Nlec001054.1
Basic Information
- Insect
- Neodiprion lecontei
- Gene Symbol
- Gata5
- Assembly
- GCA_001263575.1
- Location
- NW:46332-56347[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-16 6.6e-13 47.3 2.5 1 35 524 557 524 558 0.97 2 2 2e-18 3.6e-15 54.6 7.4 1 35 583 616 583 617 0.97
Sequence Information
- Coding Sequence
- ATGCGACACGTTACTGCGGTTGAGGTAACCATGAAGGAGCCCCTGATCAGTAACCAGCAGGAGTCGAAGATAGACTGGGACGGAAATCGGACTGAGGGAAATTCGCCTCGGATGTCGCAACAACCCCCGGATGACCAGAACCAGGAGCCGAACCCCCGCAGCGTGATAACCGCCAGGCGGCATGTCAGAACCATAACCACAGCGGGACACATAACCGAGGGGACGGTCGGAGACCAGGAATCCGAATCCCCGATACCGAGTCCCGTTGGCGCCGGGTTGCAGCAGGCCATGCCGGTCGGCACCGCCCAGGAACAACACGAGCAACATCAGCACCAGCAGCCGCGATACCAGCAGGATGATCAGCACCAGCAACACTTCATCGAGGTATCGCGAGGCTCAAGTCCCGGTGATCCTCGTGACCAGCACCACGTTCCGACGTACGCCACCAACGGTCAGGACAACACCGATTCACAGGAGAGCGGAGAATCCACCATCACAATCGCTGTCAGCAAAGAACCACCGAGATACGGGACGCCGAGACCCGAGAGAACAGAAGTGAGGTATATGTACGGAAACCAGGAACAGGAAGTGCGTAGGGAGGAGCTGGTGGTGCATGGCGatcaccagcagcagcaggcaCACCAGAGGTACAGTCCTCAGGAGAGTGAGTTGCGGGCGAGGTACCAAGGGTCGCCGCTCGGTCACCGCGAGGATTACGCAGCCTCGCCAATGGTTTCGCAACCCGGGGGAACTATCCAGATATCGGCGTCACCGGCAGCTCCGTATTCCCCACCGATCGATGGGATCAGAGCAGctcagcaacagcagcagcaacagcaacagcagcaacaacaacagcaacagcaacagcaacagcagcagcagctcgtAGTCGCGGGATACTCGGATCCCGGTAGCGTGAATGTCAAGTACGAGGCTGAGACCGTCGCAGCGACAGAGAGCATCAAAGGCTCCAGTACTTACACGACCCTGGAGACCGTTGCTCTAGCCCCAACGCAGCCGGTTCAGTACGCGCAGTACATCTCAGCAAGCGAATCGTTTCAACAGACAGTTCCAAGTTACAGCTACTCGAAACCGGGTGATTTCTACCTGAGCTTTCCAGCCACAAGTCAAGCTGGAGGCCGAGCGGCAGAGGTCGACTCACCGAGCAGTGTCTACATAAAAAGTGACCCGACTCTCACCTCATCCTCGCTTCTAAGCGGTGGACGACTCCCGCCGCTGCATTACGAGCAGCCTGGATCTCCCGGGTCCCAGGTCACCCTCCATGGAAGCGGGACGGCTACCTACCAGTACGTCAAATCCAACGGGGACCAGTACTGGTCTACGGGGGGATCGACACCACCATCGACCCTTGAGTTCGTCCAAGGGTACGGGGGCGGCGTCGCGGCCATTTCGGCCAACGACGCCGCCAACATGCAGCTCTACCCTGGCGGCGGGTACAACGGTGTCGGTAACGGGAACGGACCCCAGTCACCATGGACCACTCTGCCGCCCGGTGCGGGCGACGACTCCTTCGAAGGCCCCATTATGACCGCCGAACTTAAGGAGTGCGTCAATTGCGCCGCCAACATGACACCTCTGTGGCGGAGAGACGGGACTGGACACTATCTCTGCAACGCCTGCGGCCTCTACAGCAAAATCAACGGTGTAAACAGACCTCCGATTAGATGCGGGAAGCCCAAACAGCCCGTCGCACCGACCGGGGGTCGCAGGACGGGAGTTCAATGCGCCAACTGTCACACCAGCAACACGACGCTCTGGAGACGCAACAACAACGGCGAGCCGGTTTGCAACGCGTGCGGACTTTACTACAAGCTGCACAACGTGAACCGACCTCTGAGCATGAAGAAGGAGGGAATCCAGACACGCAAGAGGAAGCCGAAGAACCCAGCAAACCTGCCGGGAAGTCTGGCTGGATCGAGTGGAATGCACAAGACCGAGCTTAAAGCGAGCTTACTCGTGGAATCGAAACTGCAGCTGAACATGTACACCAACGGCGGTTCGGGGGGTGGATCGGGTGGCGGTGACGAGCACTATTTACCCGTCGGTGCCCTCACCACTGCCCAGCTGAACCACGCGCATTCACCCCTAGCGCTGCCCTCCGCTGCCGCCCTTAATCGTCAGACCACCCTCTCGGTGCCCCCGCTGGAACCGATCAATAGTCGATCGGCGGCCGATCTAACGTCGGTAATAACCTCGACAACAGCCGCTCATACCGACAGAAACTGA
- Protein Sequence
- MRHVTAVEVTMKEPLISNQQESKIDWDGNRTEGNSPRMSQQPPDDQNQEPNPRSVITARRHVRTITTAGHITEGTVGDQESESPIPSPVGAGLQQAMPVGTAQEQHEQHQHQQPRYQQDDQHQQHFIEVSRGSSPGDPRDQHHVPTYATNGQDNTDSQESGESTITIAVSKEPPRYGTPRPERTEVRYMYGNQEQEVRREELVVHGDHQQQQAHQRYSPQESELRARYQGSPLGHREDYAASPMVSQPGGTIQISASPAAPYSPPIDGIRAAQQQQQQQQQQQQQQQQQQQQQQQLVVAGYSDPGSVNVKYEAETVAATESIKGSSTYTTLETVALAPTQPVQYAQYISASESFQQTVPSYSYSKPGDFYLSFPATSQAGGRAAEVDSPSSVYIKSDPTLTSSSLLSGGRLPPLHYEQPGSPGSQVTLHGSGTATYQYVKSNGDQYWSTGGSTPPSTLEFVQGYGGGVAAISANDAANMQLYPGGGYNGVGNGNGPQSPWTTLPPGAGDDSFEGPIMTAELKECVNCAANMTPLWRRDGTGHYLCNACGLYSKINGVNRPPIRCGKPKQPVAPTGGRRTGVQCANCHTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKEGIQTRKRKPKNPANLPGSLAGSSGMHKTELKASLLVESKLQLNMYTNGGSGGGSGGGDEHYLPVGALTTAQLNHAHSPLALPSAAALNRQTTLSVPPLEPINSRSAADLTSVITSTTAAHTDRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01049306;
- 90% Identity
- iTF_01049306;
- 80% Identity
- -