Basic Information

Gene Symbol
ZFHX3
Assembly
GCA_029203775.1
Location
CP092089.1:36117871-36131087[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 5.1 4.2e+02 2.6 0.2 1 21 111 131 111 134 0.75
2 15 0.0052 0.42 12.0 0.2 1 23 199 222 199 222 0.93
3 15 0.51 41 5.7 1.5 2 22 308 328 308 331 0.90
4 15 0.087 7.1 8.1 1.4 1 23 343 368 343 368 0.93
5 15 0.006 0.49 11.8 1.6 1 23 386 408 386 408 0.97
6 15 0.0035 0.28 12.5 0.5 2 23 415 437 414 437 0.94
7 15 0.00071 0.058 14.7 3.0 1 23 537 561 537 561 0.92
8 15 0.01 0.83 11.1 0.6 1 22 581 602 581 605 0.89
9 15 0.0046 0.38 12.1 0.2 1 23 656 680 656 680 0.93
10 15 0.0029 0.24 12.8 0.1 3 21 750 768 748 769 0.94
11 15 0.56 45 5.6 2.4 2 19 890 907 889 912 0.90
12 15 0.00022 0.018 16.3 2.5 1 23 1520 1542 1520 1542 0.99
13 15 0.00095 0.077 14.3 0.3 1 23 1638 1660 1638 1660 0.98
14 15 0.012 0.96 10.8 0.4 2 23 1808 1830 1807 1830 0.96
15 15 0.084 6.8 8.2 3.0 3 23 2087 2109 2085 2109 0.89

Sequence Information

Coding Sequence
ATGGCATGCTGGCAGGCTGTGTGCTCTACCGTGGACCACGCGCGTCCGTCTCTGTCCGACGCGCGGGCCGAGCTTATAAGCCGTCTCTGGCGCGCGACGCGTTTCCCAAATAGCGCGGCTACACCTAACTGTGAAGTGCTTTACCACCGTATTGTTTCCGATCAAAATCAACATACTCCCGAAGAAAAACATTCACCTGATATCAAAGAAcaacaacaatttaaattagaaactgCATTACGAGAACAACAAGAGCTTTTATCGAATCCTGGCCAAAATGACAATTCACATAATCCTTCGTTAGAATTACAACAGCAACAACCCTCGCAACATATGTGCCCTTATTGTAATTACAGTAGTGGATCTGAAATGAGAATTCAAGCCCATGTGCTTGCGCAACACAGTGCAGGTGCTCAACAATCACATGAATCAACGTCGCCACAACAACAAACATCTCAACCACCGTGTCAACAATCTCAATCTCAACAGCagcagcaacaacaacaacagcagcagcagcaacaaCAGCAACAGCAGCAACAACAACAGCAACAGCAGCAACAACAACCGCAATCGAGTCAATCCCAAACGACATATTTATGTCCTTTATGTCAAGACTCATTTAAAGATCGTGCCAGTTTAGAGAAACATGTAATGCAGATACATTCGGTGAACTCGGAAGGTCTGCAACGGTTATTACTTTTAGTAGATCAGAGCCATTGGTTAAATCAAGTAGCGAGAACCCCTAGTACACCGACGAGCCAAAATAATACTACTATGCATACACCACCTAATCAGATGGTTTCACCTAGTTCAGTTTCATCCAAAGATTCGACCAAAAACGATTTTAGAAACGAAGAAAATTTAGAACAAGATATGATATCGCCGAATAGCGAAGAAGTTACTGAAATTGAAGTGGAAAGATGCAATGCATGTTTgaagaattttagaaatatcgacGAACTGTGCATGCATCAGAACGAAACGGGACACCTCGAAATTAAACAAACTCCGAGTGGACCAGGTTACGTTTGTTGGAAGAAAGGTTGTAGTCAGTTCTTTCCCACTGCACACAGTTTACAAACGCATTTCAAAGAAGTACAtgcaaaaaattcaatatcacAAATGTCAGTATCTGAAAAACATGTGTACAAGTATCGCTGCAATCAGTGTTCGCTCGCATTCAAGACattagaaaaattacaattacattCACAATATCATTTAATCAGAGATGCTACGAAATGCGTCTTGTGTGGAAGAAGTTTTCGATCTGTCGTGGCGTTACACAAACACGTCGAGTCTGTACATTCGGAGTTATCTGACGATGAACTCGTTGCATATAAAAACAGCTTATTAAGTAATCCGTTATTACTGGCGGGTCTACAAGGACATGTTCTTGATCCTACCACgacagatttattaaaaagagaaacaATGCGTGATGAAGTAGCTGAAACACCTATAGAGAATGAAGAGCATAAAGAACAAGTCGAGGATGGGGAAAACTCGGACGATAGTACAACGTATAAAGAACAACAATTTTTCGAGGATTATCTAAACAGTCAAGCATTGGCCGAAGACAATTATGGCGATCCTAATAGAAAATACAAATGCCATAGATGTCGCGTAGCATTCACAAGACAGAGTTACCTGACAGCACATAATAAGACGCTGCTTCATCGAAAAGGTGAAAAATTAAGTTATCCCATGGAGAAATATTTAGACCCTAATAGACCTTATAAGTGTGATGTTTGTAAAGAGAGCTTTACACAAAAGAATATCTTATTAGTGCATTACAACTCCGTGAGCCACTTACATAAATTGAAACGTGCGATGCAAGAAcaacaaaataacaataataatcctGTGTCCCCAGGACAACAAGGGCAGCCGAGCAGCGGCAATCCGGCATTAACGCTGACGCCGAAGAGCACGTCATCAGAAGAGGACGAGAAGAAACGGTACAGGTGTAATATATGCAGAGTTGCGTATACTCAAGGTAGCACGCTCGACATTCACATGCGAAGCGTGCTGCACCAAACGCGCGCAAGTAAACTGCAAGATCTGGCGCTGAGCGGACAGCTCGATCTGTCACGGCCGTTAGTCGAACAACCTACCGAACCCCCTTCCACGGCGAGCCCGCCGGGTGGGGGCGCAATGCTACAACCCTCACAGACACCCCCCGCTCCGCCGTCCCCTACCCCACCGCTGCCGATACCGGCCGCTCCACAAGGGATGATGGCCTGTCAAAAGTGCGGTGCCCTTTTCACGAGCCAAGATCAGTTGAATACGCACCAGCAGATGTACTGTATGTTCGCTGTGTCTGGCGGTGGTGGTGCTGGTGTCGGTGGACCGATGGCGATTTTAAATCAACAATGTGATAATGTGACACCGCCGCCGATCGAGCCGGGTAGCGGCGACGGCGATCTAAACAAATTACCTCGTCGGACCGGCTCTCACATGTACAAACATCTTCTTGAGAGTTTCGGATTCGATCTCGTCATGCAATTCAACGAGAACCATCAACGAAGACAGAGACAGCGCGAAGAAGAGCAACGGGAGCGTGCTGCAAATCGACCGCCGACGCCGATTCCGCAGGAAGTCACGCCCGTCGAAGAAGTAATCCCGGAAACGACCACCAGTCTTCCCGAGGTTAGTAAATCGACGTGTCAACATTGCAATAAGGAATTCTCTAGTGTGTGGGTACTCAAGTCGCATTGTGAGGAAATACATAAAGATTTAGTGCCATTggaatttcttgaaaaatatgcacaacaaattaaaaacgaatacgAAAAGAAAGCGGTTGTCGTGACGGCCGCAACGTCGTCGACACTAAACACCGTACCTAGAGTTTCGACTCCCGGTGTAGGTGCGGCGACTGCGACAACGATGACACCGACACCCACAATTACAGTACCAGATTCTACGCCCGAAAAAGATATCGAGGAATCGAAAGAACTCTTACATACAAAGTTAAATATTCAACAGACACCGCCGGAGGCTACGTCGACGGCACCGTCCACGCCGACGTCGTCGTCGACACCCGCCTCCAGCACTGACTCGATTCCCGCGAATATTCAAGCGATGCTCGCACAGACGATGGCGCAGAACCCGATGGCGTTCGCGCAACAGATGTCCGAGATGCAGGCCGCGTTGAATGTGATGCAATTACAGCAacagtttaattttaatccGATGGTTATGAGCCAGATGATGGGAATGGGGCTGCCGCTAGGGCTAAACGCCCTCGCCGCGATGAATCTTCAGCCACCACTAGTACCGTTGATGATGCCGCCGCCGCCTTACGATCCGATGGGGTTGCAAGCGCAATTCTCCCCACAGGATCCGCAGGCGATGATGGCCAAACAACAAGCAGCCATGTTACAACAGCAACAGCAGCAGGTGGTTGCAAACGCGGCAGCAAATCAAAAAAGAGCGCGGACTCGCATCACTGATGATCAATTGAAAATCTTACGCGCCCATTTCGACATAAACAATTCACCATCCGAAGATCAAATTCACGAGATGGCCTCGCAGAGTGGTTTACCACCGAAAGTAATTAAACACTGGTTCCGAAACACATTGTTCAAAGAAAGACAACGAAATAAAGATAGTCCATACAATTTCAATAATCCGCCGTCGACAACATTAAATTTAGAAGAATATGAAAAGACTGGAGAAGCAAAGGTTATGCCTCTCAACACATCTGGAAGTTCCTCTGACGATACCTCAAAACAACAGACAGACATAAAGACTTGTACGACGGTGACGTCAATCGCGTCGACTGAATACCAACCGGAAAGTCAAATTAAGACCGAACCTAAAGAAGAACAAATAGAAGAGACGATTCAAAAAATTGAGACTGATAAATTACCTGATACGCCTATAGATGAGAAaccgaatatttttaatataccttTGAATCTACAACAATCACAGAGTCCGGTACCATCATTGACCGGTTCGGATAATCAAAACATGCCACTAAACTCGAGACCGAACACACCTAACGCTCTCACGCTCACATCGATAATATCTTCTCAGCTCGGTGACGCTCTAACGACCACAAATCCACCAATTTCTATGTCTGTGACACCAACGATGAACAATCCGTTATCTAGTACCATGTTACCGCCTCCAAAATTGACACCACAGAATTTTGCAAACCCTAACAATGTGCAAAACATGCTTCCGCTTACACCGAACAGAAGTTTAAGTCCAAACCGTGGAGATTTCGGCACAATGGGGAATAGTAATGGAAGTAACAGTTCTGGTGGTTCTACTGGAAAAAGAGCAAACCGCACTAGATTCACGGATTATCAAATCAAAGTCCTCCAAGAATTTTTCGAAAACAACGCTTATCCGAAAGATGACGATCTCGAATATTTATCAAAGTTACTAAGTTTAAGTCCACGAGTCATCGTGGTCTGGTTTCAGAATGCTCGTCAGAAAGCACGAAAAGTATACGAAAATCAGCCAGCCGTTGAACCGGCACCTGGCATACCTGAAGAAGCTGGTGCTAATCGATTTCAAAGAACACCCGGTTTGAATTATCAGTGCAAGAAATGTTTATTGGTATTCCAAAGATATTACGAATTGATACGACATCAGAAAACGCATTGTTATAAAGAAGAAGACGCGAAGCGATCAGCTCAGGCTCAAGCCGCCGCTGCTCAAATAGCAGCTGTTTTGAGTTCAGAAGATTCTAATTCGAGTACAACAATCGAACAATCACAAATTCAGCCGCCGATCGCTCAGAGTCCTCAGATACAGAATATACCATCACAGAGTCCTGTCAATCAGCCGACACAGCCATCGACGCCGACTCCATCCGCATCGAATTACACAACCTCTCCGATCTCCACGCCCACGCCTAACCAATCGACCGACACCAAAGAAGGAACGTTTCAGTGTGATAAATGTAATCTAGTTTTTCCAAGATTCGATCTGTGGCGTGAGCATCAACTAGTCCACATAATGAATCCAAACTTGTTTCCAACTTACCCGCCTGATTCGCCGTTCGGAATTCTTCAACAGCACGCGCAACTCCAACAGTTAAATGCAAATTTAGGCGTGACAGATCTAAGCAATAGTTCTGGAACGTCGCCGATTCCACATCCTCTGATGGGAATGTTGAACAATGCCGTGCAGAAACGTAAATTTGACGAGTACGATAACGAAAGCGACGTGTCAGATCAACCGAAAGACAAACGTTTACGGACGACTATATTACCCGAACAGCTAGATtacttatatcaaaaatatcagaTTGAAAGCAATCCATCGAGGAAAATGCTTGAAAACATCGCCAGGGAGGTCGGTTTGAAGAAACGCGTTGTACAGGTATGGTTTCAAAATACTCGCGCGAGAGAACGTAAAGGTCAATTTAGGGCACATGCGCAGGTCATCAACAAACGGTGTCCGTTCTGTCCGGCACTGTTCAAGGTCAAATCCGCGTTGGAGTCCCATCTAACCACAAAACACGCCGACCAGTGCGCGAAAGGTGACATTAACATCGACGCGCTGCCGGACGAGGAGCTCAGTTTGGAATCGGCACCGAGTTTTACATCTGAGGGCGGAAATAAAAATTTCCAACAAAATCCTAATATAATACCGCCTCTGTTTCCGCCTTTCAATCCCGAAATGGAAAATTCTATAAAGAAGTATTACGAAGAAAGTATGAAGAGATATATAAGCGAGTTACAAGCGCACGCGGCGGCGAGTAACGGCGATAAAAGTGAAATTAAGACTGGTAAAGAAGAAGGCGAAGTCCCTTTAGATCTATCGAAACCGGTCGATTTATCGAGACCGATGAAAGTGAGTATGGATCATGAAAAATCATTCATTGATCCTGGACCATTGACCGATTTGAGTGAACGTTCTTTGTGCGACGAACGTAGTGATTCGATGTCTGAAACAACTGAGTTTTACGACGACGAAAGTAACCCTACATCTCCTGCTAGTTCCACGCAAAGTAACCAACAAAGACAGTTGTCCGGAAATGCCGGAACGAAACGTTTCCGTACGCAGATGTCGTCGATACAAGTGAAAGTGATGAAATCATTGTTCAACGATTACAAGACACCGACGATGGCAGAATGTGAGATGCTGGGTCGCGAGATTGGGCTTCCTAAACGTGTCGTGCAAGTATGGTTTCAAAACGCGCGCGCTAAAGAGAAAAAGAACAAGATAGCGTTACAAAAAGTGCTCGGCGGTCCTGAAAATTCATCCGATACGAAAACACCTGATGATTGCAAGTActgtaatttcaaatattcgCACAAGTACTCGGTACAAGATCACATTTTCACCAAGAGTCACATAGCGAATGTGAAAATGCAACTCGAGAGTCTCAGCAACAAAGATAACAATTCTGGGAATATGAGTGACGGCGGGGAGTTCACTGTACCGCCAGTGCCCGGATCATCTTCGGGCGGCACGGTGAACGCTGACTCGACGACCAACATGCAACAGGCGCAAACGTTAAACAACAATCAACATTTGGCGCAGATGCAGTTGTTACAAATGGCCGGTCTCCAAATGGCTGTTAGTAAAGGTGTCGGCGATTCACAGAAAGGAGACGATAACAGTCCGGAGACACTGTTCCAACAACTGTACGCTTTGGGAGGCGGTCAAGCCGGCGGATTCCCTGGTACAAGTCAGTTCCTGCATCCAGCCATGTTCGGGGCGAACGGTGAGTGA
Protein Sequence
MACWQAVCSTVDHARPSLSDARAELISRLWRATRFPNSAATPNCEVLYHRIVSDQNQHTPEEKHSPDIKEQQQFKLETALREQQELLSNPGQNDNSHNPSLELQQQQPSQHMCPYCNYSSGSEMRIQAHVLAQHSAGAQQSHESTSPQQQTSQPPCQQSQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQSSQSQTTYLCPLCQDSFKDRASLEKHVMQIHSVNSEGLQRLLLLVDQSHWLNQVARTPSTPTSQNNTTMHTPPNQMVSPSSVSSKDSTKNDFRNEENLEQDMISPNSEEVTEIEVERCNACLKNFRNIDELCMHQNETGHLEIKQTPSGPGYVCWKKGCSQFFPTAHSLQTHFKEVHAKNSISQMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHLIRDATKCVLCGRSFRSVVALHKHVESVHSELSDDELVAYKNSLLSNPLLLAGLQGHVLDPTTTDLLKRETMRDEVAETPIENEEHKEQVEDGENSDDSTTYKEQQFFEDYLNSQALAEDNYGDPNRKYKCHRCRVAFTRQSYLTAHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNNPVSPGQQGQPSSGNPALTLTPKSTSSEEDEKKRYRCNICRVAYTQGSTLDIHMRSVLHQTRASKLQDLALSGQLDLSRPLVEQPTEPPSTASPPGGGAMLQPSQTPPAPPSPTPPLPIPAAPQGMMACQKCGALFTSQDQLNTHQQMYCMFAVSGGGGAGVGGPMAILNQQCDNVTPPPIEPGSGDGDLNKLPRRTGSHMYKHLLESFGFDLVMQFNENHQRRQRQREEEQRERAANRPPTPIPQEVTPVEEVIPETTTSLPEVSKSTCQHCNKEFSSVWVLKSHCEEIHKDLVPLEFLEKYAQQIKNEYEKKAVVVTAATSSTLNTVPRVSTPGVGAATATTMTPTPTITVPDSTPEKDIEESKELLHTKLNIQQTPPEATSTAPSTPTSSSTPASSTDSIPANIQAMLAQTMAQNPMAFAQQMSEMQAALNVMQLQQQFNFNPMVMSQMMGMGLPLGLNALAAMNLQPPLVPLMMPPPPYDPMGLQAQFSPQDPQAMMAKQQAAMLQQQQQQVVANAAANQKRARTRITDDQLKILRAHFDINNSPSEDQIHEMASQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVMPLNTSGSSSDDTSKQQTDIKTCTTVTSIASTEYQPESQIKTEPKEEQIEETIQKIETDKLPDTPIDEKPNIFNIPLNLQQSQSPVPSLTGSDNQNMPLNSRPNTPNALTLTSIISSQLGDALTTTNPPISMSVTPTMNNPLSSTMLPPPKLTPQNFANPNNVQNMLPLTPNRSLSPNRGDFGTMGNSNGSNSSGGSTGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLSLSPRVIVVWFQNARQKARKVYENQPAVEPAPGIPEEAGANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCYKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTTIEQSQIQPPIAQSPQIQNIPSQSPVNQPTQPSTPTPSASNYTTSPISTPTPNQSTDTKEGTFQCDKCNLVFPRFDLWREHQLVHIMNPNLFPTYPPDSPFGILQQHAQLQQLNANLGVTDLSNSSGTSPIPHPLMGMLNNAVQKRKFDEYDNESDVSDQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLTTKHADQCAKGDINIDALPDEELSLESAPSFTSEGGNKNFQQNPNIIPPLFPPFNPEMENSIKKYYEESMKRYISELQAHAAASNGDKSEIKTGKEEGEVPLDLSKPVDLSRPMKVSMDHEKSFIDPGPLTDLSERSLCDERSDSMSETTEFYDDESNPTSPASSTQSNQQRQLSGNAGTKRFRTQMSSIQVKVMKSLFNDYKTPTMAECEMLGREIGLPKRVVQVWFQNARAKEKKNKIALQKVLGGPENSSDTKTPDDCKYCNFKYSHKYSVQDHIFTKSHIANVKMQLESLSNKDNNSGNMSDGGEFTVPPVPGSSSGGTVNADSTTNMQQAQTLNNNQHLAQMQLLQMAGLQMAVSKGVGDSQKGDDNSPETLFQQLYALGGGQAGGFPGTSQFLHPAMFGANGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00004927;
90% Identity
iTF_00004927;
80% Identity
iTF_01050208;