Basic Information

Insect: Netelia melanura
Gene Symbol: -
Assembly: GCA_964007305.1
Location: OZ023258.1:2363757-2365872[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.012 1.4 10.1 0.6 2 23 140 161 139 161 0.98

2 14 4.2e-05 0.0049 17.9 2.4 2 23 174 195 173 195 0.98

3 14 5.7e-05 0.0067 17.4 2.0 2 23 202 223 201 223 0.97

4 14 1.1e-05 0.0012 19.7 1.4 2 23 294 315 293 315 0.97

5 14 9.1e-07 0.00011 23.1 0.5 1 23 348 370 348 370 0.97

6 14 9.5e-07 0.00011 23.0 1.8 1 23 376 398 376 398 0.96

7 14 3.6e-05 0.0042 18.1 0.6 1 23 404 426 404 426 0.98

8 14 3.7e-05 0.0043 18.0 5.3 1 23 432 454 432 454 0.97

9 14 9.3e-08 1.1e-05 26.2 1.0 1 23 459 481 459 481 0.97

10 14 0.00025 0.03 15.4 0.2 1 23 487 509 487 509 0.97

11 14 1.1e-07 1.3e-05 25.9 3.9 1 23 515 537 515 537 0.96

12 14 4.8e-06 0.00055 20.8 1.6 1 23 543 565 543 565 0.98

13 14 1.9e-05 0.0022 18.9 1.1 1 23 571 593 571 593 0.94

14 14 0.00041 0.047 14.7 1.8 1 23 600 623 600 623 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.012	1.4	10.1	0.6	2	23	140	161	139	161	0.98
2	14	4.2e-05	0.0049	17.9	2.4	2	23	174	195	173	195	0.98
3	14	5.7e-05	0.0067	17.4	2.0	2	23	202	223	201	223	0.97
4	14	1.1e-05	0.0012	19.7	1.4	2	23	294	315	293	315	0.97
5	14	9.1e-07	0.00011	23.1	0.5	1	23	348	370	348	370	0.97
6	14	9.5e-07	0.00011	23.0	1.8	1	23	376	398	376	398	0.96
7	14	3.6e-05	0.0042	18.1	0.6	1	23	404	426	404	426	0.98
8	14	3.7e-05	0.0043	18.0	5.3	1	23	432	454	432	454	0.97
9	14	9.3e-08	1.1e-05	26.2	1.0	1	23	459	481	459	481	0.97
10	14	0.00025	0.03	15.4	0.2	1	23	487	509	487	509	0.97
11	14	1.1e-07	1.3e-05	25.9	3.9	1	23	515	537	515	537	0.96
12	14	4.8e-06	0.00055	20.8	1.6	1	23	543	565	543	565	0.98
13	14	1.9e-05	0.0022	18.9	1.1	1	23	571	593	571	593	0.94
14	14	0.00041	0.047	14.7	1.8	1	23	600	623	600	623	0.92

Sequence Information

Coding Sequence: ATGGATGCACTAGCTATATGCAGTCAGGTTATGGATGAGAACATTGTCACGGTCGTGCTTAAGGAAGAACCCGGTGAGAGATACGGTCAGTCTTACATCGAGGATATCTGCACGGGAACATTTGGAAAGGTTTTCCTACCGATCGACAGTCATGAAGGGGATTTCACGGATGAAATGGTCAAGCTGGAACTAGAGAGTCAATCGAGCGGACATCATTGCTGGGCTGCTCAATTAGCGACTACGACATTGTGCTCGGGTTCGCAGACCGACGAATCGAGCCAAAAATCCGCAGATCGTGAAGACCTGGAGGAGCAGGAAGGCGAGGAGGAGGAGCGCGTCGTTGAGGAGGAACATTGTGACAACACGGAACAGGACAAAGACGACGATTCTCCGGATCAGCCAAAATTCTACAAGGTCCAGTGTACCATCTGCAAAAAGTGGTTCCTGAACAACGACTCGATGATAACTCATCTGCGAACTCACTGCGGTGGCAGTGGAAACGTCGCTGCTGGTGGCGATCAGTGTCAAGTATGTCACCAGACTTTCCAAGATAACGCGAGTCTTCACGCCCATATGTTGACGCATGTGGGCATGAATCCAGTCGAGTGCAACGTCTGCCAGAAGAGATTCGCCTATAAATGGTGTCTGAGAAATCACGTGCAAACGCACGCAACGACCAGCAACAATTGTTGTCCAACTGGAAGTGGCGTCGTGGTCGTTGCGAATTCCGAGCAACCCGGTGCAGCGATTGGTGCTGGTTACAATTTCGACAATGCGAACACCGAGGCAAcaagaaaaatgtacgaacGTACGAATCTCGTCGACGACAGACGAAAAGATCCAATGAACAAAGTCGAGAACGAGTCTCGAGGTGGTTTACGTTGCGATATCTGTAAAATGCGTTTCAAAGATCGGGACACGCTCAATCGGCACACGCTGATGCACATGAGCGAAACCCCTTACAAATACGACGTATTCTCAGCAACTTTCCGGGACAAGCCAGATCCAGATATGCGCACGAACACTCAAACAACGAAACAATTCAAATGCACACTGTGCGACAGATCTTTCGCCCAGAGAACCGCTCTTAACAATCACATGTTGGCGCACAGCGGTGAGAAACCTCATGCCTGCAATATATGCGAGAAAACGTACAAAAGGAAATCCGAGCTCATCAGACACACCATGGTACATACAGGCGAGCGACCCTACGAATGCAAGGAGTGCCTCATGACCTTTCGTGAAAAAGCGAAGCTCAATTCTCACATGCTTGTTCATACTGGAGAAAAACCACACGAATGTTACATTTGTCACAAGGCTTGTGCACGTAAATCGGATCTCAACAGTCACATGCTTTCACACACCGGTGGCCAATATGATTGCAAAGTCTGCGACAAAATATTTACTCGCAAATCGGATCTCAACAGGCACACTCTCATACACACCGGTGAAAAGCCATTCGCTTGCGAATTGTGCGACATGGCCTTTCGCGAAAGAACCAGGCTCAATTCCCACATGCTCGTACACACTGGAGATAAGAGACACGCTTGCCACATATGTGGCAAAACATTTAGGGAAAAATCCAGCCTGAAGAAACACATGCTCGTACATACAGGGGATCGTCCTTACGAGTGTTTCGTTTGCAAGAAAACTTTTACCCAAAAAACTACTCTGAACAGTCACGTACTAGTTCACACAGGTGAACGTCCGTACGAGTGCGAAACGTGTCCTAAGGCGTTTAGGGAACGCTCTTCATTGAGAAAACATTCTTTATTTCATACTAGTAACGATAGGGGACACGAGTGCAATGTGtgtttcaaaaaatttacTCACAAGTCTGCTCTTGGCTCGCATGCGGCGATAGATCATCCCTCATAG
Protein Sequence: MDALAICSQVMDENIVTVVLKEEPGERYGQSYIEDICTGTFGKVFLPIDSHEGDFTDEMVKLELESQSSGHHCWAAQLATTTLCSGSQTDESSQKSADREDLEEQEGEEEERVVEEEHCDNTEQDKDDDSPDQPKFYKVQCTICKKWFLNNDSMITHLRTHCGGSGNVAAGGDQCQVCHQTFQDNASLHAHMLTHVGMNPVECNVCQKRFAYKWCLRNHVQTHATTSNNCCPTGSGVVVVANSEQPGAAIGAGYNFDNANTEATRKMYERTNLVDDRRKDPMNKVENESRGGLRCDICKMRFKDRDTLNRHTLMHMSETPYKYDVFSATFRDKPDPDMRTNTQTTKQFKCTLCDRSFAQRTALNNHMLAHSGEKPHACNICEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECYICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACELCDMAFRERTRLNSHMLVHTGDKRHACHICGKTFREKSSLKKHMLVHTGDRPYECFVCKKTFTQKTTLNSHVLVHTGERPYECETCPKAFRERSSLRKHSLFHTSNDRGHECNVCFKKFTHKSALGSHAAIDHPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057817; iTF_01057074;
90% Identity: iTF_01057074; iTF_01057817;
80% Identity: -