Basic Information

Insect: Netelia thomsonii
Gene Symbol: -
Assembly: GCA_964017225.1
Location: OZ024921.1:7976145-7981079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.2 15 6.4 4.7 2 23 227 249 226 249 0.97

2 20 0.14 11 6.9 2.1 1 23 310 332 310 332 0.97

3 20 0.0022 0.17 12.5 1.4 1 23 381 403 381 403 0.98

4 20 0.041 3.1 8.6 5.6 1 20 470 489 470 494 0.91

5 20 0.71 54 4.7 1.4 1 23 503 526 503 526 0.89

6 20 0.0019 0.14 12.7 1.6 2 21 532 551 531 552 0.95

7 20 0.27 20 6.0 0.0 3 23 592 613 591 613 0.89

8 20 0.0065 0.49 11.1 0.3 1 23 619 641 619 641 0.96

9 20 1.7e-07 1.3e-05 25.5 0.2 2 23 685 707 684 707 0.96

10 20 0.19 14 6.5 0.2 1 23 713 736 713 736 0.94

11 20 0.009 0.68 10.6 0.1 1 23 743 766 743 766 0.94

12 20 0.0009 0.068 13.8 0.5 3 23 776 796 774 796 0.92

13 20 0.0031 0.24 12.1 0.1 2 20 852 870 851 870 0.95

14 20 0.028 2.1 9.1 0.0 1 23 889 911 889 911 0.98

15 20 0.00068 0.052 14.2 2.2 2 23 931 952 930 952 0.97

16 20 0.00042 0.032 14.8 0.5 1 23 971 994 971 994 0.94

17 20 0.11 8.3 7.2 0.3 3 23 1038 1059 1036 1059 0.96

18 20 0.00016 0.012 16.1 0.8 2 23 1084 1106 1083 1106 0.95

19 20 2.4 1.8e+02 3.0 0.9 1 23 1115 1139 1115 1139 0.95

20 20 0.0032 0.24 12.0 0.2 2 23 1197 1219 1197 1219 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.2	15	6.4	4.7	2	23	227	249	226	249	0.97
2	20	0.14	11	6.9	2.1	1	23	310	332	310	332	0.97
3	20	0.0022	0.17	12.5	1.4	1	23	381	403	381	403	0.98
4	20	0.041	3.1	8.6	5.6	1	20	470	489	470	494	0.91
5	20	0.71	54	4.7	1.4	1	23	503	526	503	526	0.89
6	20	0.0019	0.14	12.7	1.6	2	21	532	551	531	552	0.95
7	20	0.27	20	6.0	0.0	3	23	592	613	591	613	0.89
8	20	0.0065	0.49	11.1	0.3	1	23	619	641	619	641	0.96
9	20	1.7e-07	1.3e-05	25.5	0.2	2	23	685	707	684	707	0.96
10	20	0.19	14	6.5	0.2	1	23	713	736	713	736	0.94
11	20	0.009	0.68	10.6	0.1	1	23	743	766	743	766	0.94
12	20	0.0009	0.068	13.8	0.5	3	23	776	796	774	796	0.92
13	20	0.0031	0.24	12.1	0.1	2	20	852	870	851	870	0.95
14	20	0.028	2.1	9.1	0.0	1	23	889	911	889	911	0.98
15	20	0.00068	0.052	14.2	2.2	2	23	931	952	930	952	0.97
16	20	0.00042	0.032	14.8	0.5	1	23	971	994	971	994	0.94
17	20	0.11	8.3	7.2	0.3	3	23	1038	1059	1036	1059	0.96
18	20	0.00016	0.012	16.1	0.8	2	23	1084	1106	1083	1106	0.95
19	20	2.4	1.8e+02	3.0	0.9	1	23	1115	1139	1115	1139	0.95
20	20	0.0032	0.24	12.0	0.2	2	23	1197	1219	1197	1219	0.96

Sequence Information

Coding Sequence: ATGAATGTCGTGGACATACAAAATGTGCAAAACGTCTGTAGGTTGTGTCTCTCCATGGAGGAACCAAAAGCATCAATTTTCGCCGATCAAGCATCCTCAGTTTCGTTAGTCATGAAAATACAAAGTTGCCTGTCAATCGAGATTCTTGCAAGCGACAGAGTATCGACGATGATATGTGTCAACTGTATGCGGAGGGTGAATAAATGGTACGTTTACAAGGAGTATTGTCTACGTTCCCAACAAAAGCTGCAACACTGTCTTGGAGATCAATTAGAAAATCTAGGAAACATCAAGGTAGAACCCATGGATGTTTATGAGCCTCCGAGTCCACTGGAGACCGTACCGCTGACTACGGATGACGAGTTGGAAAGCTTGCCGGGCAGACGCGTCGAGGCAATTCCGATGATTTCCCCAGCCATGAACCATAATATGACGATGATCACTGCGATAAAGCGCGAAGCCATCGACGAAAGCAGCGCCCTTGATGAGACGAACCCTTTCGCGAGCCCCGAATTGTTGATAAATCCAATGGCCCTAACCGGGCACAAAGAGGACAGACTGATGGAAGCGGATTCGACGCAAAAGTTCATGAATGTCAAGAAAACCATTAAGAACAGTAAGAAGAAACTTCGTCGAGGGCCTCACACACATTTTCGAGGCATCCGACAATTTAAACAGCGCTGCCCACACTGTCAGATATATTTACACTCGAAGTATTCTTATGCGAATCATATGAAACGTTTTCATAGTAGCAAGATACATGAGAGAAAGAATAACCGTGCCACGAACATGGAGGAAGATATGGACAAAGGACACAGTGACGAGAATACCGAAGAGATCGAGGACGTCGAGGACGAACTTGCGAATCTAGAAAAGGATTCGCCTCTGACGCCTGTTCAGCAGAATATCATAAGTCAGCTTAAAACATTCTCCTGCTACTCCTGCCGACAATCGTTCGGCGATCGTCGAAGCACCCTCAATCACATAAGACAACACATGCCCGATCTACGTCCCTACACTTGCATCGCCTGTCTCACCGAATTCGCCGACCGTTCGATCTACAAACTTCACTGCGGCGCTTCGTTCCAGTGCGCTATGAAAATAGCCCTCGTGATTCCCGAACACGGAaccgaaaaatatttcacgtgtAACATGTGCCTCAGGTCACTTTCCAACAGGAAGGAACTCTTGAGCCACTTGTCGCGACACTCGGACAAACAGTACGAGCAGCTTCTAGCGCATCCCTTCAATACCCCACCAAAGCTCAAGCCAATGACCGCATTCACCTCGTCACCGAAGGAAAATTTTAAAACCAAGTCCAAAATGACTGAACATGCCAATCATGTTTCTGCCTATAACAAAAAGGTTATTCCATATCCTTATAAATCCGGAGATCCGGCGTACAATCATAAATGCACGTACTGTGGGATGATCTACAGATATAAGCAAAATATGTTTAAGCACGTCACCTTGTGCAAACATTTGCCACCCGAAGTTCGGATCTGTTATCAGTGCGTCGTCTGCGGACTAACTTTCCTCGCTTTCAGCAAATTTCACAATCATCTCAGTTCCGAGCACAAGAATCGTGACATCGAGTGTTCCCATTGCCGCATGAAATTCAAACAGTCGTCAGATTTTTTGCAACACTATCGAGACGAATGTACGATCAGGTTGACACGGGTGAATCAGAGTTCGCGGGTATGCGACGAGGAAGGTGGTTGGGAGATTGAGAATATGGATTCCAGCAGACCAATTGAGAGCGGAAAATTCGGCTGTGCCCTTTGTCCGGAGACCGTTTTCGATACAAGAGCCAAGCTGGTCGATCACATGAAGATTCATTCCAATCCAACGGTCTTTTCGTGCACTATATGCAGTTGCACTTTCGGCAATGCTTCGATTCTCGAGGCTCACATGGCCGATCACGAGGTTGGCATTCCTCCGCCGGCTCTTGACGACAATATGAGCAGCGTCCCTCTGCTGGAAGACGAGAGAAACTACGATATTAATGCAAGTCGTTTCTCTGTGCAATCTGATCTTGGCGCGAATAACACGGAATGCAACGAGTGCGGCAAAGTATTTGCAAATTATCCGAATCTTCGACGTCACATACGTAGCGTGCACGATGCTATTGGGCGGTTTAATTGTTTCACGTGTGCGTTGACTTTCGTTACGGAGGAACAGTGGCAGGATCACGTGGATAAAGAGCACGAAAGTACGAGTACGATGCACGCCTGTCCTTTATGTCCCGAGATATTCGAGAGCGAGCTCTCGCTCAACGATCATCGACGCGACGTTCACGGCTTGAACGGCGAGGCTCATTTGGCATGTTACATatgcggtaaaatatttatcaacGAAACTTCTCTTAAGATTCATCGAGGTCATCATTTCCGCGTTAATTCCCGGCTGAGCATCGGTAATCTGCAAAAACCATCGATGGAAACGGACGGCGCGAATGACGACGGTGAGATAATCATCGAGACGAGAAAATCACCCACGGCGAGAAAATCTTTTCCAAACGGAAGTCCTCATGCGAGATTGATGAATTTTCTGCAGTGTCAGGTATGCGATGAACGTTTTAATGACGTAGTAGATCTTCGCAAACATCTGTGGGACGTTCATTGCGCTCGCGCTAAGCCCGAACGAAATTATGCGTCGCAGAAATTTCAGTGCGAACTATGCACCAACGTGCTCCCCGACGAGGAAGGTCTCGCGAGTCACATGAAATGGCACGAGAGCAATCCGATATTGAGCCACGTGGAGAACACCGACAATGTCGAGGAGGAAACCCAGTGCGATCTTTGCGGCAAGTATTACAGTAGTTTCGCGAGTATGCGAAAACACAAGCGACGTCACAAGCTCGGCCTTCTCGGAAAGCATCACGgtcagacgaagaagaagaatgacGGACACGTGTGTACAATTTGTCGCAAGGTTTTCGCCGGAAAGACGACATTGGCGAAGCACAAAGAAGTCGCGCATCCGCCACGCACGTCCGCTTCGATCGAGGATCGAGAGATCATCAAACCGGTAAGACCAAGGCTCGATTTTGACGCCATTGTCAAGAATCACGGAGTTGTCCCGAAAAATGACGAGAAAAAATCAGTAAACTGCAATCTCTGTCGAAGAGTCGTGCCGAACATGAGGGCGCTTTACAAACATCGACAACGAGTACACAAAATTGTCATAGAGGACGACGCGACGGCTCTGAGAGACGATTATTACGATTCGGCTAATGGCGATCGCATAGTTTGCACGGTTTGCGACAAGAATTTCTCGAGCGTCGGAAATATGAGAAAACACTTTAAGAGACTTCACAGTACCACTCGTGTTTCGTCGCAGTTTAAGTGTTCGATCGAGGGCTGCAGGCTCCAATTTAAAAATCGTCTTGCCAAAGACAATCACGAAAAGACTCATTCCAATCTTATGTACACGTGCGCGCTGTGTCCGAGATACATGCTCAGCCGTGCCTCGATGGACGACCATATGCTTAGTGCACACAGGACTAACTATGCGCGGGAAAATAATGCGATCTTGTGCAAGAAAATCGATCTCGATAGTTATGTCGTTAAAGGAGCCAATGGCAGGCAATGTCCATTGTGCAAAATCAACTATCCGAATAACAAAGCTCTCAAGATACATTACCTCAAGGTGCACGAGGGCGGGGCTTGA
Protein Sequence: MNVVDIQNVQNVCRLCLSMEEPKASIFADQASSVSLVMKIQSCLSIEILASDRVSTMICVNCMRRVNKWYVYKEYCLRSQQKLQHCLGDQLENLGNIKVEPMDVYEPPSPLETVPLTTDDELESLPGRRVEAIPMISPAMNHNMTMITAIKREAIDESSALDETNPFASPELLINPMALTGHKEDRLMEADSTQKFMNVKKTIKNSKKKLRRGPHTHFRGIRQFKQRCPHCQIYLHSKYSYANHMKRFHSSKIHERKNNRATNMEEDMDKGHSDENTEEIEDVEDELANLEKDSPLTPVQQNIISQLKTFSCYSCRQSFGDRRSTLNHIRQHMPDLRPYTCIACLTEFADRSIYKLHCGASFQCAMKIALVIPEHGTEKYFTCNMCLRSLSNRKELLSHLSRHSDKQYEQLLAHPFNTPPKLKPMTAFTSSPKENFKTKSKMTEHANHVSAYNKKVIPYPYKSGDPAYNHKCTYCGMIYRYKQNMFKHVTLCKHLPPEVRICYQCVVCGLTFLAFSKFHNHLSSEHKNRDIECSHCRMKFKQSSDFLQHYRDECTIRLTRVNQSSRVCDEEGGWEIENMDSSRPIESGKFGCALCPETVFDTRAKLVDHMKIHSNPTVFSCTICSCTFGNASILEAHMADHEVGIPPPALDDNMSSVPLLEDERNYDINASRFSVQSDLGANNTECNECGKVFANYPNLRRHIRSVHDAIGRFNCFTCALTFVTEEQWQDHVDKEHESTSTMHACPLCPEIFESELSLNDHRRDVHGLNGEAHLACYICGKIFINETSLKIHRGHHFRVNSRLSIGNLQKPSMETDGANDDGEIIIETRKSPTARKSFPNGSPHARLMNFLQCQVCDERFNDVVDLRKHLWDVHCARAKPERNYASQKFQCELCTNVLPDEEGLASHMKWHESNPILSHVENTDNVEEETQCDLCGKYYSSFASMRKHKRRHKLGLLGKHHGQTKKKNDGHVCTICRKVFAGKTTLAKHKEVAHPPRTSASIEDREIIKPVRPRLDFDAIVKNHGVVPKNDEKKSVNCNLCRRVVPNMRALYKHRQRVHKIVIEDDATALRDDYYDSANGDRIVCTVCDKNFSSVGNMRKHFKRLHSTTRVSSQFKCSIEGCRLQFKNRLAKDNHEKTHSNLMYTCALCPRYMLSRASMDDHMLSAHRTNYARENNAILCKKIDLDSYVVKGANGRQCPLCKINYPNNKALKIHYLKVHEGGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057842; iTF_01056256;
90% Identity: iTF_01057842;
80% Identity: -