Basic Information

Insect: Neoneuromus ignobilis
Gene Symbol: Trerf1
Assembly: GCA_029203775.1
Location: CP092093.1:7237228-7261948[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00011 0.0085 17.3 0.2 2 23 165 186 164 186 0.97

2 6 1.4e-07 1.1e-05 26.4 1.3 1 23 192 214 192 214 0.99

3 6 0.00016 0.013 16.7 2.6 1 23 220 244 220 245 0.95

4 6 0.00086 0.069 14.4 0.8 2 23 491 512 490 512 0.97

5 6 0.0011 0.09 14.1 0.1 1 23 1530 1554 1530 1554 0.98

6 6 0.00013 0.011 17.0 0.8 1 23 1608 1630 1608 1630 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00011	0.0085	17.3	0.2	2	23	165	186	164	186	0.97
2	6	1.4e-07	1.1e-05	26.4	1.3	1	23	192	214	192	214	0.99
3	6	0.00016	0.013	16.7	2.6	1	23	220	244	220	245	0.95
4	6	0.00086	0.069	14.4	0.8	2	23	491	512	490	512	0.97
5	6	0.0011	0.09	14.1	0.1	1	23	1530	1554	1530	1554	0.98
6	6	0.00013	0.011	17.0	0.8	1	23	1608	1630	1608	1630	0.98

Sequence Information

Coding Sequence: ATGTGTACAAGAAGTAAGTTTTTTTCGTTGCCGGAGCACACTGAGTCTCTAGGGCACCTGCGCTACCACCGACCGATAACAACGCGTCTTCGGATAATGGTCGAAGCGGCGTACACATTTTGTATAATGGTTAGGGCAAACGGTGGGCATGGGACAACGGATGATGTTAACGTTGGATACTGTGGTGACGATTCAGGTGGTCCTGGTAGTAGTAGTATCAATGAAACGTCAGCAACGACAGTTCTTGACCTTTTCGATAGTTCGAGCGGTGGTCACGACTTAACTCTTTCACCACAAACATTCACATCATCAGCCGAAGCATTCATTAATGATAACAGTGACAGTCTCGGTGTTCCACAAGATTCTGTCGATAATGtatGCACCACTGAAGAACTTAAGAAATCTGTTTCTGTTACCACGAACGACGTGACAAAACTGACTGTGAAAAGAGCACGTCCGAAAGCTGCATCACCAAATAGACAAGGACCACAACAATGCCAGGTCTGTTCGAAAGTGTTCGGCAATGCGTCGGCCTTAGCAAAACACAAATTGACGCACAGCGACGAACGCAAATACGTATGTTCAATGTGTGGAAAAGCGTTCAAGCGGCAAGACCATCTCAATGGACATATGTTAACCCACCGCAACAAGAAACCGTACGAATGCAAAGCGGACGGTTGCGGCAAATCTTATTGCGACGCACGTTCCTTACGTCGTCATACAGAAAACCACCATAGTGGTGGTGCTGCTGTTAGCGGAGTCGGAAATAATGGAGCTGCTGCTGTTGCAGCACTTGCAGGATCTGGAGGATCCGGTAGTGGAGGTGGTGCATTAATCGGTGCTGCAGCAGTTGTTAGCACTTCTACTTTATCTCCAGCGCAAGgtGCAGCTTCTGGAGATGCTGCATCACCACATGGATCAGCGTCGTCAACATGTATTCAATATGCTCCACCACCTACGAATGGTTCAACAGACTTAAAGAATGGCTCTGAAAATGGCTTAACAGGTACAAAAACTGGTAACAACACGGGTAAAAGTCAATTACAACAATTGCTTGCAAGTGAACCAGCTAGTAAGAATGGTAGCAATACGCCAAACAATGATGGCTTAACAAAACAACAACTCGACCTTATACATCAAATTATGGAACAGACACAAAGGCAATCTCAGCAAATCAGTGCGGCAGCAGCGAGTAATAGCACGTCGAATAAAACATCCGGATCATCGGCTCGAACTTCGTCTACAGCCAAACCGAAACTGTCGAGAACATGGAGTGCACCGGTCCAAACTTCAAGTGGTACCAGTAAATCTGGTGTTGGATCAAACGGATCATCTGCATCTTCTGGAAATTCTGGTCATGTTAGGTCAAGCGGAGTTGCAGTTTCCGCTGGTGGAGTGGCTGGCGCAGGAGCATCGTCGGGAGTTCAAGGTTCCGGATCTCCTGCCGTTGTGGTTACACCGAAACCAGTGGAATGTAATCTGTGTCATcgaaaattcaaaaacatacCAGCTCTCAATGGACACATGCGACTTCATGGAGGCTATTTCAAGAAAGACGCGGAAAACAAGAAATGTGAAAAAAAGGAATCGACCGGTCCACCACTTCAAACAGCAAGCGTGAGCGTTCGTGCATTAATCGAAGAGAAGATCATTAGTAAACGTACAACAAATCCACAAAATATAACAGTGACGTCTTCAACTGCATCTGCACCGACAACACCTACTGCAGATTCAAACAGAACAAACGCCCCGCCTCTTTACCCACTAACTTCGTCTTCGGATACCACAAAAGTTACTTCGTTTGTTGTTCCTGCTCCTCCAAATCACACTGTTACTACATCTACAGAAAAAATACGTCGTCATAGTGACActgaaaaatttacaataccACGAACACCGAATACTTCAGTGTCTTCTACTACGGTAACAGCGCAACAAGAAGCAGAAGCACTCgcggatttaattttaaaacgtgGTGCAAAAGTAGTCAAGAGAACTACATCAGATCCTGGAGGTCAAACTCAACAGCAActtcaaattcaatttcaacAAGCGAGTGATGCATTTGCACTCGCTGGTGTAACGTATCAATCCGATGACGGATCAGGGTATTTTTCACCAAGTCTCCAAGATGATGTTTTTCATCAGGTGCAAGATACTATGTTATTACAAGGCGTTGATGCAACTCAACTTGCTGAAAGTATACAGTTGCAGGCCGCATCACTGCTTCAAGATCAATCGGCTGATCAACAACTGCAAGATATTGCTTCATTGGAAGATTATGCGAGCGTTACAGCAAGTTTGCAAGAAAGTGTAAACAGCCCTTCATATGGAGGACCTCACACGGTCAATCATGAATTACAAGCGGTCTTGGATTCTCCATTACCTGAAAGTTTAGCGGAGTTCAGTGCGTATCATCCTTCTGATGCAACGGCTAACTCTTCATCGACAGCTGATGATAGTGCATCACCACTGCAGAGGTTTGCAGCATCTTCTGTATCACCTAGAACAGGATCGCCTCTGGTACGTCACGATTCACCTGGATTTGCGTATCCTACACCACCTGCGAGTCACGAAGGACAATCTCCTGGTGGTGGATTTAGTGGCGCTCATCTTTTACCAATGTTATCACCGCAGACTGTCGGAGATGGCCAAAACAATAACGCGTTTGCGAGGGCGACTGACTTGGAAGAACCACCTCAGGCATCGAGTCCACTTTCTGCTGCGTTTTATACTTCGACCATGTCAAGTGCAGCTGCTGTGGAAGAAGCTCTCGAAGAAGTTTTGCCCGGAGAAACAATTGCACCGGATGACATGTACCCCAGTTTAACAAACTCTCCACCTCCAGCACCGCAAAGTCCTATGTCAGTTGGTATGACACCTGTTCCTTCACCAAGTGTACCTGCATCTCCAACAATGGTCAACTCTCCTGCACACGTCGCATTTCCTTTATCTTCTCCTCATCATTATGCAGCACTTCAATCACAAATGATGCCAAATTCAGAAGATCCACTTTTATCTAGCAGTCCTAAAGATTTTGCAACCAGAAAACGATTTGAATTCAATGCAGGAAATATCCAATCGTTCCGAATCATATCAACAACAGGAAACGATGCCTCGAACGGAGGCTTAATCGAACTACCTCCTGGAAGTGCTACGGCTTTCAGCGGCATTCTAGTCGATTCAAACGGAGAACTTAAATTCATTCAAGCTGCTCCCGGGACATTTCACAATGCTAAAAATATTGTCGTTACTTCGACAGGTGCACTAAGTCCCTTAGGCACTGCTCCAAATGGTAGCTCTCAAGCACCAACTGTTGTACAAATAGTCGAAGCTGCACCGTCGCAGTTACAACAATCGGTTTCTTCGGCACATGCACTTCGTACTGTGACAGTTTCACCACATCATACACACCATCAACAAAATCAAATACTTCAACCGCATAGAACGCATCATCTTCAGAGGCTCGGTAATAGAGCTGTACAATGTACTGTACCTGGAAAACCAAACGTAACCCCAAGGCCTAAATTACATATTGCTGTTGATAATCTCAAACAAGAAGAAGCAGATGATGTGTTCTTGAGTCCAACGATGATACCTGCAAGTCCAATACGAGCCTCGAGAAAAAGACCACGTTCAGAGCCAACATTAACAGTACCAATCGTACATCAATCACGACTACGTGCTGCTAAAGGGAGACCACCAGGTGCCGCTCCTTATACACCAGCACCGATGTTAAATCCATCGAGACCTGGACCTGGCCTCTATGCACATGCAAAATGGAAAGCAAGTTCTCCATCAGTGTCCGCATCTAACTGTTCAAGAAACACGACATCGTCGACTGGAAGAAAATTCGGAAATTCAAATAGTAATAACAATCCTGAGAGGCGGAATTGTTCAAGTCCAGTTGACAATAGTACACCAGAGAGCGATTCCACGCCGCATATCAATGTAGGATGTCAGTACCAGTGTTCGTATATACCAGATGTAATAATGAATCGAGGATCAAACACGAAAGAAGACAGGGAACCgaattatgaacatttattatGGGATCCTTGTATTACGTCGACTTGTACTGATGCAGAAGTGGAAATGTATCTAGAATTTGCTTGCTGTGCTGCTGTTCCCGGTGGTGGAAGAAATAAAGAATACGCTCTACATTTACTTCATATGTGTAGTGGAAATATACACgaTGCAATGTTGAAATTAATGCAACCGACACCATCGTTGCCTCCTGATCATCCTCTACTCGCATATCAATATTGTGAAAGCGATAAATGGTCAACACAAGAAACAGAAGCGTTCCATAGAGCGTTATTGAAACATAATAAAGATTTCAGTAGCGTTTCTCGAGATATAggaacaaaaaatgtaaaacaatgTGTCCAGTTCTATTATGTATGGAAGAAAGTCTGTTCTGACGAATATCGAAGGATGAGAGGTACTCTTAACACATCTTCAAGAGATACGCCTCCTTTAAGAGATACAACGGATGCTTTCGATATGAAATTGCTTGGGATGGTCGATGCAGAACCACCTTTAGTACAAGCGCCGGTAACGCACACGATGGACTTACCGAGAACGTTTACTTGCGAATATGCTGATTGTTCTGCTAGTTTCAATTCACGTGCTGCACTGAACGGACATATCCGAATCCATGGAGGGACTGTTCGAAGATCACCGACGCCCGGTCCTCAACAACAACAGAATAATATCGGCGGCGTGATGGGAAATTCTGCGATATCTCATCAACAGCATGCTGGTGATATGGCATCTCGACGTCAGTCCCAGCAACATCACCATCAGACAGATGAAGAATTTCCATGTAAAGTTTGTGGGAAAGTGTTCACGAAGATCAAGAGCAGGAGTGCTCACATGAAATCGCACCGGCCACCAGACGCCGAGCCTAAACGTGTTGCAAAAAGCGACGCTCCCTGTAGTAGTCCATACGATGCATCAATGTCACCGGCAACGCCAAACGCTGTACATTCACCATTACTCGGCTCACAGTAA
Protein Sequence: MCTRSKFFSLPEHTESLGHLRYHRPITTRLRIMVEAAYTFCIMVRANGGHGTTDDVNVGYCGDDSGGPGSSSINETSATTVLDLFDSSSGGHDLTLSPQTFTSSAEAFINDNSDSLGVPQDSVDNVCTTEELKKSVSVTTNDVTKLTVKRARPKAASPNRQGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSGGAAVSGVGNNGAAAVAALAGSGGSGSGGGALIGAAAVVSTSTLSPAQGAASGDAASPHGSASSTCIQYAPPPTNGSTDLKNGSENGLTGTKTGNNTGKSQLQQLLASEPASKNGSNTPNNDGLTKQQLDLIHQIMEQTQRQSQQISAAAASNSTSNKTSGSSARTSSTAKPKLSRTWSAPVQTSSGTSKSGVGSNGSSASSGNSGHVRSSGVAVSAGGVAGAGASSGVQGSGSPAVVVTPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKESTGPPLQTASVSVRALIEEKIISKRTTNPQNITVTSSTASAPTTPTADSNRTNAPPLYPLTSSSDTTKVTSFVVPAPPNHTVTTSTEKIRRHSDTEKFTIPRTPNTSVSSTTVTAQQEAEALADLILKRGAKVVKRTTSDPGGQTQQQLQIQFQQASDAFALAGVTYQSDDGSGYFSPSLQDDVFHQVQDTMLLQGVDATQLAESIQLQAASLLQDQSADQQLQDIASLEDYASVTASLQESVNSPSYGGPHTVNHELQAVLDSPLPESLAEFSAYHPSDATANSSSTADDSASPLQRFAASSVSPRTGSPLVRHDSPGFAYPTPPASHEGQSPGGGFSGAHLLPMLSPQTVGDGQNNNAFARATDLEEPPQASSPLSAAFYTSTMSSAAAVEEALEEVLPGETIAPDDMYPSLTNSPPPAPQSPMSVGMTPVPSPSVPASPTMVNSPAHVAFPLSSPHHYAALQSQMMPNSEDPLLSSSPKDFATRKRFEFNAGNIQSFRIISTTGNDASNGGLIELPPGSATAFSGILVDSNGELKFIQAAPGTFHNAKNIVVTSTGALSPLGTAPNGSSQAPTVVQIVEAAPSQLQQSVSSAHALRTVTVSPHHTHHQQNQILQPHRTHHLQRLGNRAVQCTVPGKPNVTPRPKLHIAVDNLKQEEADDVFLSPTMIPASPIRASRKRPRSEPTLTVPIVHQSRLRAAKGRPPGAAPYTPAPMLNPSRPGPGLYAHAKWKASSPSVSASNCSRNTTSSTGRKFGNSNSNNNPERRNCSSPVDNSTPESDSTPHINVGCQYQCSYIPDVIMNRGSNTKEDREPNYEHLLWDPCITSTCTDAEVEMYLEFACCAAVPGGGRNKEYALHLLHMCSGNIHDAMLKLMQPTPSLPPDHPLLAYQYCESDKWSTQETEAFHRALLKHNKDFSSVSRDIGTKNVKQCVQFYYVWKKVCSDEYRRMRGTLNTSSRDTPPLRDTTDAFDMKLLGMVDAEPPLVQAPVTHTMDLPRTFTCEYADCSASFNSRAALNGHIRIHGGTVRRSPTPGPQQQQNNIGGVMGNSAISHQQHAGDMASRRQSQQHHHQTDEEFPCKVCGKVFTKIKSRSAHMKSHRPPDAEPKRVAKSDAPCSSPYDASMSPATPNAVHSPLLGSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01050320;
90% Identity: iTF_01050320;
80% Identity: iTF_01050320;