Basic Information

Insect: Netelia thomsonii
Gene Symbol: Hr39
Assembly: GCA_964017225.1
Location: OZ024920.1:38928377-38933200[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.037 1.8e+02 1.4 5.4 44 167 198 318 183 365 0.73

2 4 4 1.9e+04 -6.3 16.5 36 106 386 457 366 480 0.49

3 4 7.6e-08 0.00037 20.1 0.0 1 21 546 566 546 570 0.92

4 4 1.2e-72 5.8e-69 233.6 0.0 98 408 613 931 580 931 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.037	1.8e+02	1.4	5.4	44	167	198	318	183	365	0.73
2	4	4	1.9e+04	-6.3	16.5	36	106	386	457	366	480	0.49
3	4	7.6e-08	0.00037	20.1	0.0	1	21	546	566	546	570	0.92
4	4	1.2e-72	5.8e-69	233.6	0.0	98	408	613	931	580	931	0.78

Sequence Information

Coding Sequence: ATGTCGGAACAAAACGGGCCCGCGGAGGGCCCGGGCTGGTGGCCTCCGGCACAATCGTGGAAGTCGAACGCGACCTCCGCGTCCTCCTCGTCCACGGTACCAACCTCGCGCACCCTCGACGCGGGAAAAAACGTTTCGGTCACGACGATCAACGTACCACCGGCCCAGGAGATGCACGATGGTAAAAGCGTGTGCAAGTTCCTGGGAggacagaacggcgtgaccgtgtcCGTGGTCTCGAGTTGCGGAAGTGGTCCAACGAGCGGCATGGGTGGCGCGAGCGCGTCATCCTCGTGTCCCGAGACGAGTTCCCTGGACGATCTCGAGGACAGCGACGGTGAAGTGAGCAAGATCGATTTTCGTGGTGTCAATCTACGCACGAAGAAGAAGCGTGACGCGACGAGCGGTGGAACGGAGAACGAGTGTGGTGCCGTAGGTGCTGACAATCTCGATCATCAGCAGCCCGAGAGACCGATGTCGTGGGAGGGCGAGTTGTCCGATCAAGAGATGTCTTCGAACACGATCACCAATCAGGACCACGAGGAAACATCGATGGAAGGTGTTCAGGTATGCGGTGCGAGTCCCGGACCTCAGGAACAAAAATTCCCAATAAAACCCGAGCCGGATTTTCGCTCGAGTCCGAGTCTCGTCATTAATTCTCACAACGATGGAAGTTTGCCGCTCTCTCACGTTCAACAGTTGCAACAACAGCAGCGCGGTCTCGATTCCCTGGAGCAAACTCAACAGAGCGATCTGCCATTGCTGGTTGGAAAGTTACTCGGTGGTTACAACAGTTCTACACCGAATCACAGTCCGATATTGAATCCTCGTCATCATTTGACGAAACACGGTCATACGAGATCGCAAGTACCGTCGCCGGATTCCGCGATACATTCGGCGTACAGCGTTTTCAGTTCACCGACGCAGAGCCCGCACGCCGCTCGTCATTCCGCCCTTGGTCCCGGTAGTCCGGTACCATCGTCCTCCCTCTCGCTGTCTCGTCACAGTTTCAATAATTCCACGTCGTCGCTGTCGCTCTCATTGTCCCATTCGTTGTCGCGCAACAATTCGGACGCCTCGAGCAGTTGTTACAGCTACGGTTCGCTCAGTCCACCGACTCACTCGCCCGTTCAACAACCTCGACACTCGCACGCTCagcatcatcagcatcatcatcatcaacagcaacaacagcaacagcagcagcaacaacaacagcagcagcagcagcaacagcaacagcaacaaattCCACAAGCCGGAAGTCCTTTGCATCTTGCATCGTCGACgggaccaaattctcatcattaCTCGACGCAAGGCTCGGAAATATCGTCCGAGGGTGGTCATCCCGAGGATCAGGAGGATTGCAAGATACCGACTGCGACATCGGGAATATCGACGAGACAACAGCTCATCAATAGTCCTTGTCCCATATGCGGGGACAAGATAAGCGGTTTTCACTATGGTATATTCTCGTGCGAATCCTGCAAGGGTTTCTTCAAACGTACCGTCCAAAATCGTAAGAATTACGTTTGCCTTCGTGGCGCCGGTTGTCCCGTGACCGTTGCTACGCGAAAGAAATGTCCGGCTTGTCGTTTCGACAAGTGTCTCAATATGGGAATGAAACTCGAGGCTATAAGGGAGGACAGAACGCGAGGGGGTAGAAGCACGTATCAGTGTACTTATACCCTACCGGCGAATTTGATCGGTGGCTCGGGCGGTGGTATGTCCGGTGATAAAATGTCAGGCGGTAATTGCAGTCCCGCCCCACCTGGCTCGGAGCATCATCATTCCGTCAGACATCATTGGAATCATTCGCACAAGATGCAAGTTGTACCACAATTGTTGCAGGATATTATGGACGTCGAGCATCTTTGGCATTACAACGACAACGATCGGGTCACCGGGGGAAGTCAGAGTGGAGGAGGTCACGGTGGTAATGGTTTACCAATGACGAACGATATGCCGAGTGGTCTCGGGGCTGGTCTAGGTTCCAGTGCTGGCAGTGGAAGCGTAACGAGCACGAGCAACGGTAACGTCGATAATCGTTGCGAAACAACGAGATCGAGCAACGTAACTTCCGCTGGAAACAACGAACATCAGactcagcagcaacaacagcaacaacaacaaagttCAACGACGAACAATCCTACCAACGGTAGCACCTCCAATCCAAATGGCAATGCGACGCAAAATCCTGACTTTCTCTCGAATCTTTGCAACATCGCGGATCATCGTTTGTACAAAATCGTCAAGTGGTGCAAGAGTTTGCCACTTTTTAAGAATATATCGATCGACGATCAGATATGTTTGTTGATTAATTCTTGGTGCGAATTGTTACTGTTCTCGTGCTGTTTTCGTAGTATGAGCACACCGGGTGAAATTCGTGTCTCGTTGGGAAAATCTATTACGTTGGAACAAGCGCGACAATTGGGCCTGGCAACTTGTATCGAGAGAATGCTCGCGTTCACGAATAATCTTCGACGACTAAGGGTCGATCAGTACGAGTACGTGGCGATGAagGTTATCGTATTGCTCACGTCGGACACGAGCGAACTCAAGGAACCGGAGAAAGTTAGAGCGTCGCAAGAAAAAGCACTTCAGGCACTTCAGCAATATACGATCGCGAGGTATCCGGAAATGCCCGCGAAATTTGGCGAGTTACTTTTACGAATACCGGATCTTCAAAGAACCTGCCAGGCTGGCAAAGAGTTGCTAAGTGCCAAACGCGCCGAGGGTGAGGATAGTTCTTTCAATCTGTTGATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence: MSEQNGPAEGPGWWPPAQSWKSNATSASSSSTVPTSRTLDAGKNVSVTTINVPPAQEMHDGKSVCKFLGGQNGVTVSVVSSCGSGPTSGMGGASASSSCPETSSLDDLEDSDGEVSKIDFRGVNLRTKKKRDATSGGTENECGAVGADNLDHQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPSLVINSHNDGSLPLSHVQQLQQQQRGLDSLEQTQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHGHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGPGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHAQHHQHHHHQQQQQQQQQQQQQQQQQQQQQQQIPQAGSPLHLASSTGPNSHHYSTQGSEISSEGGHPEDQEDCKIPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGSGGGMSGDKMSGGNCSPAPPGSEHHHSVRHHWNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRVTGGSQSGGGHGGNGLPMTNDMPSGLGAGLGSSAGSGSVTSTSNGNVDNRCETTRSSNVTSAGNNEHQTQQQQQQQQQSSTTNNPTNGSTSNPNGNATQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEDSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_01056843;
80% Identity: iTF_01056843;