Ncom006813.1
Basic Information
- Insect
- Neria commutata
- Gene Symbol
- bun_1
- Assembly
- GCA_963457695.1
- Location
- OY735246.1:12421612-12423329[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-30 6.5e-26 90.7 6.6 2 56 10 64 9 65 0.97 2 2 1 2.5e+04 -6.7 6.8 52 52 83 83 66 109 0.63
Sequence Information
- Coding Sequence
- ATGCCTCATCTTGGCTTTATTGTTAAAgATCTGGTCAAATCCCATCTTATGATAGCTGTTCGAGAAGAGGTCGAAGTCCTCAAAGAGAAAATATCCGAACTCATGGATAAAATCAATCAGCTGGAAGTGGAGAATACCATATTGAAGGCTAATATGTCACAGGAGACGCTTAAGcagttgcaaatgcaaattgcgGCAGCGccaccacaacagcaacagcagacgcagccacagcagcagcaacaacaacaaccacaggtGCAGCAGCAAACACAGCCGCAGGTGGCGCAGCAACAGACAGTGCCGCAACAAACAGCACAGAGCCAAGATGGCGGTGCCAACGTGAACGCGAGCGGCCAGGATGCTCAACAGTTGGGTCAAcagaacagcaacagcaacaacgcaaATTGA
- Protein Sequence
- MPHLGFIVKDLVKSHLMIAVREEVEVLKEKISELMDKINQLEVENTILKANMSQETLKQLQMQIAAAPPQQQQQTQPQQQQQQQPQVQQQTQPQVAQQQTVPQQTAQSQDGGANVNASGQDAQQLGQQNSNSNNAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -