Ntho017243.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Netelia thomsonii
Gene Symbol
dl
Assembly
GCA_964017225.1
Location
OZ024925.1:13640583-13642298[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.5e-73 3.6e-69 232.2 0.0 1 169 23 192 23 192 0.99
2 2 1.2 5.9e+03 -2.8 0.1 104 111 476 483 439 520 0.54

Sequence Information

Coding Sequence
ATGATTTCGGGTGGTGGTATGGAAACGTCCGAAATGACCGTTACCTCAGACTCGTCGTGTCCTTACGTGGAAATTGTCGAGCAGCCGGCGAGCAAAGCGCTGCGTTTTCGTTACAAGTGCGAGGGTAGATCGGCCGGTAGTATACCAGGCGCCAACAGTACACCGGAGGTCAAGACATGTCCGACGATAAGGATAGTTGGGTATCAAGGTCGAGGTGTCGTCGTAGTATCCTGCGTAACCAAGGATCATCCTTATCGGCCTCATCCTCACAGTCTCGTCGGCAAGGACACGTGCAAGACCGGTGTCTGCCGCATGGAGATAACACCGGACAATCCATTAGTGAGTTTCACGAATCTTGGTATACAGTGCGTCAAGAAAAAGGACATTGCCGAAGCGTTGCGCGTACGTCAAGAGATTCGCGTCGATCCGTTTCGAACGGGTTTCGAACACGCGCTACAGCCTACCGATATCGATTTAAATTCGGTAAGATTGTGCTTTCAAGTGTTCATCGAGGGTAGAGATGGAAAGATAAATCTGCCGTTGAGACCGGTGGTGTCCGAGCCGATTTACGATAAGAAAGCGATATGCGATCTGATGATATGTAAAATGAGTCATTACAGTGCGACCGTCGCCGGTGGTATGGAAATGGTGATACTGTGCGAGAAGGTCGCGAAGGACAATATACAAGTGAAATTTTTCGAGAAAAGGGACGGTGTCGAGGTATGGGAGGGTTACGGTGACTTCAAATCGATCCACGTGCACAAACAGGTAGCCATAGCTTTCCGTACGCCCAGTTATCGGCATCGGCAAGTGGATGAACCGGTTCAGGTTTACGTACAGCTGAGACGACCGACCGACGGTGGCACGAGCGAACCGTTGCCTTTCAAGCTGTTACCACTGGGTGCCGACGATCACgattttttgcgaaaaaaacgTCGCAAGTTCGAGGAGAGTCCACGCGCTCTCGTCTTACGGCACATACAGGCCGATGCGGAGAGACAGGGTGCGTTATTGAATGAACCACCTACCGAGTACAATTTCGATCCCCTGAAACTCGAAGCGAGGGTACGTTCTTTTCCCGTTGGTACGGGAATTTCGGCTCCGGGCGTCCCGTCGCTTTACGGCACGGTTCGAAATCCAAGTCTCTTACCGGTCAGTCCGCTCGTGGACGTACCGTCTTACGGGGAACAGGCTTCGCCCGTTGGCCAAACCTCGCCACCGATGGGTTATGCCCATTACGAGGTGCCGTACGCGCTGAATCAACAGAGAAACGCGAGCGAACCGTTCGAAGCGGCTCACAACAATCAAGGATGTCCTCAGCAGCAATCGGTATTGAACGTTCATCAAGTCGGTGCTTCTCATTGCGCTGGTTACTGTCAACAACAACAGGCCCAACACCGACAGCAGGATCTCGTCCTGCAGAAAATCTCAATGAATCAACATATGGCCCAGCGTAACAACAACAATCATGCCGAACTCGATGGGGGGATCGGTAACGCGAGTCTGATGGACGTTAACGCGCAACAGCACAGCTTCGACGCGAGTCTCAATCAGTTGGATTCCGCGGAACTCGCGGCCTTCGGCATCGCGCTTTCGGAAACGCTCTCGAGCGGACTCTCGATAACCGATCATCCGGTTAAAATGGAACCGAGCAGGGCAGCCTCGAGCACGATGCCCGTGAGCGTCGGGGCGGCCGCTTCCTGGTGTGACATGTAG
Protein Sequence
MISGGGMETSEMTVTSDSSCPYVEIVEQPASKALRFRYKCEGRSAGSIPGANSTPEVKTCPTIRIVGYQGRGVVVVSCVTKDHPYRPHPHSLVGKDTCKTGVCRMEITPDNPLVSFTNLGIQCVKKKDIAEALRVRQEIRVDPFRTGFEHALQPTDIDLNSVRLCFQVFIEGRDGKINLPLRPVVSEPIYDKKAICDLMICKMSHYSATVAGGMEMVILCEKVAKDNIQVKFFEKRDGVEVWEGYGDFKSIHVHKQVAIAFRTPSYRHRQVDEPVQVYVQLRRPTDGGTSEPLPFKLLPLGADDHDFLRKKRRKFEESPRALVLRHIQADAERQGALLNEPPTEYNFDPLKLEARVRSFPVGTGISAPGVPSLYGTVRNPSLLPVSPLVDVPSYGEQASPVGQTSPPMGYAHYEVPYALNQQRNASEPFEAAHNNQGCPQQQSVLNVHQVGASHCAGYCQQQQAQHRQQDLVLQKISMNQHMAQRNNNNHAELDGGIGNASLMDVNAQQHSFDASLNQLDSAELAAFGIALSETLSSGLSITDHPVKMEPSRAASSTMPVSVGAAASWCDM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01055742;
90% Identity
iTF_01055742;
80% Identity
-