Basic Information

Insect: Netelia virgata
Gene Symbol: Hr39
Assembly: GCA_951802705.1
Location: OX637864.1:8311170-8317081[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.046 2.4e+02 1.1 5.5 44 166 198 317 188 358 0.73

2 4 4 2e+04 -7.5 14.3 58 128 374 442 361 477 0.47

3 4 7.6e-08 0.00039 20.1 0.0 1 21 537 557 537 561 0.92

4 4 2.6e-69 1.3e-65 222.6 7.9 165 408 686 938 661 938 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.046	2.4e+02	1.1	5.5	44	166	198	317	188	358	0.73
2	4	4	2e+04	-7.5	14.3	58	128	374	442	361	477	0.47
3	4	7.6e-08	0.00039	20.1	0.0	1	21	537	557	537	561	0.92
4	4	2.6e-69	1.3e-65	222.6	7.9	165	408	686	938	661	938	0.84

Sequence Information

Coding Sequence: ATGTCGGATCAAAACGGGCCCGCGGAGGGCCCGGGCTGGTGGCCTCCGGCACAATCGTGGAAGTCGAACGCGACCTCCGCGTCCTCGTCGTCCGCGGTACCAACCTCGCGCACCCTCGACGCCGGAAAAAACGTTTCGGTCACGACGATCAACGTACCACCGGCCCAGGAGATGCACGATGGTAAAAGCGTGTGCAAGTTCCTGGGAGGACAGAACGGCGTGACCGTGTCCGTGGTCTCGAGTTGCGGAAGTGGTCCAACGAGCGGTATGGGTGGCGTGAGTGCGTCATCCTCGTGTCCAGAGACGAGTTCCCTGGACGATCTCGAGGACAGCGACGGGGAAGTGAGCAAGATCGATTTTCGTGGTGTTAATCTACGCACGAAAAAGAAGCGCGACGGGACGATCGGTGGAACGGAGAACGAGTGCGGTGCCGTATGTGCGGACAATCTCGATCAACAGCAGCCGGAGAGACCGATGTCGTGGGAGGGCGAGTTGTCCGATCAAGAGATGTCTTCGAATACGATCACCAATCAGGACCACGAGGAGACATCGATGGAAGGTGTTCAGGTATGCGGGGCAAGTCCCGGGCCACAGGAACAAAAATTCCCGATAAAGCCCGAGCCGGATTTTCGCTCGAGTCCAAGTCTCGTTATTAATTCTCACAACGACGGAAGTTTGCCGCTCTCTCACGTTCAACAGTTGCAACAACAGCAGCGTGGTCTCGATTCCCTCGAGCAAACTCAACAGAGCGATTTGCCGTTGCTGGTTGGAAAGTTACTCGGTGGTTACAACAGTTCGACACCGAATCACAGTCCTATATTAAATCCTCGTCATCATTTGACGAAACACGGTCACACGAGGTCGCAGGTACCATCGCCGGATTCGGCGATACATTCGGCGTACAGCGTTTTCAGTTCACCGACGCAGAGCCCACACGCAGCTCGTCATTCCGCCCTTGGTCCTGGTAGTCCTGTACCATCGTCGTCCCTCTCGCTGTCACGTCACAGTTTCAACAATTCCACGTCGTCCCTGTCGCTCTCGTTGTCTCACTCGTTGTCTCGTAACAATTCGGACGCGTCGAGCAGTTGTTACAGTTACGGTTCACTCAGCCCACCGACTCACTcgcccgttcaacagccgcgACATTCTCACGCCCAGCATCAtcagcatcatcatcatcaacagcagcaacaacagcaacagcaacagcagcaacaacaacaaattccaCAAGCGGGAAGTCCATTGCATCTTCCATCGTCGACGGGACCAAATTCTCATCATTATTCGACGCAAGGCTCGGAAATATCGTCCGAGGGTCATCCCGAGGATCAGGAGGATTGCAAGATACCGACTGCTACCTCGGGAATATCTACGAGACAACAATTAATCAATAGTCCTTGTCCTATATGCGGCGACAAGATAAGCGGTTTTCATTATGGCATATTCTCGTGCGAATCCTGCAAGGGTTTCTTCAAACGTACCGTCCAAAATCGTAAGAATTACGTTTGCCTTCGTGGCGCCGGATGTCCCGTGACCGTTGCAACGCGAAAGAAATGTCCGGCCTGTCGTTTCGACAAGTGTCTCAATATGGGAATGAAACTCGAGGCTATCAGGGAAGATAGAACGCGAGGGGGTAGGAGCACGTATCAGTGCACTTATACCCTACCGGCGAATTTAATCGGTGGCTCGGGTGGTGGTATGTCCGGTGATAAAATGTCCGGGGGTAATTGCAGTCCCGCGCCACCTGGCTCGGAGCATCATCATTCCGTCAGACATCATTGGAATCATTCGCACAAGATGCAAGTTGTCCCACAATTGTTGCAGGATATAATGGACGTCGAGCATCTTTGGCATTACAACGACAACGATCGAGTCACGGGGGGAAGTCAGAGTGGAGGAGGTGGTCACGGTGGTAATGGTTTACCAATGACGAACGATATGCCCAGTGGTCTCGGGGGTGGTCTCGGGGGTAGTGGTCTCGGTTCCAGTGCTGGCAGTGGAAACGTAACGAGCACGAGCAACGGTAACGTCGACAATCGTTGCGAAACAACGAGATCGAGCAACGTATCGTCCGCTGGGAACAACGAACATCAGacacagcaacaacaacagcagcagcaacaacaacaacaacaacaacaacaacaacaacaaagttCACCGACGAACAATCCTACGAACGGTAGCACCACAAATCCCAATGGCAATGCAACGCAAAATCCTGACTTTCTCTCGAATCTTTGCAACATCGCGGATCATCGTTTGTACAAAATCGTCAAGTGGTGCAAGAGTTTGCCACTATTcaagaatatttcgatcgacgatcagATATGTTTGTTGATTAATTCATGGTGCGAATTGCTACTGTTCTCGTGCTGTTTTCGCAGTATGAGCACACCCGGGGAAATTCGCGTCTCGTTGGGAAAATCTATTACGTTGGAACAAGCCCGACAATTGGGCCTGGCAACTTGTATCGAGAGAATGCTCGCCTTTACGAATAATCTTAGACGACTGAGGGTCGATCAGTACGAGTACGTGGCGATGAAgGTCATAGTATTGCTGACGTCGGACACGAGCGAACTCAAGGAACCGGAGAAAGTTAGAGCGTCGCAGGAAAAAGCACTTCAGGCACTTCAGCAATACACGATCGCGAGGTATCCGGAAATGCCCGCGAAATTTGGCGAGCTACTTCTTCGAATACCGGATCTTCAGAGAACCTGCCAAGCTGGCAAAGAGTTGCTAAGTGCGAAACGCGCCGAGGGTGAGGGCAGTTCTTTCAATTTGTTGATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence: MSDQNGPAEGPGWWPPAQSWKSNATSASSSSAVPTSRTLDAGKNVSVTTINVPPAQEMHDGKSVCKFLGGQNGVTVSVVSSCGSGPTSGMGGVSASSSCPETSSLDDLEDSDGEVSKIDFRGVNLRTKKKRDGTIGGTENECGAVCADNLDQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPSLVINSHNDGSLPLSHVQQLQQQQRGLDSLEQTQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHGHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGPGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHAQHHQHHHHQQQQQQQQQQQQQQQIPQAGSPLHLPSSTGPNSHHYSTQGSEISSEGHPEDQEDCKIPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGSGGGMSGDKMSGGNCSPAPPGSEHHHSVRHHWNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRVTGGSQSGGGGHGGNGLPMTNDMPSGLGGGLGGSGLGSSAGSGNVTSTSNGNVDNRCETTRSSNVSSAGNNEHQTQQQQQQQQQQQQQQQQQQQSSPTNNPTNGSTTNPNGNATQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_01056843;
80% Identity: iTF_01057735;