Napp067783.1
Basic Information
- Insect
- Nephrotoma appendiculata
- Gene Symbol
- -
- Assembly
- GCA_947310385.1
- Location
- OX371225.1:157263798-157270043[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.2e-12 9.7e-09 36.9 0.0 1 39 423 462 423 466 0.92 2 4 1.1e-12 2.1e-09 39.0 0.1 2 39 478 515 477 518 0.94 3 4 4.2e-17 7.7e-14 53.2 0.0 1 45 532 577 532 577 0.97 4 4 1.9e-18 3.6e-15 57.5 0.1 1 43 584 627 584 628 0.96
Sequence Information
- Coding Sequence
- ATGAATACAAATATGAATATTACAATAAAACAAGAGCCAATTGAAGAGTATTATCATGATGCTGGGCATAGTGTAACAGTAAAACATGAACCAATTGACACTGGATACAACTATGCAATTCAATATGTCACAACAGCGAATGGCGAATTGTATCAGATAAAACAAGAGCCGGCAGAGAGTCTTCTTAAAACTGCGGAACATCTAAAAATTAAAGGTCTCTGTGATATAAGTGAAGAATATCCAGAGCCATGTGTTAAACGGAAATTTAAAAATAGTAATAATAATAATAATCAATCAAATCAAAGGAATTATCATTTAAGTAATAATAATAATTTGAATAGTAGTATCAATAATAATAATAGTAATACTGAAGACATAAATAGCAAATTAAGTAATAGAACAAATGAATCTATAAATAATCAAAGTGGTAATAATTTAGTTAAAGATCATAATGATACATCACAGTCGTCACCTTTAACATTGGAAACACGTAGTAATTTAGGAAGTAGTAGTGATAACCAACGGGATAAAAATATGACGAGTCTCGGAATGGGAATGGGCATGAATGGGTCCTTGATGGGTGTATCGATGCAGTTTTTAGATTTTGCACCTGAACCACCGGCACCATCGGCGACGCCAGTCACTGAGCATATTGAGCTGACTGCAAATCTGCACGACCAGGAGATCAGACGGAAATTTGAAACGCTTCGTTCACTGGATCCGAGTGATAACTTAGATGTGGACCGTATATCACAACATTCAATACATCATTTAACATCGTCGCCGCATCATAGTGAAAATAGCCGGGAGCATTCTCAACCACTAGATACCATTGTCATAAAACAGgatttggatagagattcgacatcacagcaggcccaagaacaacttcagcaacagcagcagcagcaacaacagcagcaacaacagcagcagcaacaacagcagcaacaacagcagcagcagcaacaacaacaacagcagtcagaacagtcacaatctcaatcatcacagcatggaaatcagagtagtcggtctagtaatatggacgtggatcaATCTAGTGGATTGGAACACGAACAATTACATGGCATGATTATTACACCCGAGATTGTGACTATGATGACGCCTTCTCATATGGATATCTATCAATCAGATACAAGTGAGGAAACTAAATTGATTTTACCTAGTGAAATTAAAGTAGAATATACTGAATTAACCTCTCCTACTAATGATCCACGGAATGCAGCTGGACCTAAGACGTGGACCCCAGATGACATGGAATCCGCCCTCGATGCACTACGAACACATCACATGAGTTTATCAAAAGCTTCCATTACATACGGTATACCTCCCACAACATTATGGCAAAGAGCTCATCGTCTCGGTATAGACACCCCAAAAAAAGAAGGACCAAATAAATCTTGGAATGAAGATTCATTAAATAGTGCTCTTGATGCTTTACGAACGGGCCAGATATCAGCGAATAAGGCCTCAAAAGCGTACGGCATACCATCGTCGACGCTCTATAAAATTGCAAGACGTGAAGGAATTCGACTAGCCGCACCATTTAATGCTGCACCCACAACCTGGACGCAAGAGGATTTAGAGCGTGCTTTAGAGGCAATTCGTAGTGGCCAAGCATCGGTGCAGAAAGCGAGTGTCGAATTCGGTATACCAACTGGAACTTTGTATGGAAGATGTAAAAGGGAAGGCATAGAGTTATCGAGGTCTAATCCTACACCGTGGTCTGAAGATGCTATGATGGAGGCTTTAGAAGCTGTTCGAATTGGACAAATGTCAATAAATCAGGCCGCTATACATTACAATCTTCCATATAGTTCGCTGTACGGCCGATTTAAACGCGGAAAATACGACACAACTTCAGGTGATGGACACATGATTGATACAAGCCCCGAAAATACAtataataacgtgtttcagcaacagtatagtcctgtcatgatagcacatcaaccccagactccacagccacatcaatcccaacagcagcagcagcaacaacaacaacagcagcaacagcagcaacaacaacagcagcaacagcagcagcaacaacaacagcaacaacaacaacagcaacaacaacagcagataccacaattaatagtgcagcaatcacaaaattcgaatagtcaaccggagttatatctaataacaccaaaacaggaacgaagttga
- Protein Sequence
- MNTNMNITIKQEPIEEYYHDAGHSVTVKHEPIDTGYNYAIQYVTTANGELYQIKQEPAESLLKTAEHLKIKGLCDISEEYPEPCVKRKFKNSNNNNNQSNQRNYHLSNNNNLNSSINNNNSNTEDINSKLSNRTNESINNQSGNNLVKDHNDTSQSSPLTLETRSNLGSSSDNQRDKNMTSLGMGMGMNGSLMGVSMQFLDFAPEPPAPSATPVTEHIELTANLHDQEIRRKFETLRSLDPSDNLDVDRISQHSIHHLTSSPHHSENSREHSQPLDTIVIKQDLDRDSTSQQAQEQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSEQSQSQSSQHGNQSSRSSNMDVDQSSGLEHEQLHGMIITPEIVTMMTPSHMDIYQSDTSEETKLILPSEIKVEYTELTSPTNDPRNAAGPKTWTPDDMESALDALRTHHMSLSKASITYGIPPTTLWQRAHRLGIDTPKKEGPNKSWNEDSLNSALDALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQEDLERALEAIRSGQASVQKASVEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDTTSGDGHMIDTSPENTYNNVFQQQYSPVMIAHQPQTPQPHQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQIPQLIVQQSQNSNSQPELYLITPKQERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01455565;
- 90% Identity
- iTF_01455565;
- 80% Identity
- -