Basic Information

Insect: Neoitamus cyanurus
Gene Symbol: rfx7.L
Assembly: GCA_947538895.1
Location: OX384545.1:28234639-28240173[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-32 2.7e-28 99.2 0.1 3 78 176 251 174 252 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-32	2.7e-28	99.2	0.1	3	78	176	251	174	252	0.97

Sequence Information

Coding Sequence: ATGTCAGAACAAAATGTGCCACAGCAATGGAAACGTGAACCATGCGATACCTCAGGAGGCACAAGTGGTAGCAGCCAATTCTTCAACAAGACGGACGTCGTATCTACTCGAGTAGTGGAGCAGTCATCATCGTCATCATCATCATTTTCAATACCTCGTACAACAAATCTACCTGGCGATCTCTACCAGAACGCTGCTGCTGCCGCCGCGAATTCAACCCAGTTGCAGCATCATGATCTGCAGAAATTCTCAAATATCACAAAATTTAATACGCTCGCTAAAATCAGTGGCTTTGAGGGTGTCGCACAAATGCCTGAAGATGAGAAGCTCCGAAAAGTGCAGCAAATCGTCGAGGCTGGAGTCGGCGATCATGCTAAGCAACAAATATTGCAAATTTTGGATAAGGTATCCCTACTCAAACCTCCAGAGAGATTATTATTGTACCTGCGGATGCCTGGTGGTACGCCTGAGACAGATCCACTACGGCAGCCACAAAACCCCTTGGGAACGCGGTCAGAGATTAACCACACCATAAATTGGGTGCGATCGCATTTGGAGCACGATCCCAAAGTATCCATACCAAAACAGGATGTGTACAACGATTACATATCTTACTGTGAACGTGTCGAAATTAAGCCTCTGTCCACAGCTGATTTTGGAAAAGTTATGAAGCAGGTGTTTCCCGAAATAAGACCGCGGCGGCTAGGGACTAGGGGCCATTCCAGATATTGTTATGCCGCGATGAGAAAGTCAACGAAGCTCGATCCACCACGTCTGCCAGATTTAGGGACGAATGCCAATTTGGGAGATTTTAACGGTGTTATGGATGAGGACTCTTGGAAGATAATCAAAATGTGGGCAGAGGGTTTGTTGAACGCTACCTTTGATAGTTTGAAGGATTTGGCGACTCACATTACACGTCATCATCTGAATACTCCCGCAAGCAACAGTTCGAGGCTTCTATTACAAAAGAAGTTGCTACAGAGAGAGGCGCGGGAGAAGAGGAAATACGCTGATTCTAGTCCACTTAAGAAGCGAAGGAAGAAAAAGCGTCGAAGTTCATCATCATCGGAGTCAGCGGCACAGCAGAATTCGATGCTATCGGATGGTGCTTTAATGAGCGTTAAGAAAGAGGTATTGGATCCAGTCCAGCAACAACAGACGACACAGATGCAGCCGCCGGTAACGATTCTACAATCGCCGCAGCAAATGCTGCCCATAAATCTGGTCACGGAGCAAGATACAGGCAATCTTCGCAAAATCCAAGGTACAAATTTAGGCTGTGATAATACGCTAGTCGTTGGTTGTACGACCAAAAATCTAGTTGCACCGGCAATGCCATCGGTTTGTGCTGCTGTAATGAAAGACAACTCATCTGCTCTCACCCCGATGCCGGAAAATCTGACCAAATCGGCTTTGGTTAAGGAGGAAATTGCTGATGAGTACAATTCGAATGTCCTGTGCAAGAAAGTTAGACAAGCACAGCAGGCAAAAGGCTTGTGGAACTCATCACAAGTGCTGGGCACTAATCCAGCTGTACAGCAGAATCTACTGATGCCATCAGTACAACATCCGGCAATTGTGGGCTATGCTAAGCCAAACGATGGAATGATGCGACCTCCTCTCCAGGTGGATATACATCCAGACAGTCATGGGATGCATTCTAAATATGAGTCTGCTGGTGCAATGGGGCCGGGCCCTGGCAGACCAGAATCCCAGATTTTAATCAGGGCCAGGAAACTAAAGTACCTTCAAGCTAAACTTGAGAGTGTTCGAGAAGAACAGGCTGCGTCTGAGGTTGATCCGGAAAAAGATGTTCTTCCTGAAAACTTGGGGATTCCAAGAGAGCGAGTTATTAGCATCTGCAATATGGACAAGCATGAGTTGGACGATTATTTAAATGGGGGAGACAACTCTCAGGATCAGGAGGCCGAATTAATGCAATATTTCCAGTCAGAAGAGAATGGGGTCAAGGCTAGTGGGAACAATGCTCCAGGTTCTTCAGTTGAGACTGCAACGAATGCTCTACCCATGGTAGAGCATTCCAAGCAGTATAATACAAGCAAGGATGAAAAGAAGGCAGCCGCTGCGGCTAATAAGGATCATGATGAAATCACGCAACTGCGGTACTACCTCCATCAAAATTTACAGAACACAAAGGACGCCGAGGGCTCGGTCAATACGACATCACCTTTAGAGCAATCAAACTCTTACTCAGGTATCTACACGGCAGGATCCGCCTCCGCCTCTTTAGCGATGATGTCGCAAAGGCATATGTCCGAGGATATGAGATGCTGCAATCTTAACCACGAAGGTCCACATCCGTGTGGGGTTAACAATAACTCTGCTTTGCGTGGTTTCAGGCGTAAAGTAAATCTTAATTCTCGGTCTGGTGTGCCCAATAGTCCGAACGCCAGAAGGAAGAACTTTAGCTTCGTGCCAATATCGCCGAATGCGAATACGCCCAACAATTCCATTGACTACAGTCCGTTCGTCAGTCCTCGGTCTACGCCGGTGGTAAGAAAGCCTCCGCTACACAAGCAACAGTCGCTTCCATTGGCCGACCACAATATGACTGATCCCATGATAGGTGCGAGTCGGGTACCCTTCTCCAAGTCGGGCAACATGAACACTATAAGTGCCTCGGCTCCACCCAGTCCATCGCTTGTTCAGCAAAGATTTCACTTTGCTCCAACTACCTCAGTCACTGTGGTCTCTCACTCGAGCGTGTGCAGCGATCCACAGTTCAATCATTTTCAGTCTGTTGCGCTCCAGTGCCGCAACCAAAATCCGGCCGACTGCAGTGTGGTAGAAGGCATGGCAGAATCTCGTTCTCAAAGTGTTCCACTTCATTGCCGGAGTCCACTCTTCAGCCAATCAACTAATTTTGCAGGCTTCTCGTCTGCGTGCAGCTCAGTAGCTCAAACTCCTGTACCTCCAGAGTTCGCTGATTTTAGCGACCCCTCAACCATTTTAGACATTTTTTCAGACACCAGCCAGCATAATCCAATTAAATTAGAGTCGAATGAAGTGGGTTCGTCCCTTCTGGATGTTGACATTGCCTCCAGTGAATCTGCCATGGGAATGAGCGACTTGTTGCATGGCGATTTTGACCCGAAAATTAACACCATCTCAAGGTCTGTTCCATCAACTCCACTGCCTATGCTTAATTATAAAGCCATGGGCGCCAATTCCGGGAATGCTGACTTAAGCAGGATGAGCAAAATGTATGATATGTCCAAGTCAGTGCCGACCACTCCGATTGCTATGAACGTTAGACCGTTTAGGTATAGTCCAGAGTTCAATCGAGATTACTTGATTAATGGTAATACTGTGGAATCTGGACTGCCGTACTATAACCAGCAGGCCACCTCATCTACCTCTGTCGGTGCTCCAGTCGAGAAGTCTTCTGTGTCAACGGCGGCACCGCTTTCTGAAGGAATCGACGATCTCTCTAACTTTGGTGATGTTACCGAGTCCATCATTGGTGCGGACCTACTGGGCAACCTCTAG
Protein Sequence: MSEQNVPQQWKREPCDTSGGTSGSSQFFNKTDVVSTRVVEQSSSSSSSFSIPRTTNLPGDLYQNAAAAAANSTQLQHHDLQKFSNITKFNTLAKISGFEGVAQMPEDEKLRKVQQIVEAGVGDHAKQQILQILDKVSLLKPPERLLLYLRMPGGTPETDPLRQPQNPLGTRSEINHTINWVRSHLEHDPKVSIPKQDVYNDYISYCERVEIKPLSTADFGKVMKQVFPEIRPRRLGTRGHSRYCYAAMRKSTKLDPPRLPDLGTNANLGDFNGVMDEDSWKIIKMWAEGLLNATFDSLKDLATHITRHHLNTPASNSSRLLLQKKLLQREAREKRKYADSSPLKKRRKKKRRSSSSSESAAQQNSMLSDGALMSVKKEVLDPVQQQQTTQMQPPVTILQSPQQMLPINLVTEQDTGNLRKIQGTNLGCDNTLVVGCTTKNLVAPAMPSVCAAVMKDNSSALTPMPENLTKSALVKEEIADEYNSNVLCKKVRQAQQAKGLWNSSQVLGTNPAVQQNLLMPSVQHPAIVGYAKPNDGMMRPPLQVDIHPDSHGMHSKYESAGAMGPGPGRPESQILIRARKLKYLQAKLESVREEQAASEVDPEKDVLPENLGIPRERVISICNMDKHELDDYLNGGDNSQDQEAELMQYFQSEENGVKASGNNAPGSSVETATNALPMVEHSKQYNTSKDEKKAAAAANKDHDEITQLRYYLHQNLQNTKDAEGSVNTTSPLEQSNSYSGIYTAGSASASLAMMSQRHMSEDMRCCNLNHEGPHPCGVNNNSALRGFRRKVNLNSRSGVPNSPNARRKNFSFVPISPNANTPNNSIDYSPFVSPRSTPVVRKPPLHKQQSLPLADHNMTDPMIGASRVPFSKSGNMNTISASAPPSPSLVQQRFHFAPTTSVTVVSHSSVCSDPQFNHFQSVALQCRNQNPADCSVVEGMAESRSQSVPLHCRSPLFSQSTNFAGFSSACSSVAQTPVPPEFADFSDPSTILDIFSDTSQHNPIKLESNEVGSSLLDVDIASSESAMGMSDLLHGDFDPKINTISRSVPSTPLPMLNYKAMGANSGNADLSRMSKMYDMSKSVPTTPIAMNVRPFRYSPEFNRDYLINGNTVESGLPYYNQQATSSTSVGAPVEKSSVSTAAPLSEGIDDLSNFGDVTESIIGADLLGNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01256147;
90% Identity: iTF_00717450; iTF_00937002; iTF_01460880; iTF_01183554; iTF_00627964;
80% Identity: -