Ncya024398.1
Basic Information
- Insect
- Neoitamus cyanurus
- Gene Symbol
- LST
- Assembly
- GCA_947538895.1
- Location
- OX384541.1:31683621-31689891[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00017 2.9 9.0 0.0 33 56 225 248 217 249 0.89 2 3 8.6e-05 1.4 10.0 0.1 31 56 551 576 537 577 0.87 3 3 0.0092 1.5e+02 3.5 0.0 31 56 880 905 866 906 0.84
Sequence Information
- Coding Sequence
- ATGTTTGACATTAAACCGTTTACGGGGGAGTCCGTTTGGACGCGGATGACTGAATTGGCTGAGATTACGCCCAAGGAAGCCACCAAAATTGGAGATATTGAAATCGCTCCTCGTTCTATTGTTATGTCGTCAATGACCCATGAAGTTCTAGACAAAATCCATAACTTTAAAGTGAGGGACGACGATGTGTGGATTACGACTTATCCGAAGTGTGGTACAACTTGGATGCAGGAGATGTGCTGGCTGATTCTCAACAACTGCAACTTCGAGGCTTCACAGCAAACTGATTTGGAAATAAGGTCGCCGTACCTGGAGTACAATGCAATTATTCCAGAATTTCCACTCGACACCTTGGAGCTTTTGGAAAAAATGGAGTCCCCAAGAGTGATTAAGACCCATCTCCCGATATCATTACTGCCGAAAGAGTTATGGACGAAAAATCCAAGAATAATTCATGTATGCCGCGATCCCCGCGATGCAGCAGTATCTTATTATCACCTATTGTCGGCACAAGGAGGGGATTTCGACCTCTCAGATTTCTTGGACTCGTACATCACTCAGCACATGTACGGATCTTTTTGGGGTCACACCCTCGAATTTTGGCAACTCAGGCATAATCCGAACGTTCTCACGTTGGCATTTGAAGATATTAAAAAGGATTTGCCTGCAGTGCTTGAAGTGGTGTGTAGTTTCTTAAAAGCGAACGTAACTCCAGAGCAGATGACTCAGCTGGAAGAGAACTTGTCGTTTGAGAGCATGCGAAAAAACAAATCGTTGAACCATGACCTCGAAAGTAAGCATTTGGCATCACTTCTGAATGCGCCGCCACCGACTTTTAAGTTTATGCGGAAAGGACAAGTTGGCAGTCATAAGACTGAGTTCCCCCCACAGTACATCAAAATTTTTGACGAGTGGGTGCACAGCAATTTAAAAAATTCTGATTTTGTGAGGATTCTTCAGTCGACAGTTAAAGTCCGTGCGAAGATGTTTGATATTGAACCGTTTACGGGAGAGTCTATTTGGGCGCGGAACACAGCGTTGGTTGAGATTACGCCCAAGGAAGCTACCAAAATTGGAGATATCGAAATTGCTCCCCGTCCAATTCTACTGCCGCCAATGACCCATGAAGTTCTAGACAAAATCCATAACTTTAAAGTGAGGGAAGACGATGTGTGGATTACGAATTATCCGAGATGTGGTACAACTTGGACGCAGGAGATGTGCTGGCTGATTCTCAACAACTGCGACTTCGCGGCTTCACAGCAAACAGTTTTGGAACTAAGGTCGCCATACCTCGAATACAGCTCAGTTACTCCAAAAGCTCCCCTCGACACCTTGGAACTGTTAGAAAAAATGGAGTCCCCAAGAGTGATTAAGACCCATCTCCCGATAGGATCACTGCCGAAGGAGTTATGGACGAAAAATCCAAGAATTATCCATGTTTTCCGCGATCCCCGCGATGCAGCAGTATCTTTATACCATTTAAGGGTGGCGAAAGTAGGGCATTTGGAACTCTCGGATTTCTTGGACTCGTACATCACTCACCCTATGTGCGGATCCTTTTGGGGTCACACCCTCGAACTGTGGAGACTCAGGCATAACCCGAACGTTCTCACGTTGGCATTTGAAGATATGAAAAAGGATTTGCGTTCAGTGCTTGAAGTGGTGTGTAGTTTCTTAAAAGCGAACGTAACTCCAGAGCAGATGACTCAGCTAGAAGAGAACTTGTCGTTTGAGAGCATGCGAAAAAACAAATCGTTGGACCATGACCTCGAAAGAAATCATTTGGCATCACTTAGTAATGTGCCGCCACCCAATTTTAACTTCATACGGAAAGGACAAGTTGGCAGTCATAAGACTGAGTTCCCTCCACAGTACATCAAAATATTTGACGAGTGGGTGCACAGCAATTTGCAAAATTCTGATTTTGTGAGCAAGATTCTTCAGTCGGCAGTTAACGTCCGTGCAAAAATGTTTGATATTGAACCGTTTACGGGAGAGTCTATTTGGGCGCGGCACACAGCGTTGGTTGAGATTACGCCCAAGGAAGCTACCAAAATTGGAGATATCGAAATTGCTCCCCGTCCAATTCTAATGCCGCCAATGACCCATGAAGTTCTAGACAAAATCCATAACTTTAAAGTGAGGGAGGACGATGTGTGGATTACGAATTATCCGAGATGTGGTACAACTTGGATGCAGGAGATGTGCTGGCTGATTCTCAACAACTGCGACTTCGCGGCTTCACAGCAAACAGTTTTGGAAATAAGGTCGCCGTACTTCGAATACAGCTCAGTTACTCCAAAAGCTCCCCTCGACATCTTGGAACTGTTGGAGAAAATGAAGTCCCCAAGAGTGATTAAGACCCATCTCCCGATAGGATTACTGCCGAAGGAGTTATGGACGAAAAATCCAAGAATAATTCATGTTTTCCGCGATCCCCGCGATGCAGCAGTATCTTTATACCATTTAAGGGTGGGGAAATTAGGGGAATTCGAACTTTCAGATTTCTTGGACTCGTACATCACTCACCCTATGCGCGGATCCTTTTGGGGTCACACCCTCGAATTGTGGAAACTCAGGCATAACCCGAACGTTCTGACGTTGGCGTTTGAAGATATTAAAGAGGATTTGCGTTCAGTGCTTGAAGTGGTGTCTAGTTTCTTAAAAGCGAACGTAACTCCAGCGCAGATGACGCAGCTAGAAGAGAACTTGTCGTTTGAAAGCATGCAAAAAAACAAATCGTTGAGCCATGACCTCGAACATAAGCATATCGCATCACTTATGAATGCGCCGCCACCCAATTTTAACTTCATACGGAAAGGACAAGTTGGCAGTCATAAGACTGAGTTCCCTCCACAGTACATCAAAATATTTGACGAGTGGGTGCACAGCAATTTGCAAAATTCTGATTTTGTGAGGTACCGCTAA
- Protein Sequence
- MFDIKPFTGESVWTRMTELAEITPKEATKIGDIEIAPRSIVMSSMTHEVLDKIHNFKVRDDDVWITTYPKCGTTWMQEMCWLILNNCNFEASQQTDLEIRSPYLEYNAIIPEFPLDTLELLEKMESPRVIKTHLPISLLPKELWTKNPRIIHVCRDPRDAAVSYYHLLSAQGGDFDLSDFLDSYITQHMYGSFWGHTLEFWQLRHNPNVLTLAFEDIKKDLPAVLEVVCSFLKANVTPEQMTQLEENLSFESMRKNKSLNHDLESKHLASLLNAPPPTFKFMRKGQVGSHKTEFPPQYIKIFDEWVHSNLKNSDFVRILQSTVKVRAKMFDIEPFTGESIWARNTALVEITPKEATKIGDIEIAPRPILLPPMTHEVLDKIHNFKVREDDVWITNYPRCGTTWTQEMCWLILNNCDFAASQQTVLELRSPYLEYSSVTPKAPLDTLELLEKMESPRVIKTHLPIGSLPKELWTKNPRIIHVFRDPRDAAVSLYHLRVAKVGHLELSDFLDSYITHPMCGSFWGHTLELWRLRHNPNVLTLAFEDMKKDLRSVLEVVCSFLKANVTPEQMTQLEENLSFESMRKNKSLDHDLERNHLASLSNVPPPNFNFIRKGQVGSHKTEFPPQYIKIFDEWVHSNLQNSDFVSKILQSAVNVRAKMFDIEPFTGESIWARHTALVEITPKEATKIGDIEIAPRPILMPPMTHEVLDKIHNFKVREDDVWITNYPRCGTTWMQEMCWLILNNCDFAASQQTVLEIRSPYFEYSSVTPKAPLDILELLEKMKSPRVIKTHLPIGLLPKELWTKNPRIIHVFRDPRDAAVSLYHLRVGKLGEFELSDFLDSYITHPMRGSFWGHTLELWKLRHNPNVLTLAFEDIKEDLRSVLEVVSSFLKANVTPAQMTQLEENLSFESMQKNKSLSHDLEHKHIASLMNAPPPNFNFIRKGQVGSHKTEFPPQYIKIFDEWVHSNLQNSDFVRYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -