Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963691935.1
Location
OY829914.1:256325701-256346064[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-15 1.3e-11 46.6 0.0 2 89 326 407 325 407 0.91

Sequence Information

Coding Sequence
ATGAAATATGAACGTGAGCACAACACCAAACGCAATCAAGAAAAGGATGAAGTAATTGCCATATCGGACAAAGTAATAATCCGGGCCGATGATCTTATATCATGGATTGATGCCGATGCAGAATGGAATTGGGGCCTTGAAGCTGTATATACGGGCGGTGGTACCGGCGGCGCCAATCCCATAGTACCAAACCAATCAAATCGTTATCTGCTGCGCAATTCACATTTAGATTTTACCGATGTCgaaatcgaaaaacaatttgAACAAAATCGACGAACAAATGTTGCGGTACTAAGCTACTCACGATACTGTCGATATCGTGCCACCCTAAAGCGATTGGAAAACGTTACTGATGTTCAAGTTCGAAATACGTTAATTGATGCGCTTAGTGGATTTTCACCGACTTGTATTAACACCAGGATTATGTTTTGCAAGGACACGTTTGATTACCCGGAACTGGAGACACACGATTTGTTGTGTAATCATTTAGCGCCAAAATTAAAAGGACGCCCGAGGGGCCGAAGGAAGACCACTCGGTCGGAAAATTCACCTGGTAAACCGCGAAGCCCTTCGCTAAGTGATTCCAATGAGTCGGAAGAATCAGAATGCTCGGTTCGTGCCCGTAATAGACCTGAAGTAAATCAACGGCATAATCATCGTCCAGCTCGAACTAAAACAAGGTCAGAATGTAGTGAAACTACATTTGTAGCGGCTGCACCATCTCCTAAACCGAGGAAACCTATTAAGTTGACGGTGCGTGGTACGTCAACGAAAAATATGACAATCGTTAAGTCGGAAGAGGATGAGGAAGAAATTGACGAAGGTAGCGTAAAAGAACAGAGCGACCAACTAGAAGAGAAAAAACCTAAAATTGAGGAACCCGTCGCAGCAGAAGTAAAACCTGAGGTAGAAAACGTACCTAAAATACGGACGGAAGCAGAACAAACAGCAGGACTAAGTCCTGCAAAACTCGAAGAACgtaactttttgaaaaaattacacGAATTCATGAACGAACGACTGACACCAATTCCAAAAGTTATTTGGGTTAGTCTGAAAGAcgTAAATCTACATGCGATATACAACCGAGTACAAGAACTTGGCGGCTACCGTAATTTAACAGATCCTGTAGCATGGGAAAATCTTTTTGTCGGTAGTGCAACACCGCAGTATAGTTCCATCACTAGTAAAAGATATGAACGTGTCTTGCTTCCATTTGAACAGCACGAACGAGGTATTGTCGAAGACCCCGAAGTGGTTGTCGAGAAGCAGATGTCCGAAGTGGTTACTCAACTTGTCGCCGAGAAGCAAGAAGAACCTAAACAAACAGAAGCAGggttaattcaaataattaaagaagAGAAACCGGCTGAGATTGTATTCGAACCACCAAAAGTGGAGGAACCCGAAATCATTGAAGACATAGAAATGGATAATGAAGTGgagaaaattttaatcaaaactgaGGAGATCGAAGACCAAATACCAGATCCGGATGTAAAGGAGGCCGAACTAACCGTCGAGCAAATGAAAGAAATCCAAATGAGAGTTAAATCAAAGGAAAATAATGtcgttacaacaacaacaactaccaCCACTACAACCACAAATCACGTATTAAATGTGCCACCGGTTACTGTAATAGTCGGCGGTGATGCCGGCAAATCGGAGTCGAGCCCATCAACATCGAAAATTCAAATCCAGCAACCGCATACAACTATCACGGTGCATCAGACCACAATACATCCACAAATTTCGCCCAAATCGAATCAAAATCAACCAATTCAAATCActaatcaaattcaaatacagCAGATCACAGTCCAACCAAATAGCGAAGTgaatcaaaccaattttaatatcACCCAGGATAAAATGGGTCAAGAAATCCAAATTAATCCGTCGACAAACGGTGACTACTGTAAAGTATTAAATCGGCCATCCTCATCTGGCGATGAGACGAGCCCATCGAAAAAAGTATCATCATTGCGACATATCCGTGTTAAAAGTAAAGATAATTTGAACGGGTTATCACCGAGCCGAAATCCGGACACCATCGCAACCAATAAAATTGACAGCCACATTCCATTGATTTTAAATCAGAAAATGACTACCATAACGCCGATCCTGGGGAGTAATAGTATTAGTAGTCAAGAGCGGGATAGTAATTTGGGCAAACGTCAAAAGTCGCCTGAAGTTATTGAGCTGCTGGATAGTGATAATGAGAATAGTAATCCAAAACATGTAAAATTGTGCCCGCCAGTTAAAAAACGGAAATTGGAAATTCTGCGGGAAGGTGGATTAGAGGTGACGCCGATTCATCATGGTGCGCCACTTCCAGTTCGGAAACAGGATACACCGCCTAGCTTTGAGGTgacaactaaaaaattaattgtgccTACACCAACCGTACCTAAAGTGGTGCCACGCGTAAATGAGCGACCGAAAACTCCGAAAACCTCGGTGATTCCGAATATGAACGTGACTGCACCACCGAAACCACTTTTTCAATCACACTGTATGTTCCAAAGTAGTAGTAAAATATTTGGTAATCCAAAGGATGTGTTCCAGCCGCAGGCGCTAACAACGAAACCCGTTGTGCCCGCGTTAACGTATATCAAAAAGGAAAACGGCATAATTGATTTGACTTCAGTATCGCCGATCGAGAGAACCCCGTCTATAGAAATAACGAAAATGCCGTTAACGCCACAACCACCTCCTGCTCCGAAAAAGTCAGTTACGCCGCATTCAATTTCGTTACACTTAGGTAGCCAGAATTCGAAGTCGAACTCCATAGTACGTGATTTGCACGTGGGTGAGAAAAATTtacgaacaaaaactaaactcGATCCGCCTCAAATCTCTTTAATACCTCAGCAAAAGTTAACCCATGTGCAACACATTCACAATTCACAGAATCAcaatataaaacgaaattttatggCAGAACCAGAAGTAAAAAAGAAATCGTCCGTCATTCCACCATCCCTCCCAATCACCATACCAAAACCACCCCAGTCCCCATCAATTCCACCACCTTCATTTGCCACAATACCAACAGCGACACCAACCAGTAATCCAACAAATATCATACCTCCACCACCGGCAGCATATTTCCCATCGCTGTCGCAATTACCACCCATGCCATCACAACCCTCCACAAATTCGTCTGCGCATTATTCACCATTCCTGCCATTACTAGATCCAAGGTATTTTCCATCACTGTATCCTAGTCGCGGTATGTTATTTCCACCCGCACCACATCTACCTCCAGAATTTTTACAgtactttacaaaaaatatggcgGCAGCACAGAGTAGTGGCTTATTACCTATAACAAAAAGTTAA
Protein Sequence
MKYEREHNTKRNQEKDEVIAISDKVIIRADDLISWIDADAEWNWGLEAVYTGGGTGGANPIVPNQSNRYLLRNSHLDFTDVEIEKQFEQNRRTNVAVLSYSRYCRYRATLKRLENVTDVQVRNTLIDALSGFSPTCINTRIMFCKDTFDYPELETHDLLCNHLAPKLKGRPRGRRKTTRSENSPGKPRSPSLSDSNESEESECSVRARNRPEVNQRHNHRPARTKTRSECSETTFVAAAPSPKPRKPIKLTVRGTSTKNMTIVKSEEDEEEIDEGSVKEQSDQLEEKKPKIEEPVAAEVKPEVENVPKIRTEAEQTAGLSPAKLEERNFLKKLHEFMNERLTPIPKVIWVSLKDVNLHAIYNRVQELGGYRNLTDPVAWENLFVGSATPQYSSITSKRYERVLLPFEQHERGIVEDPEVVVEKQMSEVVTQLVAEKQEEPKQTEAGLIQIIKEEKPAEIVFEPPKVEEPEIIEDIEMDNEVEKILIKTEEIEDQIPDPDVKEAELTVEQMKEIQMRVKSKENNVVTTTTTTTTTTTNHVLNVPPVTVIVGGDAGKSESSPSTSKIQIQQPHTTITVHQTTIHPQISPKSNQNQPIQITNQIQIQQITVQPNSEVNQTNFNITQDKMGQEIQINPSTNGDYCKVLNRPSSSGDETSPSKKVSSLRHIRVKSKDNLNGLSPSRNPDTIATNKIDSHIPLILNQKMTTITPILGSNSISSQERDSNLGKRQKSPEVIELLDSDNENSNPKHVKLCPPVKKRKLEILREGGLEVTPIHHGAPLPVRKQDTPPSFEVTTKKLIVPTPTVPKVVPRVNERPKTPKTSVIPNMNVTAPPKPLFQSHCMFQSSSKIFGNPKDVFQPQALTTKPVVPALTYIKKENGIIDLTSVSPIERTPSIEITKMPLTPQPPPAPKKSVTPHSISLHLGSQNSKSNSIVRDLHVGEKNLRTKTKLDPPQISLIPQQKLTHVQHIHNSQNHNIKRNFMAEPEVKKKSSVIPPSLPITIPKPPQSPSIPPPSFATIPTATPTSNPTNIIPPPPAAYFPSLSQLPPMPSQPSTNSSAHYSPFLPLLDPRYFPSLYPSRGMLFPPAPHLPPEFLQYFTKNMAAAQSSGLLPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01458130;
90% Identity
iTF_01052969; iTF_01051712;
80% Identity
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