPPCPKMITVKCFCGKASPQARRCNAKDWSCGKICSRSLPNCSHRCREECHTGACPSCSERLTVVCNCGDRTEERPCNEANWYCDKICGKRLSCNVHVCEGNCHRPTDCGECPSAKNRTCPCGKKRYNVSCKQAQVPTCGDTCGKPLNCGLHYCNMRCHTDRCGQCLEVVTKMCRCRSHEKEMACAKEFHCNKKCPQMRLCGMHLCNKKCCDCLLRNTFNVCEKICDNTLNCQKHKCSAPCHSGPCYPCPRTNVIQCRCGNSKITVPCGRIKRLKPPNCNKLCKIPPVCHHPKRESHKCHYGPCPPCKKICALIHKKCGHTCPALCHTKVWVKRTVANGAKGTGPEANSGAFFEPPKENRMQLKTLPCPPCEVSVMITCLGGHETLPWPCHSAVAKSCLRPCGQLLSCTNHTCEMVCHDVFNEAEENGELTGSNANCNECERPCKLKRPPGCAHQCPRLCHEAPCYPCKHLVKVSCHCGINSLYKRCAQLTSATEESRTELLKCGNQCPKNYPCGHRCVENCHPGKCSNPEACSKRVKVWCKCKRIKKDFSCTKVREGTVNFDCDETCRKIQEEQERAREMEAARKRREEEAKNRMEIEEFERKFKPRRKGRGRAQSNDDYNRDASPVWKKALIFGTLFVAIVCAIFYTNHGQIKLFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01056475;
- 90% Identity
- iTF_01056475;
- 80% Identity
- -