Nmel019102.1
Basic Information
- Insect
- Netelia melanura
- Gene Symbol
- retn
- Assembly
- GCA_964007305.1
- Location
- OZ023258.1:13403694-13410928[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-19 2.7e-15 57.1 0.0 16 89 11 82 3 82 0.93 2 2 9.5 2.6e+04 -3.7 0.0 26 38 244 256 227 257 0.73
Sequence Information
- Coding Sequence
- ATGTCAcgtgtttgtttatttcgtcTGCTTTCAGGATCTCCGATCAATCGTTTGCCAATAATGGCAAAATCGGTGCTCGATCTGTACGAGCTGTTTCAGTTGGTAATAGCCCGGGGCGGCCTCGTCGACGTTATAAACAAGAAACTCTGGCAGGAAATTATCAAGGGCCTCCACCTGCCGTCTAGTATCACGTCGGCTGCATTCACGCTGCGAACCCAATACATGAAATATCTTTATTCGTACGAGTGTGAAAAATTGAGCCTTTCGACACCGACGGAATTGCAAGCGGCCATTGATGGAAATCGACGAGAAGGACGCAGAAGCAGTTACGGGACTTATGGCGGCGGAGGGGGCGGTGGCGATGGTATGATCCAGAGAAATCCACACACACCGGGCTCCATGGCGTTACATGCCCAAATGTCACCTCTGTCGCTCGTCTCGGCCGTCGGAGGTGGACAACATCATGGCTCGCAATCACTTGTCAACGGTAGCGCGGTTCACACACCTCTGCCACATCATGCCCATCATCCGCAGCATCCCCAAGGTCCGATAGGTCCGATACCAGGAATGGCACCGGCTGAATTCGAAGCCCGAATGGTCGAATACGTGAAGCTACTGAACAAAGAATTAAGAAGCGTTGGTGGCGCCACACCACCGCCTATGATACATCGACAGGGTAGCGCTTCACCACCGTCGTCAACGCCACCGCGCGACAACGCCTTCAGCGCTCTCGAAATGTCGCGACTCACGCTATGGAacttatacaataataatacactGTATCCTGGCGTTGGTCATCAACCACCTCTGTCGCCGCAAACCTCGAATTCGCCACATCCCCAAGCTGCGAGCCCCGAACCACAGAGAGAAGCCCTCGATCTTGGTCTCAGATCATCACCTCTGTCGTCGTCACCGACGAGACACAGTCCACCCTCGTCGAGCAGTAGCATTCACGTGAAGAGGGATCAAGATCTCACGGGCAGACCACCTGGTCCACCACCTGCCAAGAGACTACTTTCGGACGACGATAGTCCTATCGAGAAGAGCGTACCGGCACTGGCAGGCACTCACATCAAGATCTCGAATCGTGgCGACGGTCGAAACGGCGATAATTCTCTCGTTGTCAGTATGGAGCTGAATGGAGTCATGTACCAAGGTGTTCTATTCGCACAGACGGACGGCAGGAGTACGGCGAGCGCTACTAATAATAACACAAAAGCGGCGCGAAGCATCGTCTCGTGA
- Protein Sequence
- MSRVCLFRLLSGSPINRLPIMAKSVLDLYELFQLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYSYECEKLSLSTPTELQAAIDGNRREGRRSSYGTYGGGGGGGDGMIQRNPHTPGSMALHAQMSPLSLVSAVGGGQHHGSQSLVNGSAVHTPLPHHAHHPQHPQGPIGPIPGMAPAEFEARMVEYVKLLNKELRSVGGATPPPMIHRQGSASPPSSTPPRDNAFSALEMSRLTLWNLYNNNTLYPGVGHQPPLSPQTSNSPHPQAASPEPQREALDLGLRSSPLSSSPTRHSPPSSSSSIHVKRDQDLTGRPPGPPPAKRLLSDDDSPIEKSVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDGRSTASATNNNTKAARSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129126;
- 90% Identity
- iTF_01056577;
- 80% Identity
- -