Nign021092.1
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- ARID5B
- Assembly
- GCA_029203775.1
- Location
- CP092094.1:10226687-10235731[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-25 5.1e-22 78.9 0.1 2 89 243 328 242 328 0.95
Sequence Information
- Coding Sequence
- ATGGGTGATATGTCGAACCACGCGTTCTGTCAACCAAACAAGCTGCTGAGTAGTTGCGTGTCCTTGAAACTCAAACTACTCCTCGATCATGATCCCGCAAACGAAAACAATATCGAGTACCCTCCTGAGCAGAGTTCTTTCGAACATCTTGCTCGGGTTGGAGAGCAGCGAGATGTGACGGTAGTTCATGGCGAACCGCAACGGCTTGCCAATCTTCGGAATCGCGATTATTTTGCCAAGTTTTCAGTTTCAGGGGAAATGTTTTATCTGAATGATCGATCGCATGATTCTTGGACTAAGGGTGTTGGGGTAATGGTATTGAGTTATCCTCGTTACTGTCGTTATAGAGCTTTAATGAAACGGCTTGAAAACGTTGAAGATAAATGGCTAAAAAGTTCGTTAGTTTCGATGCTCGGCGGCTTTACTTCGCCGTGCCGTAACACGcgagttttattttgtaaagaCACGTTCGATTATCCTGATTTAGAAGGTCACGAATTACTCTGCAATCATCTTGCACCAAAATTAAAAGGTAGACCTCGAGGTAAACGGAAAAAACGAAGCATATCGCCCGGCGGATCAGAATCTAACGAATCTGAATCTTCGTTATCTACCACATCTACCTGTGCAaagACAAGACTGACAACTGTTGGTGGAAGAAACGGGCTTCGATGCAATACTACAACATCTCCTAGAAGAAGTACAAGATCGTCACAGAGCAATGAAGAACGTGAATTTCTTACAAAACTGAATGTTTTTATGAAGTCACATCGAACGCCGATAGGTCGACTTCCTTCGCTGGGATATAAAGAAATCGatctttataaattctattacaaAGTACAGCGATACGGCGGTTATGAAAAAGTCACTACCAATCGTATGTGGAAATCGATATTCGATGAACTGGGCGGTAATCATGGATGTACGAGCGCTGCTACTATAATAAGAAAGCACTATGAAAAATTTCTACTTTCTTTCGAGAGAAATGCTAAAACTCAAGAACGAAAATCTCAGTCCGATCGTCGTCGTTTAAAAAGTAAACCTTCGACCAGTTGTAGCGATGCTGAAAATAACGAAAGTTCAAGTGGACACAGTACGCCGGTCTCTTGTCATACGCACAATGTTTCTACTTCAAGTTCTTCGTCTGTAGATAGCAAGATTTTCACAGTACCTCATAAAACTAAATCCGACGGTAAACCATCTTCACTTCGAAGTGTTCGTGTCAAACCTGATAGAATACGTGAATCTTTAAATCCAGCCAAAATCGGCTTGAGTGCTACAATATCATCGGTACCGGATCCTCAAACTCATAAAAATTGTGTTGTTACTCCTATAACACCCTCTGTGACATTAACAGACATAACCTTACCAGTACCTGTTACACCTGTAAGTGACAGTGAATTCACACCCGAAGCGACTACTCCGGATAAAGCGCCGGCTTTACAGAACACTCCTTATGAAAAAGCGGAAATCGAAAAGATTTCAGAAATATCAACGGAAAAAGATACACAGCAGAACTGTCAGAGTCCAAAATCTATATTGAACAGTTACAAAAAAGACATTTCACTCGACAGTTcgtgtaaaaaaattgaaattcgaCCAAAAACCGACTCACCTGAAATAATCGATTTAGAGGCAGAAGATGATCCTGTCATCGAAACTAATATTCTTCCAATAATGCTTCCTGAAGTAAAGAAGAGGAAACtagatatattaaaagaagGCGGTTTAGAAGTGACAGCGGTATCTTCGGCATCGAACAATGCTCTTTTGCAGAATGATAGTAGACCTTCTGTAATTCATCAGTTTAGTGTTCCTGACGAGCCGATTAAAAAAGCATCGACGACACTCACGCCTAGCACAGAACGGTTATCGGGTCCGGCAAGATTTCAGCATAAAATTTTGCACACGCCCGACTTGTTTGCACAGTCTTGTAAAACGTCGGATCATCGATCGCCTTTCAAATCGACGTCTCGTAACACCGCTTTTGCCGATGGTCACGTACCTCCAAAAGTCATTCAGTCACGTTCCATTTACAGCCGTTCGCAAACGACAGTCTACGGAAATCCTAAAGATCCCTTCATGCCGCCACCGCTTACTACACAATTGCCGAGGCATATAATTCAGAATGTCTCGAAGTCGACCAGCAGTGAAGTGTtagatttaacaataaaaacctCACAAAAACCCGTAGTGGAAATAATGCGAGTACCTAATGTGCCTTTGCCTATGTCTCACGCATcctttaaagaaaaatctatgaAGTCGTTCAATAAAAATCACGTTTCCGGTTTACAAATGATCGATGGAAGAGTAGTCGGATCGAATTTAGAAATCACTCTCGTCGAAAACCCCAAATCGACGCAGAAAGTTTCTTTCACGCCTCAGAAAATACCCGTCCCTTCTCATCACAAACATCCTCAGAAACGATCCTCGTCCGGAAAATTCATGTCGAACAGATCGCACGACGTCAGAACAGAAAACGGAAAGTCTTCGAATCGCTCGTTGACGATACCGACGTATCAGTCGATCGTCGACAGAAACGGGTCTACCTCCGCGGGCGCCGATCTCGTGATTCCGACGGTTCCCCATTTGTCTAATCGCAATAGCATTCCCAAAACGGATGATCTCGCGAGGCTAAAACAGGAAACTTTACATTCGAACGCAAACTCATTCCATCCTGCCGGGTCTCCGGTATTTCCCGGTTTCATGCCCCATCTTCCTAATGTGTCGTCGAAAAATCCATATTTGCAAATGTTAGATCCTATTTACTATACCGCTCTGGCTCAAGAATTGTATTCGAATTCAATGCCAATGACAGCGACCTCGGTGTTTCCTCATGCGACAAGTGAACAGTTGCAgctatataaacaattaatgacaAACAGTAACCGGTTGAGATTTCAGTTTCCGAATCTGTTACCAGAAACGTCGGCTTCGATCACTTCTGTCGGCCAAACGCCTAGCAACAAatctaaaaactaa
- Protein Sequence
- MGDMSNHAFCQPNKLLSSCVSLKLKLLLDHDPANENNIEYPPEQSSFEHLARVGEQRDVTVVHGEPQRLANLRNRDYFAKFSVSGEMFYLNDRSHDSWTKGVGVMVLSYPRYCRYRALMKRLENVEDKWLKSSLVSMLGGFTSPCRNTRVLFCKDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSISPGGSESNESESSLSTTSTCAKTRLTTVGGRNGLRCNTTTSPRRSTRSSQSNEEREFLTKLNVFMKSHRTPIGRLPSLGYKEIDLYKFYYKVQRYGGYEKVTTNRMWKSIFDELGGNHGCTSAATIIRKHYEKFLLSFERNAKTQERKSQSDRRRLKSKPSTSCSDAENNESSSGHSTPVSCHTHNVSTSSSSSVDSKIFTVPHKTKSDGKPSSLRSVRVKPDRIRESLNPAKIGLSATISSVPDPQTHKNCVVTPITPSVTLTDITLPVPVTPVSDSEFTPEATTPDKAPALQNTPYEKAEIEKISEISTEKDTQQNCQSPKSILNSYKKDISLDSSCKKIEIRPKTDSPEIIDLEAEDDPVIETNILPIMLPEVKKRKLDILKEGGLEVTAVSSASNNALLQNDSRPSVIHQFSVPDEPIKKASTTLTPSTERLSGPARFQHKILHTPDLFAQSCKTSDHRSPFKSTSRNTAFADGHVPPKVIQSRSIYSRSQTTVYGNPKDPFMPPPLTTQLPRHIIQNVSKSTSSEVLDLTIKTSQKPVVEIMRVPNVPLPMSHASFKEKSMKSFNKNHVSGLQMIDGRVVGSNLEITLVENPKSTQKVSFTPQKIPVPSHHKHPQKRSSSGKFMSNRSHDVRTENGKSSNRSLTIPTYQSIVDRNGSTSAGADLVIPTVPHLSNRNSIPKTDDLARLKQETLHSNANSFHPAGSPVFPGFMPHLPNVSSKNPYLQMLDPIYYTALAQELYSNSMPMTATSVFPHATSEQLQLYKQLMTNSNRLRFQFPNLLPETSASITSVGQTPSNKSKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00004459;
- 90% Identity
- iTF_00004459;
- 80% Identity
- -