Basic Information

Insect: Nephrotoma flavescens
Gene Symbol: RREB1
Assembly: GCA_932525705.1
Location: CAKOBH010001696.1:173093-178725[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0011 0.2 13.9 2.1 1 23 118 140 118 140 0.97

2 14 0.00055 0.099 14.9 5.8 1 23 148 170 148 170 0.99

3 14 4.9 8.8e+02 2.4 0.7 1 23 292 316 292 316 0.82

4 14 0.019 3.4 10.0 4.2 2 22 322 342 322 342 0.94

5 14 1.3 2.3e+02 4.2 0.3 1 19 387 405 387 408 0.77

6 14 0.028 5 9.5 0.1 1 23 544 566 544 566 0.97

7 14 3.7e-05 0.0067 18.5 0.9 1 23 575 597 575 597 0.99

8 14 0.00096 0.17 14.1 2.0 1 23 603 626 603 626 0.97

9 14 0.0011 0.2 13.9 2.1 1 23 965 988 965 988 0.95

10 14 2.4e-05 0.0043 19.1 0.4 2 23 1312 1333 1311 1333 0.98

11 14 0.17 30 7.0 6.3 1 23 1339 1362 1339 1362 0.97

12 14 3.2 5.8e+02 3.0 5.8 1 23 1440 1463 1440 1463 0.95

13 14 0.0097 1.8 10.9 0.5 3 23 1519 1539 1517 1539 0.96

14 14 0.0052 0.94 11.8 5.1 1 23 1545 1567 1545 1567 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0011	0.2	13.9	2.1	1	23	118	140	118	140	0.97
2	14	0.00055	0.099	14.9	5.8	1	23	148	170	148	170	0.99
3	14	4.9	8.8e+02	2.4	0.7	1	23	292	316	292	316	0.82
4	14	0.019	3.4	10.0	4.2	2	22	322	342	322	342	0.94
5	14	1.3	2.3e+02	4.2	0.3	1	19	387	405	387	408	0.77
6	14	0.028	5	9.5	0.1	1	23	544	566	544	566	0.97
7	14	3.7e-05	0.0067	18.5	0.9	1	23	575	597	575	597	0.99
8	14	0.00096	0.17	14.1	2.0	1	23	603	626	603	626	0.97
9	14	0.0011	0.2	13.9	2.1	1	23	965	988	965	988	0.95
10	14	2.4e-05	0.0043	19.1	0.4	2	23	1312	1333	1311	1333	0.98
11	14	0.17	30	7.0	6.3	1	23	1339	1362	1339	1362	0.97
12	14	3.2	5.8e+02	3.0	5.8	1	23	1440	1463	1440	1463	0.95
13	14	0.0097	1.8	10.9	0.5	3	23	1519	1539	1517	1539	0.96
14	14	0.0052	0.94	11.8	5.1	1	23	1545	1567	1545	1567	0.99

Sequence Information

Coding Sequence: ATGGACCGTCGCCTATCAACCAATTCCGAATCATCAATCGAACCGATGGACATAAGTGTTTCGAATAAAACCACCAGCTCAGACGGAAATAATACATCGAGTGCAATGGTAATAAGTAAAATAACCGAATCGAATCATAGCGATACGGATCATGGTGGCATTGAATCGGAGGAAAACGATGAAAATATTGTGCGACGCGAAAATCTTCGTTTACACAATAGCCATATTGATACGAAAATGTTACGGAAAAAATTTCGCCTTATGAATAATAATAACAATAATAGTAATTGTAATAATAACACCGCGACCGATAAAAATCTCAGTATTGAATTGCATGAAAATTTGGAAAATTTTCAATGTCATATTTGCTCAAAACATTTAACTTCATCGATTGCACTGGTGCGCCACCTCCAAGCACATACCCTAGATTCTGAAAGCCCATATAAATGTAATTTATGTCATATTTCATTCACGACCCTGGCTAATATGCATCGACATACAAAAAGTCATCAGCTcgataatgacaagaataataataataataataatgatgatgaggacgatgaagattatcttagtaacgataatgatgagtatgaacgtggtgtctcgtccgatgtttcgtcaggtaacgaaagccgcgacagtgttaatgataatatacgtaataataataataataataataacaataataacaataatactaataataattattcgattggtaaacgaaaaatatcgaatgacgcccatgacgatttaataagcctgaagcgtaaaaattacaataataataaccttattaataaaaatTTTATAAACCAAACAAGTCAAATGCTGGTGGAAGCGCAACAACACCAACAACAAAAATTTTGTTGTCCCGTCTGCGATCGTAACGATTTTATTAGCATGCTCACGCTAGAAAATCACATGGATAAAGAGCACCCTAGTATTCAAGCACGTTGCCGTCACTGTGACATTGTTTTCAAAAGTCATAAAGCATTAAATGCCCACCGTTGCACAAAATCGACAAACCAAAGTATAACTCAGGGATTTAAAGATTTAACGTTTATCGATTTTTCTAGCGAGAAATTTCCGATAATTGCAAAATCCGTATGTGAGCAAACAATTCGAACGCCAATAACATCGCAAAAATATGAATGTCCAAAATGCTATCGGGCGTTTCCGTGTTCGAGTGCGGTCGATATTCATGTACGGGAATGCGGTGGGGCGAATGATTCAGCAATTGTTCAAGATTTTTCGATGCGTACAAGTAAACGCACCGACAGCAGTGACATCTCCGACGATGATGAATGCAAGCGTGATGACTTTTTTGCTAATCTAGACCTACAAAATAAAACATCGAATACATTTAATACATCGAACAATAGTTCACCGCGATCGACTGTTTCGTCTGATATTATGAGAACACCCTCTCTACATCACTCAATTGACTCTAAAGATTTGGCTGATATTCAATCGATAATTAATGTAACGTCGTCCGGAGGATTATTACGACATTTGGACAAACCGTTAAAAGATCATTTAGGCCAGCCGAAAGAGATTGAGGAAGAGGCACAAGACGTCTTTACCGCTGAATTTCGTAAAATGAAATTGCGCGGAGAATTTCCTTGTAAATTGTGCACAGCAATTTTTCCAAATTTACGCGCTCTAAAAGGCCATAACCGGGTACATTTATCGGCGGCCGGTGCTGGACCGTATCGATGCAACATGTGCCCGTACTCAATACATGATAAAGCGGCTTTAATACGCCATATGAGAACACATAATGGCGATCGCCCATATGAATGTGCAGTTTGTAATTACGCGTTTACAACGAAAGCAAATTGTGAACGGCATTTACGTAATCGTCATGCTAAGACGACGCGAGAAGAAGTTAAACGTGCTATTATCTATCATCCGTCCGAGGATTCGTCGGCTGACGAACACCATCATAGCAAAAAAATGACAATGTTTAGCTCGCCTGATTTTAATGAAGACGAGGACCGGATTCCTAAAGATCGTAGCACTCCTGTCTCATCGAGACTTCAAGATTTATTATTGCCTGACAATCATCACCAACGACTGGCGGCATCGCTTTCACCGTCGCCATTAAAAATACAAGTAAAAAGTTTGGAGAAATTAATTCATCCAGAAATCGTGAAAAGTGAGGTGGAAGATGATATTGAGGAGAAGAAAGTGATTGAAGTAAATAATGATGACACAAATCGATCAGAAGATGAAGAAGAAGAAGAGGAGGAAGCTAATGAAGAAACAAAGCCGATTGATCTCTCAATGGACGCGCTAGACTTAAGCAAAAAATCTAAATTCGATGAAAATAAATCATTGAATTTGCTCAACAACAATAATAACGATGAGCTATCATTCTTCGAAAAGAATAAGCAGCTGTTTATGGCACAACAACAATTTTTAAACGAAACCCTTCCAAAAATCGACCCCTCGCACTACCTTCAATTATCTCACTTATACCGAAATTTTATGTTTCCACCACCTGGTTTTCCTCCATTTTTAATGCAAAATCCGTTATTGCAACCACCAAATCTCGGTGAAATGCAAGATATGATGCGCGGCCAGATGTCTGGAGGAAATTTGATATTTAACCAACAAACATCTTCATCGCCCACGCCACCAGCAATTTCAATCAAATCACAACCACATGATGATTCTCCGTCCAAAAGTAGTAGTGTGACTGAATCGCACAAGTACAGTCCAATCACTACACCGACTAATAGCAACAATAATGCGCTACAAAACAATAGTATCCAGGCACAAAATAATCAAATGTCGAACGGGCCTGTCAAAATGGTTATTAAAAATGGTGTTTTGATGCCAAAACAGAAACAACGAAGATATCGCACCGAACGTCCATTTGCATGTGAACATTGTAGTGCAAGATTTACGCTACGGTCAAATATGGAACGGCATATTAAACAGCAACATCCACAGTTTTGGGCACAACGACAGCGAAGTGGCCATAACCTGCTTCGCCGTGGTAGTGGACCTCCCCCACCACCTTCTCCTCAACAACAACAACAACAACAGCAGCAGCAACAGCAGCAATCACAATCGCAACCATCTCCACAACAATCCATGAACCACATGATGCCACAAAATGTACAGCAATTACCAAATCAACCGAATTTTACATCGATATCCGATCAAGTAAAATATGCTATTCTCGCTCAACAACTCAAATATAATAAAGAAAGTAGTAATAAATTGGGGATGCCATCATCGCTGGTGCAATCTCTAAATAATAACAGCCACATGCTTCCGAATAATAATAATAACAACAACAATAATAATTCGATGTATGAAAATCAAAATAATCAAACTATTAACAATAACGACGAGGAAGATGAACCTCAATTAGTTATTGACGAAGACTCACAACCAGAAGACTTATCCAAATTGGAATCACCAAAGAATGCTGTCACACCAAATAATGATTTACACCAGAACAATGTAATTGAGGCGAAAAAAATTGCCGATAATATATTGGAACAAGCCAAAAAAGCGTCATCGAGTATGAACGCCACCACTGCTGCAATTCCATCGAATACCAATATAAATCCGGAAACTGCTAAAGATTTTGATTTAAAAATTTCACCAAATTTAATTGCCAAATCAGAAAGTGTACCAATAAACTATAATTTATATCAGGGCAAAGATAATCATCGTGAAGAGGGTGATTTGGCATCCGTGTCCCGATTAGTGGATAACGCGTTCGGTAATTTTTTTGGAAATAACGAAATTAATACCCCAATGGAGCATAGCGATGAAGATGGCTTAGTAGCATCGGGTAGTGCGTCCGAAAGTAATACTTCGGGGCCAGAAGATCACACGTCTGCCATACCGATTGAACCACAAAAGAAAAAATCTGCTTATAGTTTAGCGCCAAATCGTGTTAAATGTCCATACTGTCAACGGTCGTTTCCATGGTCTAGCTCCTTGCGGCGACATATCCTAACGCACACCGGACAAAAACCATTTAAATGTTCACACTGTCCTTTGCTATTTACAACAAAATCAAATTGTGATCGCCATTTGCTGCGCAAACACGGTAACGTCGAATCAGCCATGTCAGTCGCTGTGCCAATCGATGAAAATATTCCAGAGCCGATAATAAAAAAAGAACCAAAAGAGTATCCTGAAAATGAACCGAATAAATCACCTAAAATGACTGCACCAATAATTCCGCCAACATTCATTCCAAATTTAGTTTTAAGCTTAAAAACTGAACTCATGAATAGTAGTAACGCATCAAACATTCCAGTTAGTACTGAACTTCCATACAAGTGTCATTTATGTGATGGTTCATTTTCGGAACGAATGCAGTGTTTAGAACATATTCGGCATTCGCATGCGCAAGAGTTTGCATTACTATTGGCCAAAGGTGCGATCGATGCAGAACCAGAAAGTAATACGAGTGCGCAACAGCAACTACAGCATAGCAGCGAGAATAATATGGATGAGGAGAATAAAGATGGAAAGGGGAAATATCCTGATTATGCTAATCGAAAGGTTATTTGTGCATTCTGTGTACGACGATTTTGGTCAACCGAAGATTTAAGACGCCATATGCGAACCCATTCTGGGGAACGTCCATTCCAATGTGACATTTGTCTACGTAAATTTACGTTAAAACACAGTATGTTGCGGCACCAGAAAAAGCATAGTGCGCACAATAACAATCAACAGCAAAATAATAGTGCATCAGACATGTCGGACGAAGAACCGACAACAACAATGATTCCAAATAAATTACTCAACATTCCGGATTTAATACCAAAAGACTTAGCACACACGGCTCAATGGAAGCTGAGCCAATTACAAGCCAAACTATTTGGTCAACATCATAACGAAAGTGCAGGCACAAATAATAACAATCATCATCATCATCAAGCTCCATCGCCACCATCATTCCTTATTTCACCATTTCTACAGCTTCAGCAGCGTTTTGCTAGTTTAGCCCAAGCCGGACTCGATGGCCACTCAAAAGATCACCACGATCAAGATGAATCGGATCTAATCGGAAATCTACTCGGCATAAGCGATCAAGGTATTTTAAATCGGGTTTTGGTATCGTCAGCCGATGAAGCTGCTAAATTATTAGGAGTTGAAAAATAA
Protein Sequence: MDRRLSTNSESSIEPMDISVSNKTTSSDGNNTSSAMVISKITESNHSDTDHGGIESEENDENIVRRENLRLHNSHIDTKMLRKKFRLMNNNNNNSNCNNNTATDKNLSIELHENLENFQCHICSKHLTSSIALVRHLQAHTLDSESPYKCNLCHISFTTLANMHRHTKSHQLDNDKNNNNNNNDDEDDEDYLSNDNDEYERGVSSDVSSGNESRDSVNDNIRNNNNNNNNNNNNNTNNNYSIGKRKISNDAHDDLISLKRKNYNNNNLINKNFINQTSQMLVEAQQHQQQKFCCPVCDRNDFISMLTLENHMDKEHPSIQARCRHCDIVFKSHKALNAHRCTKSTNQSITQGFKDLTFIDFSSEKFPIIAKSVCEQTIRTPITSQKYECPKCYRAFPCSSAVDIHVRECGGANDSAIVQDFSMRTSKRTDSSDISDDDECKRDDFFANLDLQNKTSNTFNTSNNSSPRSTVSSDIMRTPSLHHSIDSKDLADIQSIINVTSSGGLLRHLDKPLKDHLGQPKEIEEEAQDVFTAEFRKMKLRGEFPCKLCTAIFPNLRALKGHNRVHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSADEHHHSKKMTMFSSPDFNEDEDRIPKDRSTPVSSRLQDLLLPDNHHQRLAASLSPSPLKIQVKSLEKLIHPEIVKSEVEDDIEEKKVIEVNNDDTNRSEDEEEEEEEANEETKPIDLSMDALDLSKKSKFDENKSLNLLNNNNNDELSFFEKNKQLFMAQQQFLNETLPKIDPSHYLQLSHLYRNFMFPPPGFPPFLMQNPLLQPPNLGEMQDMMRGQMSGGNLIFNQQTSSSPTPPAISIKSQPHDDSPSKSSSVTESHKYSPITTPTNSNNNALQNNSIQAQNNQMSNGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWAQRQRSGHNLLRRGSGPPPPPSPQQQQQQQQQQQQQSQSQPSPQQSMNHMMPQNVQQLPNQPNFTSISDQVKYAILAQQLKYNKESSNKLGMPSSLVQSLNNNSHMLPNNNNNNNNNNSMYENQNNQTINNNDEEDEPQLVIDEDSQPEDLSKLESPKNAVTPNNDLHQNNVIEAKKIADNILEQAKKASSSMNATTAAIPSNTNINPETAKDFDLKISPNLIAKSESVPINYNLYQGKDNHREEGDLASVSRLVDNAFGNFFGNNEINTPMEHSDEDGLVASGSASESNTSGPEDHTSAIPIEPQKKKSAYSLAPNRVKCPYCQRSFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVAVPIDENIPEPIIKKEPKEYPENEPNKSPKMTAPIIPPTFIPNLVLSLKTELMNSSNASNIPVSTELPYKCHLCDGSFSERMQCLEHIRHSHAQEFALLLAKGAIDAEPESNTSAQQQLQHSSENNMDEENKDGKGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHQKKHSAHNNNQQQNNSASDMSDEEPTTTMIPNKLLNIPDLIPKDLAHTAQWKLSQLQAKLFGQHHNESAGTNNNNHHHHQAPSPPSFLISPFLQLQQRFASLAQAGLDGHSKDHHDQDESDLIGNLLGISDQGILNRVLVSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01455207;
90% Identity: iTF_01054760;
80% Identity: -