Npin009760.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- Gata5
- Assembly
- GCA_021155775.2
- Location
- CM037742.1:1118790-1124283[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-16 2e-12 47.3 2.5 1 35 512 545 512 546 0.97 2 2 2.3e-18 1.1e-14 54.6 7.4 1 35 571 604 571 605 0.97
Sequence Information
- Coding Sequence
- ATGAAGGAGCCCCTGATCAGTAACCAGCAGGAGTCGAAGATAGACTGGGACGGAAATCGGACTGAGGGAAATTCGCCTCGGATGTCGCAACAACCCCCGGATGACCAGAACCAGGAGCCGAACCCCCGCAGCGTGATAACCGCCAGGCGGCATGTCAGAACCATAACCACAGCGGGACACATAACCGAGGGGACGGTCGGAGACCAGGAATCCGAATCCCCGATACCGAGTCCCGTTGGCGCCGGGTTGCAGCAGGCCATGCCGGTCGGCACCGCCCAGGAACAACACGAGCAACATCAGCACCAGCAGCCGCGATACCAGCAGGATGATCAGCACCAGCAACACTTCATCGAGGTATCGCGAGGCTCAAGTCCCGGTGATCCTCGTGACCAGCACCACGTTCCGACGTACGCCACCAACGGTCAGGACAACACCGATTCACAGGAGAGCGGAGAATCCACCATCACAATCGCTGTCAGCAAAGAACCACCGAGATACGGGACGCCGAGACCCGAGAGAACAGAAGTGAGGTATATGTACGGAAACCAGGAACAGGAAGTGCGTAGGGAGGAGCTGGTGGTGCATGGCGatcaccagcagcagcaggcaCACCAGAGGTACAGTCCTCAGGAGAGTGAGTTGCGGGCGAGGTACCAAGGATCGCCGCTCGGTCACCGCGAGGATTACGCAGCCTCGCCAATGGTTTCGCAACCCGGGGGAACTATCCAGATATCGGCGTCACCGGCAGCTCCGTATTCCCCACCGATCGATGGGATCAGAGCAGctcagcaacagcagcagcaacagcaacagcagcaacaacaacagcaacagcaacagcagcagcagctcgTAGTCGCGGGATACTCGGATCCCGGTAGCGTGAATGTCAAGTACGAGGCTGAGACCGTCGCAGCGACAGAGAGCATCAAAGGCTCCAGTACTTACACGACCCTGGAGACCGTTGCTCTAGCCCCAGCGCAGCCGGTTCAGTACGCGCAGTACATCTCAGCAAGCGAATCGTTTCAACAGACAGTTCCAAGTTACAGCTACTCGAAACCGGGTGATTTCTACCTGAGCTTTCCAGCCACAAGTCAAGCTGGAGGCCGAGCGGCAGAGGTCGACTCACCGAGCAGTGTCTACATAAAAAGTGACCCGACTCTCACCTCATCCTCGCTTCTAAGCGGTGGACGACTCCCGCCGCTGCATTACGAGCAGCCTGGATCTCCCGGGTCCCAGGTCACCCTCCATGGAAGCGGGACGGCTACCTACCAGTACGTCAAATCCAACGGGGACCAGTACTGGTCTACGGGGGGATCGACACCACCATCGACCCTTGAGTTCGTCCAAGGGTACGGGGGCGGCGTCGCGGCCATTTCGGCCAACGACGCCGCCAACATGCAGCTCTACCCTGGCGGCGGGTACAACGGTGTCGGTAACGGGAACGGACCCCAGTCACCATGGACCACTCTGCCGCCCGGTGCGGGCGACGACTCCTTCGAAGGCCCCATTATGACCGCCGAACTTAAGGAGTGCGTCAATTGCGCCGCCAACATGACACCTCTGTGGCGGAGAGACGGGACTGGACACTATCTCTGCAACGCCTGCGGCCTCTACAGCAAAATCAACGGTGTAAACAGACCTCCGATTAGATGCGGGAAGCCCAAACAGCCCGTCGCACCGACCGGGGGTCGCAGGACGGGAGTTCAATGCGCCAACTGTCACACCAGCAACACGACGCTCTGGAGACGCAACAACAACGGCGAGCCGGTTTGCAACGCGTGCGGACTTTACTACAAGCTGCACAACGTGAACCGACCTCTGAGCATGAAGAAGGAGGGAATCCAGACACGCAAGAGGAAGCCGAAGAACCCAGCAAACCTGCCGGGAAGTCTGGCTGGATCGAGTGGAATGCACAAGACCGAGCTTAAAGCGAGCTTACTCGTGGAATCGAAACTGCAGCTGAACATGTACCCCAACGGCGGTTCGGGGGGTGGATCGGGTGGCGGTGACGAGCACTATTTACCCGTCGGTGCCCTCACCACTGCCCAGCTGAACCACGCGCATTCACCCCTAGCGCTGCCCTCCGCTGCCGCCCTTAATCGTCAGACCACCCTCTCGGTGCCCCCGCTGGAACCGATCAATAGTCGATCGGCGGCCGATCTAACGTCGGTAATAACCTCAACAACAGCCGCTCATACCGACAGAAACTGA
- Protein Sequence
- MKEPLISNQQESKIDWDGNRTEGNSPRMSQQPPDDQNQEPNPRSVITARRHVRTITTAGHITEGTVGDQESESPIPSPVGAGLQQAMPVGTAQEQHEQHQHQQPRYQQDDQHQQHFIEVSRGSSPGDPRDQHHVPTYATNGQDNTDSQESGESTITIAVSKEPPRYGTPRPERTEVRYMYGNQEQEVRREELVVHGDHQQQQAHQRYSPQESELRARYQGSPLGHREDYAASPMVSQPGGTIQISASPAAPYSPPIDGIRAAQQQQQQQQQQQQQQQQQQQQQLVVAGYSDPGSVNVKYEAETVAATESIKGSSTYTTLETVALAPAQPVQYAQYISASESFQQTVPSYSYSKPGDFYLSFPATSQAGGRAAEVDSPSSVYIKSDPTLTSSSLLSGGRLPPLHYEQPGSPGSQVTLHGSGTATYQYVKSNGDQYWSTGGSTPPSTLEFVQGYGGGVAAISANDAANMQLYPGGGYNGVGNGNGPQSPWTTLPPGAGDDSFEGPIMTAELKECVNCAANMTPLWRRDGTGHYLCNACGLYSKINGVNRPPIRCGKPKQPVAPTGGRRTGVQCANCHTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKEGIQTRKRKPKNPANLPGSLAGSSGMHKTELKASLLVESKLQLNMYPNGGSGGGSGGGDEHYLPVGALTTAQLNHAHSPLALPSAAALNRQTTLSVPPLEPINSRSAADLTSVITSTTAAHTDRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01048558;
- 90% Identity
- iTF_01048558;
- 80% Identity
- -