Nign006730.1
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- TFIP11
- Assembly
- GCA_029203775.1
- Location
- CP092088.1:60101330-60104659[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-89 7e-85 285.8 15.4 1 275 388 659 388 659 0.97 2 2 0.062 1e+03 -0.1 0.0 242 272 671 701 664 704 0.81
Sequence Information
- Coding Sequence
- atggaCGACGATGAAGTAGAGGCATTTGAAATAACTGATTATGatttagaaaatgaatttaacattAACAGGCCTCGTCGAAGACAAACTAAACATCAACAAATATATGGCATATGGGCCGACGATAGTCCCGATGAAGACGACTCGAGAAATTTTAGACGTAAAGCACCTAAAGACTATTCAGCACCTATTGGATTTATATCGGCCGGTATAcagaaaaagaatgaaaaaaaagaagaaaCGAAAACGTCGGACGATGAAGCCGATGTGAGAATCGTGAACAGTTCTAGTGAATCCGAAGACGAGAGGCCTACGTTCGGTCAGTCGAACAACTCGAAAGATTACAATTCGTTTTCGGATACTACCGGGGACATAGCGGGATTAAGGAAAAGCGGCCGGCCGCAGGTCAACTCGTTGCTTATGAACAAAGGCGTAGGGAATTGGGAAAAACATACGAAAGGTATCGGTGCGAAGTTGCTTTTGCAGATGGGATATCAACCTGGGAAAGGGCTCGGTAAAGATTTACAAGGTATATCAGCACCGGTACAAGCACATTTGAGAAAAGGTAGAGGTGCTATCGGTGCATATGGACCAGAGAAAGCAGCCAGTATAGGAGATCAAAAGgtTGAAGATAAAGATGACACTGGTGGAAAAAAAGAAAGGCAGAATAAGTGGAGAAAAAATGATAACATGCAGAGTAAAAAAACacgatattattataaaagtgttgatGATGTTATAGGAAAGGGGAAACAGCCTGGAATGTATAGAAATACAGAAGCATCTAGCCACTTGAGTAATGTAAAAGTAATTGACATGACTGGTCCTGAACAACGTGTTTTAAGTGGTTATCATGCTTTGAGCGGACCAAAAAAACCACCTGGCGGTGGAGAATTGTACGAGGATATTGTTCATAAACAGTGTGCAAATTTTGTTTTACCTGAATTACAACACAATTTAGATTTGTTAGTAGACATGTGCGAACAGgatATTATTTGGGTAGATAGGAAACAAAGACATTGCTCAGATCGAGTTGTAGGATTAGAACAAGAACAGAAATCTCTATTAGAAATTACTGAAAAAGAAAAAGTTCAAATAGACACGCTACAGAATGTTTTAGATACAGTCCAGCGTATTATGGATCCTTCACATGCTTTATCATTGAGACAAGTAGCAgatgtttttaaagaattacAAGATAAATATTTCGAAGAATATCTGTTACATGATTTAGCAGAATTAGCGCCCGGAATAGTCGGTCCGTTGATCACTTCAGCGTTAGTGAGCTGGTCGCCGTTGGCGACTCCGAATCAATATATTGAAGTATTCGAGCAATGGAAAGAGATTCTCGATCAACCGAAACACCGTGCGACATTGGCATCGAATTCGATAGGTTTAACTCCGTATGGAAATCTCGTTTGGAACACGTGGGTTCCTGTGATAAGAACCGTTGTTTCCACATGGACCCCACGGAACTGTTACCCATTGATCCAACTGCTGGATTTATGGAAGCACGTGGTTCCAAAcgcaataattgaaaatttactcGAACAGACAATTTTACCGCAGATAAATACAGAAGTAGTTCAGTGGAATCCGTTAACGGACACGACGCCTATTCACGTTTGGATATTTCCGTGGATCCCTCTGATGGGACTCAGGATGCAAGAAAGTATATATCCTATCATCGAGGATAAACTCGGTGCAGCGTTAACGAGCTGGCATCCGTCGGATAGATCAGCTAAGCTGATGCTAGAGCCTTGGCAGGAGGCTATGTCGCCTGGCTCGTTCTCTGCATTcttacataaacatattttacctAAACTACAAGTTTGTTTATCAAGTCTGGTAATTAATCCTCATCAACAGCATTTAGTTTCATGGAGTTGGGTAATGGATTGGTCAGATATGTTGAGTATGTCTGCAATGGCATTGTTATTGGAGAAATGTTTTCTGCAACGCTGGCTGCAAACATTAGCCCTCTGGTTGAATCAAGGTCCAGACTATACTCAAGTTACTGAGTGGTATACAGGATGGAAAGGAATGTTTTCTGAACAATTACTATCACAACCAAATATTAAAGaatattttCGAAAAGCACTGGATATGATGAATCGTGCAGTCAGCCAACCATCTGGTCAACAACCTGGTGCTCTTGAAACTGTTTCATACCTCACGAATTTAGAAACTAGCATTCCACCTCCTCCACCTTTAATGAGCACTTCACGAGCTGAGagtTTAGTACAAGCAGTCAGAACAGCTTCCCAAATACCACAAAGTTTTAAAGATCTTGTAGCGAAACGATGTGAAGAACGTGGAATTCTTTTTGTGCCAATAGCTAACAGATTCCGTGAAGCAAAACAAGTGTACAGAATAGGAAGCGGTTCGACACAGTGTTACATCGATAGGAATGTTGTCTTTGCAACAACTAACGGTGTTAATTGGGCACCTACGTCCCTCAATGACTTACTTGATATGGCTTAA
- Protein Sequence
- MDDDEVEAFEITDYDLENEFNINRPRRRQTKHQQIYGIWADDSPDEDDSRNFRRKAPKDYSAPIGFISAGIQKKNEKKEETKTSDDEADVRIVNSSSESEDERPTFGQSNNSKDYNSFSDTTGDIAGLRKSGRPQVNSLLMNKGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVQAHLRKGRGAIGAYGPEKAASIGDQKVEDKDDTGGKKERQNKWRKNDNMQSKKTRYYYKSVDDVIGKGKQPGMYRNTEASSHLSNVKVIDMTGPEQRVLSGYHALSGPKKPPGGGELYEDIVHKQCANFVLPELQHNLDLLVDMCEQDIIWVDRKQRHCSDRVVGLEQEQKSLLEITEKEKVQIDTLQNVLDTVQRIMDPSHALSLRQVADVFKELQDKYFEEYLLHDLAELAPGIVGPLITSALVSWSPLATPNQYIEVFEQWKEILDQPKHRATLASNSIGLTPYGNLVWNTWVPVIRTVVSTWTPRNCYPLIQLLDLWKHVVPNAIIENLLEQTILPQINTEVVQWNPLTDTTPIHVWIFPWIPLMGLRMQESIYPIIEDKLGAALTSWHPSDRSAKLMLEPWQEAMSPGSFSAFLHKHILPKLQVCLSSLVINPHQQHLVSWSWVMDWSDMLSMSAMALLLEKCFLQRWLQTLALWLNQGPDYTQVTEWYTGWKGMFSEQLLSQPNIKEYFRKALDMMNRAVSQPSGQQPGALETVSYLTNLETSIPPPPPLMSTSRAESLVQAVRTASQIPQSFKDLVAKRCEERGILFVPIANRFREAKQVYRIGSGSTQCYIDRNVVFATTNGVNWAPTSLNDLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00004663;
- 90% Identity
- iTF_00004663;
- 80% Identity
- -