Ntho004972.1
Basic Information
- Insect
- Netelia thomsonii
- Gene Symbol
- dmrta2
- Assembly
- GCA_964017225.1
- Location
- OZ024921.1:3339969-3341452[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.26 1e+03 -0.2 0.1 7 13 9 15 7 20 0.80 2 2 9.8e-26 3.8e-22 78.0 10.9 1 47 23 69 23 69 0.99
Sequence Information
- Coding Sequence
- ATGGATAGTGAACGGAGTATGGAAGAGTGTCGAAATCATTCATCACCAACGGAGCATCAACGTCTGAGAAGTCCGAAATGCGCAAGATGCCGAAATCACGGTATTATTTCCGGTCTCAAGGGACATAAGAGATCCTGCGCGTGGAAGGACTGTCGATGTCCTTGCTGTCTTTTGGTCGTAGAACGACAGCGCGTTATGGCAGCGCAGGTAGCGCTTCGCAGACAGCAACAGGCTCACGGTAATTTCATCAATGAGAAATCGACCGTTGAACAACCCCGAGGCATCAACAACAATAACGCACCGCATCGTCCATCAGcgacaacagcagcagcagcgacttaTCAGCGAAGATTGCGAAATTTTCAACGACATCAATTGCAACTTACGCAAACGAGGATAAGCGtgacgcaaaattttcaaagtcTGAACGCCATTCAGACACTTCCCAATGGCTTGATTCCGAACGCTCGCCTACTCGGATCCATACCTCGACTCGAGACTGGAGACCGGAAACCGAACGTGGTCGGCACAACGTCGATGGAACTTCGGCCTTTCTATCAAACCGGATATTCGGACGTACCCTGGTTCAGTTGCATTCCGGAAGCTTCGACCACTGGCCCTGATTTCAACAATCTCGTATTCTCCGGCGCTGATTGCCACGATAATTCATCCTCGGACAGAGACGAGATTGGGCCCGGTCGTACGACAAAAAAGTCGCCGATATCGTTTAGCGTCGAATCGATCATCGgtcgaaaataa
- Protein Sequence
- MDSERSMEECRNHSSPTEHQRLRSPKCARCRNHGIISGLKGHKRSCAWKDCRCPCCLLVVERQRVMAAQVALRRQQQAHGNFINEKSTVEQPRGINNNNAPHRPSATTAAAATYQRRLRNFQRHQLQLTQTRISVTQNFQSLNAIQTLPNGLIPNARLLGSIPRLETGDRKPNVVGTTSMELRPFYQTGYSDVPWFSCIPEASTTGPDFNNLVFSGADCHDNSSSDRDEIGPGRTTKKSPISFSVESIIGRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01056012;
- 90% Identity
- iTF_01057669; iTF_01056012;
- 80% Identity
- -