Nign020913.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Neoneuromus ignobilis
Gene Symbol
-
Assembly
GCA_029203775.1
Location
CP092094.1:7350155-7360950[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.0082 0.66 11.4 2.0 2 23 142 163 141 163 0.98
2 34 0.0014 0.11 13.8 2.7 2 23 170 192 169 192 0.95
3 34 0.0081 0.65 11.4 4.1 1 23 206 228 206 228 0.97
4 34 1.5e-05 0.0012 20.0 1.2 1 23 289 311 289 311 0.98
5 34 0.00027 0.022 16.0 6.5 3 23 319 339 318 339 0.98
6 34 0.0004 0.033 15.5 1.7 2 23 358 380 357 380 0.96
7 34 0.00034 0.027 15.7 8.4 1 23 444 466 444 466 0.97
8 34 0.0076 0.61 11.5 4.2 1 23 472 495 472 495 0.95
9 34 1.3e-05 0.0011 20.2 1.5 1 23 500 522 500 522 0.98
10 34 5.7e-06 0.00046 21.3 3.6 1 23 535 557 535 557 0.97
11 34 5.7e-07 4.6e-05 24.4 2.1 1 23 564 586 564 586 0.97
12 34 4.3e-06 0.00035 21.7 1.6 3 23 598 618 596 618 0.96
13 34 0.00018 0.014 16.6 4.3 1 23 624 646 624 646 0.99
14 34 2.7e-06 0.00022 22.3 1.8 1 23 652 674 652 674 0.99
15 34 2.1e-07 1.7e-05 25.8 0.5 1 23 680 702 680 702 0.99
16 34 0.001 0.081 14.2 0.0 1 22 708 729 708 732 0.91
17 34 0.2 16 7.0 0.0 5 23 925 943 923 943 0.95
18 34 0.0058 0.47 11.8 3.6 1 20 949 968 949 971 0.95
19 34 8.7e-06 0.0007 20.7 2.1 1 23 977 999 977 999 0.98
20 34 7.2e-05 0.0058 17.8 0.6 1 23 1005 1028 1005 1028 0.95
21 34 0.0012 0.096 14.0 2.6 1 23 1040 1062 1040 1062 0.98
22 34 0.0063 0.51 11.7 1.0 3 21 1071 1089 1069 1090 0.94
23 34 1.7e-06 0.00014 22.9 1.6 1 23 1098 1120 1098 1120 0.96
24 34 0.0027 0.22 12.9 3.7 1 21 1126 1146 1126 1148 0.94
25 34 0.00036 0.029 15.6 1.0 5 23 1158 1176 1154 1176 0.93
26 34 8.5e-07 6.9e-05 23.9 0.2 1 23 1182 1204 1182 1204 0.99
27 34 0.31 25 6.4 0.5 9 23 1291 1305 1289 1305 0.95
28 34 3.5e-05 0.0028 18.8 2.1 1 23 1311 1333 1311 1333 0.97
29 34 1.8e-06 0.00014 22.9 3.1 1 23 1346 1368 1346 1368 0.98
30 34 0.00042 0.034 15.4 0.6 1 23 1374 1396 1374 1396 0.95
31 34 7.3e-06 0.00059 20.9 0.6 1 23 1402 1424 1402 1424 0.98
32 34 2.2e-05 0.0017 19.5 3.1 1 23 1430 1452 1430 1452 0.97
33 34 4.9e-07 4e-05 24.6 0.1 1 23 1458 1480 1458 1480 0.99
34 34 0.0049 0.4 12.0 2.3 1 23 1486 1509 1486 1510 0.95

Sequence Information

Coding Sequence
ATGGAAAAAGTTTGTAGATCATGTATGAACGAAAGAACTGATATGCGATCAGTTTTTGGTGACTTAGAAATTGCAGGACAACAAGCGCAAGTTTCACAAATCCTCATGGCGTGTGCGTCTGTacagATAATAACAGGTGATGGATTACCAGGATCAATTTGTCAGCCTTGTATTCATCAGTTAAGTAATGCATATTCATTTAAACGACAATGTGAGAATTCGGATACAAAGCTACGTCATTATGTAAATTTAGAGTACACTGATATAAAAGAAGAACGAGAATCTGAAACTTTAAATATCGTCGTAAAACCTGACATCAATGTTATGTCAGAAATTATGTTAGAAGATAATTCACCGTATGATGATTCTGATGCAGAAAGTAATAATAAGTCTGAAAAAAACGACAGTATATTAGTTCCAAATCaatgtaaattttgttttaagaaATTAGCATCCAAGCAAGGTTTAAGCATTCACATGAGAAAGCATACAGGACAAAATATGAAGGTGTGTCCAATTTGTCATGCAggttttacaaaaacaaatcattTGAAAAGACATTTGCAACAGGttcatacaaaaaaagaatCAGACAATAATTCTGAAACCAAAACGCATGTTTGTACAgtatgtaatgaaaaatttgataaaattacacATCTTATAAAACATAAACGTCTACATAGATTGTCTAAAAGCAATGAAAAAATAGACactgatgaaaaattaataggGCAAAAGACAGTTAAATcagaaatagaaattaatgcaaatgaaaataatgataatattgatAATGATAAAGATAGTATAcctaataaaaaagatttagatTTTGTTCAGTCAGGAAAAGTGAAAGGAAAATTTGAATGTAAAGAATGTCATAAAATTCTTACTACTCCAAATGGTTTACAGATACATATGCGAAGGCATACAGGTCATAATTTAGTTTTGTGTTgtatatgtaataaatcatttactaaAACAAGTCATCTTAAACGTCATCTTGCTACTCATGGTACTCCTACAGAAGAAGTCCAAACTGAAATTAAACCATCAAAATTAAGTTTACCATGTGAATTTTGTGATCGTAAATTTGTATATCGTAAAAGCTTTGTACATCATATGAGAATTGAACACGGCATCTCAGATGATGAAAATATTCCATTGAGTTCttatattaaaacagaaaaaaaggaGCCTGAAAATGAAGATGAACAAAATGTTAATGTAAAAGGAGAAGTAAAGAGTAATGATGAGGGAGGATCAGATCATGATGAACCATATCATGAGGAAATAGACGAAAAAACGGGTGATAAAAAAAAGGTGTTTGAATGTCATGTATGTCAGCACAAATTTACAAGATCAAATCATTTAACTCGTCATATGACtttacatagaaatattttaacacataaaTGTGATCGATGTGAAAAATCATTCTTAACAGAGGAAcatttacaaaaacatatacaGGAATATCATATTGATCGACCCTATATTTGTACAACATGCAATAAACCATTTACTCGAGGAGAGCATCTTATCCGTCATCTAAAAGTAcatgataaagaaaaaaaagatgATAATACAGTAGTAGAACATAAATGCTCTGTTTGtgataaagtatttataagaagtgATCATTTAGCCAGACATACTAAACTTCATTTGCTCAAAGATAAGAGGCATGTATGTGatgtttgtaataaatcatttaatcgTTTGGACAATTTACGCACTCATCAACGAGTGCATACAGGTCAAAGAGATCCAGTAAGACTACATCTTTGTGTATATTGTGGGAAAGAATTCAATAATTCTAGTAATATGatTGTTCATATGAGAAGACACACTGGAGAACGGCCATATAAATGTAATGTATGTGGAAAAGGATTTCCACGTTCTCATGATCTTAAATGTCATGAACGAACACATTCTGGTGAACGACCTTATCAGTGTTCATTATGTGGGAAgtcatttaataaaagtaataaattgGTTCGTCATACCCGTGTTCATACTGGTGAAAGGCcttatgtttgtaatttatgtGGTCGAGCTTTTACTCAGTCAAATGATTTGACATTGCATATGAGACGGCACACAGGGTCTAGACCATATGCTTGTGGAGTTTGTCCTGCACGGTTTATTCAATCTGGTCAGCTTAAAGCGCATAGAAGAGCTCAAGAACATTGGGTAGAACAAGAAGTTCAGTTCAGAGGTAACAGAGTGGAGCCTGTACATATAGAAGGATTTGTTGAAACACCCATTAAGCACAGAAATCGTGTGAAACCAATAAAACAAGAAGTGAATGCTGTTTCTGAGTCATATGTAGAAAATCCATTTTTAGCTGTAAGTGCTAATGGCAGTGCTGCAGCAGTTGTTCAGTCTTTTGTTAGAAGTAGTAGGGACGATGTTGATGTAAAACCAACAGTTGAAGAAGCAGAAGAATACCAAAGTACAAGTACATCATTTCAACAAACCAGTATTGTGACTTCTGTTGCTGAACCTCAAGTAAGTATATTTGAACAAGATAGTGATTTTGAAAAAGATgactgttttgaaaataaagaatcAATTACCTCTATAGAAGGAACAAAAGAAGATTCAAATGTAAATGTAAGTAATATCAAAGCAGAAACtgattttgaagaaaaatgtgatttatCAGACACTTTACGAATTCCTTCTGATACTGATAGTAAAGATGAAAATGAAGTTAATTCCGATGTACCTCAAAAACGTAAACGTGGTAGACCAAGAAAAGGTGAATGTGAAAGGTTATTTTCAACTCCGTTAGATTTAGAAATACATCAACTGAAACACGCTGGAGTACAGAAATTTTCTTGCAAAGTTTgcttaaaagaatttattcgAGGTGATCATTTAAAACGTCATATGATTTGTCATTTAGAACACAAACCATACAGTTGTGATATATGTACAAAATCATTTGCAAGAAAAGATCACATGATTCGTCATGTGAAACttcattcatttgaaaaaaaatatgaatgtgaTGTTTGTAAACGAATGTTTTCTAGagaagaattattaaataagcaTAAAGCTGTCAAACATGGTATTGGAGAAAAGATAATTCctgaaaagaaatttaaatgtgAAACTTGTGGAAAATTTTTTACTACAGAAAAATATCGTGATACTCATATGAAAGCACataaagaaaaagataaaatgGTGCATTGTAAAACTTGTGATAGACATTTTGAGTCAAGAGCTGAATTAGttaatcatttgaaattaacaaaTGATTGCTCTAGACGTTTTTTATGTTCAGAATGTGGTCaaagatttacaaaaaaagattatttacaaGTGCATATGCGAAGACATCGTGGAGAGAAACCTTTTAAGTGTAAATATTGTGAGAAAGGTTTTCCACGAACAACTGATTTAAAAGCTCATGAAAAGTGTCATACTGgagaaaaaaatcacttatgtATAGTATGTGGAAAAGGATTTGGCAGAGCTTATAAATTGACGTTACATATGCGTACACATACCGGTGAAAAACCCTATCAGTGCACTTATTGCGATGCAGCATTTGCACAGAGTAACGATTTAAAAGCACATATTCGTAGACATACTGGTGAACGTTATCACTGTGATCTATGCACTGATGCTTTTTTAATGGGCTATATGCTCACTCAACATAAACGAAATGTTCATGGTATTGAAGTAGCAACTTCACAGCGTCCTGTTGCCCGACTTCAGCCATCTGTTTATAACATATCAGTTGTTAAACCAGAAATGTTAAGAGCTTCAACTACTACAGCAACATTAGATCCACGTCCTATACCAGGATTTTCATTTTCACAAACCTTAAATTTGTTGAATCATCCAATGTTTTCAAGATCTGATAGTCTTGCTGAACATTTGAGAAGACATAAAGGTATTAAACCTCATCAATGCAATGAATGTACTAAAAGATTTGTTAGTTTAAGTTCCCTTAAAGCTCATAAATTAATTCACGAACGTGATAGTGGAAAGACAACACATGAAAAAAGACATCAATGTTCTTATTGTCAGAAAAGTTTTGTTTCAAATTCTAGTCTTATTATTCATACCAGAACTCATACAAAAgaaAAACCTTTTTTATGTACATCATGTGGTAAAAAATTTGCAACACAAGGTGGCCTTGATTTACACACACGGCGACATACTGGTGAGCGACCATATAAGTGTGAATTTTGTGGACATGGTTTTGCAGAAAGTAGTAATTTACGAGTTCATATTCGTGGTCATACAGGAGACAAACCACATATGTGTAGCTTATGTGGAAAAAGATTTACaagaatgtttttattacaattacacATTCGTACCCATACTGgtgAAAAACCATATAAGTGCACCGAATGCCCTAAAGCATTTGCTCAACAAGGTGATTTAGCTGCTCATAAGCGAACACATTCAGGGCATAGACcacatgtatgtgtttattgtGGTCAAGGTTTTATTAAAAGTGGTGGAATGAAAAAACATCTTCAATCAAAGCATCattcagaaataaatatcaataaaactaAATCTGAAGATGagtaa
Protein Sequence
MEKVCRSCMNERTDMRSVFGDLEIAGQQAQVSQILMACASVQIITGDGLPGSICQPCIHQLSNAYSFKRQCENSDTKLRHYVNLEYTDIKEERESETLNIVVKPDINVMSEIMLEDNSPYDDSDAESNNKSEKNDSILVPNQCKFCFKKLASKQGLSIHMRKHTGQNMKVCPICHAGFTKTNHLKRHLQQVHTKKESDNNSETKTHVCTVCNEKFDKITHLIKHKRLHRLSKSNEKIDTDEKLIGQKTVKSEIEINANENNDNIDNDKDSIPNKKDLDFVQSGKVKGKFECKECHKILTTPNGLQIHMRRHTGHNLVLCCICNKSFTKTSHLKRHLATHGTPTEEVQTEIKPSKLSLPCEFCDRKFVYRKSFVHHMRIEHGISDDENIPLSSYIKTEKKEPENEDEQNVNVKGEVKSNDEGGSDHDEPYHEEIDEKTGDKKKVFECHVCQHKFTRSNHLTRHMTLHRNILTHKCDRCEKSFLTEEHLQKHIQEYHIDRPYICTTCNKPFTRGEHLIRHLKVHDKEKKDDNTVVEHKCSVCDKVFIRSDHLARHTKLHLLKDKRHVCDVCNKSFNRLDNLRTHQRVHTGQRDPVRLHLCVYCGKEFNNSSNMIVHMRRHTGERPYKCNVCGKGFPRSHDLKCHERTHSGERPYQCSLCGKSFNKSNKLVRHTRVHTGERPYVCNLCGRAFTQSNDLTLHMRRHTGSRPYACGVCPARFIQSGQLKAHRRAQEHWVEQEVQFRGNRVEPVHIEGFVETPIKHRNRVKPIKQEVNAVSESYVENPFLAVSANGSAAAVVQSFVRSSRDDVDVKPTVEEAEEYQSTSTSFQQTSIVTSVAEPQVSIFEQDSDFEKDDCFENKESITSIEGTKEDSNVNVSNIKAETDFEEKCDLSDTLRIPSDTDSKDENEVNSDVPQKRKRGRPRKGECERLFSTPLDLEIHQLKHAGVQKFSCKVCLKEFIRGDHLKRHMICHLEHKPYSCDICTKSFARKDHMIRHVKLHSFEKKYECDVCKRMFSREELLNKHKAVKHGIGEKIIPEKKFKCETCGKFFTTEKYRDTHMKAHKEKDKMVHCKTCDRHFESRAELVNHLKLTNDCSRRFLCSECGQRFTKKDYLQVHMRRHRGEKPFKCKYCEKGFPRTTDLKAHEKCHTGEKNHLCIVCGKGFGRAYKLTLHMRTHTGEKPYQCTYCDAAFAQSNDLKAHIRRHTGERYHCDLCTDAFLMGYMLTQHKRNVHGIEVATSQRPVARLQPSVYNISVVKPEMLRASTTTATLDPRPIPGFSFSQTLNLLNHPMFSRSDSLAEHLRRHKGIKPHQCNECTKRFVSLSSLKAHKLIHERDSGKTTHEKRHQCSYCQKSFVSNSSLIIHTRTHTKEKPFLCTSCGKKFATQGGLDLHTRRHTGERPYKCEFCGHGFAESSNLRVHIRGHTGDKPHMCSLCGKRFTRMFLLQLHIRTHTGEKPYKCTECPKAFAQQGDLAAHKRTHSGHRPHVCVYCGQGFIKSGGMKKHLQSKHHSEININKTKSEDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00004804;
90% Identity
-
80% Identity
-