Basic Information

Gene Symbol
ARID5B
Assembly
GCA_932525705.1
Location
CAKOBH010001425.1:232205-235814[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.9e-15 4.6e-11 44.7 0.0 2 89 313 394 312 394 0.90

Sequence Information

Coding Sequence
ATGTGTAGTCACTTTTCCGTGGAAATTTGCTTACCACAGCGTAATACAATGTACATATGCTTGAAAATTATTTATGACGATGTTAGTACATTCCAAATGGATATCGAGTATGTGTTTAAATCGGATATTATCGAATTTAGTAAACGAATTTTGAAAATTGATGTTCTTGGCCCAGTTCCAAAATCGATTTCCGTGCGATATGTATGCATCATGATAGTACCGGAACATAATCGACGAACAAATGTTGCGGTACTAAGCTACTCACGATATTGTCGATATCGTGCCACCCTGAAGCGATTAGAAAATGTTATTGATGTTCAAATTCGAAATACATTGCTTGATGCGGTAAGTGGATTTTCACCGACATGCATTAATACCAGGATTATGTTTTGCAAGGACACGTTTGATTACCCGGAACTGGAGACACACGATTTGTTGTGTAATCATTTGGCGCCAAAATTAAAAGGACGGCCACGGGGTCGAAGGAAGACCACACGATCGGAAAATTCACCTGGTAAACCGCGAAGCCCCTCGCTAAGCGATTCCAATGAGTCGGAAGAATCAGAATGTTCGGTTCGTGCGCGTAATAGACCTGAAGTAAATCAACGGCATAACCATCGTCCGGCTCGAACTAAAACAAAGTCGGAATGTAGTGAGACTACATTTGTAGCGGCTGCACCATCCCCTAAACCGAGAAAACCTATTAAATTGACGGTGCGTGGTACGTCAACGAAAAATATGACAATCGTTAAGTCGGAAGAGGATGAGGAAGAAATTGTGGAAGGTAACGTAAAAGAACAAAGCGACACACTAGAAGACAAAAAACTGAAAATTGAGGAACCCGCCGTCACAGAAGTACAACCTGAAGTAGAAAACGTACCTAAAATACGGACGGAAGCAGAACAAACAGCCGGACTAAGTCCTGCAAAACTCGAAGAACGTAACTTTTTGAAAAAATTACACGAATTCATGAACGAACGACTCACTCCAATTCCAAAAGTTATTTGGGTTAGTCTGAAAGATGTAAATCTTCATGCGATATACAACCGGGTACAAGAACTGGGCGGCTACAGTAATTTAGCAGATCCTGTAGCATGGGAAAATCTTTTTGTCGGTAGTGCAACACCGCAGTATAGTTCGATCACTAGTAAAAGATATGAACGTGTGTTGCTTCCATATGAACAGCACGAGCGAGGCATCGTAGAAGACCCTGAAGTGGTTGTCGAGAAACAGATACCCGAAGTGGCTACCCAACTTGTCGCCGAGAAGCAAGAAGAACCTAAACAAACAGAACCAGAGTTAACTCAAATAATTAAAGAAGAGAAACAGGCTGAGATTGAATTGGAACCACCAAAAGTGGAGGTACCCGAAATCATTGAAGACATTGAAATGGATAATGAAGTGGAGAAAATTTTAATCAAAACTGAGGAGATCGAAGACCAAACACCCGATCCGGATGTAAAGGAGGCCGAACTAACCGTCGAGCAAATGAAAGAAATCCAAATGAAAGTAAAATCAAAGGAAAATAATGTCGTTACAACAACAACAACCACCACCACTACAACCACAAATCATGTATTAAATGTGCCACCGGTTACTGTAATAGTCGGCAGCGAAGCCGGCAAATCGGAATCGAATCCATCAACATCAAAAATTCAAATCCAGCAACCACATACAACTATCACGGTGCATCAGACCACAATACATCCACAAATTTCACCCAAATCGAATCAAAATCAACCAATTCAAATCACTAATCAAATTCAAATACAGCAGATCACAGTCCAACCAAATAGCGAAATGAATCAAACCAATTTTAATATCACCCAGGATAAAATGGGCCAAGAAATCCAAATTACTCCGTCGACGAATGGTGACTACTGTAAAGTATTAAATCGACAATCGCCGTCTGGCGATGAGACGAGTCCATCGAAAAAAGTATCATCGTTGCGACATATTCGCGTTAAAAGTAAAGATAATTTGAACGGGTTATCGCCGAGCCGAAATCCGGACACCATCGCAACCAATAAAATTGACAGCCACATTCCATTGATTTTAAATCAGAAAATGACTACCATAACGCCGATCCTGGGCAGTAATAGTATTAGTAGTCAAGAGCGCGATAGTAATTTGGGCAAACGTCAAAAGTCACCTGAAGTTATTGAGCTGCTGGATAGTGATAATGAGAATAGTAATCCAAAACATGTGAAATTATGTCCGCCAGTTAAGAAACGGAAATTGGAAATTCTGCGGGAAGGTGGACTAGAGGTGACGCCGATTCATCATGGTGCGCCACTTCCAGTTCGGAAACAAGATACGCCGCCTAGCTTCGAGGTGACAACTAAAAAGTTAATTGTGCCTACACCAACCGTACCTAAAGTGGTGCCACGCGTAAATGAGCGATCGAAAACTCCGAAAGCCTCGGTAATTCCGAATATGAACGTGGCTACACCACCGAAACCACTTTTTCAATCACATTGTATGTTCCAAAGTAGTAGTAGAATATTTGGTAATCCAAAGGACGTGTTCCAGCCTCAGGCGCTGACAACAAAACCCGCTGTACCAGCGTTAACGTATATTAAAAAGGAAAATGGCATAATTGATTTGACTTCGGTATCGCCGATCGAGAGAACCCCGTCTATAGAAATAACAAAAATTCCTTCAACGCCACAACCACCACCTGCTCCGAAAAAATCAGTTACGCCGCACTCAATTTCGTTACACTTAGGTAACCCGAATTCCAAGTCAAACTCCATAGTTCGTGATTTGCACGCGGGTGAGAAAAATTTGCGAACAAAAACTAAAATCGAGCCACCTCAAATTCCTCCACAAATCTCTTTAATACCTCAGCAAAAGTTAACCCATGTGCAACACATTCATAATTCACAGAATCATAATATTAAACGAAATTTTATGGCCGAACCAGAAGTGAAAAGGAAATCGGCCGTCATTCCACCATCCCTCCCAATCACCATACCAAAACCATCCCAATCCCCATCAATTCCATCACCTTCATTTGCGCCAATACCAACATCGACGCCATCCAATAATCCAACAAATATCATACCTCCACCACCGGCAGCATATTTCCCATCGCTGTCCCAATTACCACCCATGCCATCACAAACCTCAACAAATCCATCGCATTATTCACCATTCCTGCCATTACTCGATCCAATGTATTTCCCATCGCTGTATCCTAGTCGCGGCATGTTATTTCCACCCGCACCACATCTACCTCCAGAATTTTTACAGTACTTTACAAAAAATATGGCGGCAGCACAGAGTAGTGGCTTACCTATAACAAAAAGTTAA
Protein Sequence
MCSHFSVEICLPQRNTMYICLKIIYDDVSTFQMDIEYVFKSDIIEFSKRILKIDVLGPVPKSISVRYVCIMIVPEHNRRTNVAVLSYSRYCRYRATLKRLENVIDVQIRNTLLDAVSGFSPTCINTRIMFCKDTFDYPELETHDLLCNHLAPKLKGRPRGRRKTTRSENSPGKPRSPSLSDSNESEESECSVRARNRPEVNQRHNHRPARTKTKSECSETTFVAAAPSPKPRKPIKLTVRGTSTKNMTIVKSEEDEEEIVEGNVKEQSDTLEDKKLKIEEPAVTEVQPEVENVPKIRTEAEQTAGLSPAKLEERNFLKKLHEFMNERLTPIPKVIWVSLKDVNLHAIYNRVQELGGYSNLADPVAWENLFVGSATPQYSSITSKRYERVLLPYEQHERGIVEDPEVVVEKQIPEVATQLVAEKQEEPKQTEPELTQIIKEEKQAEIELEPPKVEVPEIIEDIEMDNEVEKILIKTEEIEDQTPDPDVKEAELTVEQMKEIQMKVKSKENNVVTTTTTTTTTTTNHVLNVPPVTVIVGSEAGKSESNPSTSKIQIQQPHTTITVHQTTIHPQISPKSNQNQPIQITNQIQIQQITVQPNSEMNQTNFNITQDKMGQEIQITPSTNGDYCKVLNRQSPSGDETSPSKKVSSLRHIRVKSKDNLNGLSPSRNPDTIATNKIDSHIPLILNQKMTTITPILGSNSISSQERDSNLGKRQKSPEVIELLDSDNENSNPKHVKLCPPVKKRKLEILREGGLEVTPIHHGAPLPVRKQDTPPSFEVTTKKLIVPTPTVPKVVPRVNERSKTPKASVIPNMNVATPPKPLFQSHCMFQSSSRIFGNPKDVFQPQALTTKPAVPALTYIKKENGIIDLTSVSPIERTPSIEITKIPSTPQPPPAPKKSVTPHSISLHLGNPNSKSNSIVRDLHAGEKNLRTKTKIEPPQIPPQISLIPQQKLTHVQHIHNSQNHNIKRNFMAEPEVKRKSAVIPPSLPITIPKPSQSPSIPSPSFAPIPTSTPSNNPTNIIPPPPAAYFPSLSQLPPMPSQTSTNPSHYSPFLPLLDPMYFPSLYPSRGMLFPPAPHLPPEFLQYFTKNMAAAQSSGLPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01458130;
90% Identity
iTF_01054107;
80% Identity
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