Ncom006404.2
Basic Information
- Insect
- Neria commutata
- Gene Symbol
- dl
- Assembly
- GCA_963457695.1
- Location
- OY735246.1:5870967-5874870[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-74 7e-71 238.1 0.0 1 169 70 240 70 240 0.99 2 3 0.59 2.9e+03 -1.5 1.0 87 134 396 443 387 483 0.58 3 3 0.045 2.2e+02 2.1 0.1 33 67 650 685 643 688 0.85
Sequence Information
- Coding Sequence
- ATGTACCAGAATCCGAATCCTGCCAATAATAGCGTGACCGaggctgttgctgccgctggcaGCAATGCCACTGGCACTGCCATGGATGccgcacagcaacagcagcaacaacaacagcagtcgAATATTAACTACAATGgcctgcaacagcaacaacaacagcaacagcctaCAAATGCCAACCGCAGCATACGCAAGAAGCCTTACGTCAAAATAACCGAACAACCCGCTGGCAAAGCGCTGCGCTTCCGCTACGAGTGTGAGGGTCGTTCGGCTGGCTCGATACCCGGTGTCAATTCGACGCCGGAGAACAAAACCTATCCCACTATTGAAATTGTTGGCTACAAGGGCCGCGCCGTCGTCGTGGTGTCCTGCGTGACTAAGGACACGCCCTATCGACCGCATCCCCACAACTTGGTAGGCAAGGAGGGCTGCAAAAAGGGCGTCTGCACGCTGGAAATCAACAGCGAAACCATGCGCGCCGTCTTCAGCAATTTGGGCATACAGTGCGTCAAAAAGAAGGACATTGAAGGAGCGCTGAAGGCGCGCGAAGAAATACGCGTCGATCCGTTTAAAACGGGCTTCTCGCATCGCTTCCAGCCCTCGAGCATCGATTTGAATTCGGTGCGTTTGTGCTTTCAAGTATTCATGGAGAGCGATCAGAAGGGCCGTTTCACGCAGCCGCTGCCACCCGTCGTCTCGGATCCCATTTTCGATAAAAAGGCCATGTCGGATCTGGTCATTTGCCGTCTGTGCAGCTGTTCGACCACTGTGCTCGGCAACACACAGATCATACTGCTGTGCGAGAAAGTAGCCAAAGAGGATATTGCGGTGAGATTCTACGAGGAGAAGAACGGACAAGTGGTCTGGGAGGCACTGGGCGAATTTCAGCACACCGATGTACACAAGCAGACTGCCATTACCTTTAAGACGCCCCGATATCATACGCTCGACATTACTGAACCGGCCAAGGTTTCAATACAATTGCGACGACCATCGGATGGAGTTACCAGCGAACCGCTGCCCTTCGAATATGTGCCGCTCGATTCAGGTAGGCATACGTTCTGGAATATGCGTCGGAACCTTAAGAGGAAACCCGACCTAGACATATTCCAGCAAATACTCGCTGTGGACAGTGAGATAAAGCCCATAGAAGTAATTAATTTAAGCACACCAACCGCGGAGGAGCAGAATGTTGCAGATTTCAGCGTTGTGCCCATGTCGTGCGCGGAGGATGAGGAAGCTGCTAAGCGTCGTAATGAACATGAGATCGATACGATCATCGATGAGAAGGTGCGTGAgttagaacaacaacaacaacaacagcaacaattgcaacatcAGCCAACGCAAACTGCCATGATTGATACGGTGGTCATCGATGAGAAGATGCATGAGctggaacaacaacaacaacaagagccaACGCAAACAGCAGTTGATTGCATGGTGGTGCAGGCGCCAACACAAGCATTGCCCGTTGAGGCAGTGCAGCTCTCAGCCAGCGATAAGATCACTGAGTGGATGAATTCCAATGAATTGGAACAAACGGACGATGGTGCAGCTACTCCCTCAAGTGAGCCAAGCGTAGCCACTACGACTATCGAAACAGCTACCTTACCTTCAGCAGCCATTGACGAGGATAAAACTTTGAACGATCTGCTGGACCAGGTCGCCGAACTCGATGAGATCTACACCGATCATGTATTGCGTCGGGACACCTACAATAACACCATAATGCACGAGCTGAGCGGCATGGACGCTTGTGAGCCGGAAGCAAGAGATGCCATTGCCGATGGCGGCCAAACGGCCATGGACATTGACATTGATGACAACTTCGacgatgctgcgacatacaccAGTTTGCAGTTGGCCTTCAAAAACCCCATTGCAATACAAATGGATGACATAATGCCGCCCACACCGCCTGGTTCAAATCTGGCGCCTGAAGATGCACAGCATTACGATCACGTCGAGGTTATGTCCTATCATCTCGCGCAGAATGTCGATGTGAATGTAGTcagcacaagcagcagcacgCACATGCCGCACTCACCGCCAAGACCAGCGCCACCAAAATTCGGTTCCCCCCACATGCATGTTACCGCCGCGGAGGAGGAGAAGTTGCCTCCGCTGCCTCCGAAACGCTTACGCAAGCAAGACAGCAACGCGGAGAATCATTCAAACGAGGCGAATTCAGCGGACGCTGCGCCCGAGCGCAAGGCACGCCAATCCGCACCCATCATCATAATGAGAACGCCCGATCAGTCGCCGCCGACGAAGCGTCTGCCGCCCAAGCcgggcagcagcaattgcaacaCTTTGCCGAAACAGAAGAAACCCGGCTTCTTTTCGAAGCTGTTCTCGCGCCGCAAAAGCAAATCGGATCTGAATCAAGCTAGTGAGCAGAATTCGCTAGTCGGCTCCAAAACTACTACTCCGATGGGCAGTCGCGAGCCTAGCATTGGTCATTTCCAGATGAACGATCCCAATCGCTCGTCCATACGCTCGGTGAAGTCGCTACAGCCGAGCTCGCTGCCCACAAGTCCCGAACGCAAGGCGCCGAAGGTCGGCAAGCCGGTGGGACGTAGCATCAGCAGCGTGTCCGGCAAGCGTTCAGCGCATATGGACGCCGACGTCATACACATACCGCTGAAGGGCGACAGCGTCAACAGTCTGCCGCACAATAAAGCCTACTCGAACTCCAGCACCATAACGTTGGGCAACACGCTCGATCGGCGCACAGTGTCCGCGCTGCAGCTGGCCGACATACCCATCTCCGATGGCAACATGGAATTAGTGGCCATCACCGATCGTCAGAGTCTGCGCAATCTCTGCGAGGGCGAATTCAATGTGCAGCTAGACCCCGATGTCGATCTGACCGAGGCGGAGCACTATGCGCTCTACACGAGCATACCGCCGCAAGCGACGGCCAGCGAATTCGACGATACCTCTGCGTACTACGCAGCCGTCGACGCGGGCGAAATATTGACACCCGAAGAGATAGCGCGACGCTTGGCGGCGGCGAATCGTATAAACTGA
- Protein Sequence
- MYQNPNPANNSVTEAVAAAGSNATGTAMDAAQQQQQQQQQSNINYNGLQQQQQQQQPTNANRSIRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEGALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESDQKGRFTQPLPPVVSDPIFDKKAMSDLVICRLCSCSTTVLGNTQIILLCEKVAKEDIAVRFYEEKNGQVVWEALGEFQHTDVHKQTAITFKTPRYHTLDITEPAKVSIQLRRPSDGVTSEPLPFEYVPLDSGRHTFWNMRRNLKRKPDLDIFQQILAVDSEIKPIEVINLSTPTAEEQNVADFSVVPMSCAEDEEAAKRRNEHEIDTIIDEKVRELEQQQQQQQQLQHQPTQTAMIDTVVIDEKMHELEQQQQQEPTQTAVDCMVVQAPTQALPVEAVQLSASDKITEWMNSNELEQTDDGAATPSSEPSVATTTIETATLPSAAIDEDKTLNDLLDQVAELDEIYTDHVLRRDTYNNTIMHELSGMDACEPEARDAIADGGQTAMDIDIDDNFDDAATYTSLQLAFKNPIAIQMDDIMPPTPPGSNLAPEDAQHYDHVEVMSYHLAQNVDVNVVSTSSSTHMPHSPPRPAPPKFGSPHMHVTAAEEEKLPPLPPKRLRKQDSNAENHSNEANSADAAPERKARQSAPIIIMRTPDQSPPTKRLPPKPGSSNCNTLPKQKKPGFFSKLFSRRKSKSDLNQASEQNSLVGSKTTTPMGSREPSIGHFQMNDPNRSSIRSVKSLQPSSLPTSPERKAPKVGKPVGRSISSVSGKRSAHMDADVIHIPLKGDSVNSLPHNKAYSNSSTITLGNTLDRRTVSALQLADIPISDGNMELVAITDRQSLRNLCEGEFNVQLDPDVDLTEAEHYALYTSIPPQATASEFDDTSAYYAAVDAGEILTPEEIARRLAAANRIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -