Npin019193.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- dmd-4
- Assembly
- GCA_021155775.2
- Location
- CM037743.2:42050108-42052656[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-25 1e-21 77.4 11.1 1 47 21 67 21 67 0.99 2 2 0.32 2.1e+03 -0.5 0.4 2 8 428 434 427 436 0.81
Sequence Information
- Coding Sequence
- ATGCTCCGTGGTAAGACGAAACGTCTTGACGAAGAGACGCGCGATTCCGACAGCAAGCAGAGGAGACCCAAATGCGCCCGGTGTAGAAATCACGGGCTGATATCCTGGCTGCGGGGTCACAAACGTGAATGTCGTTATCGGGAGTGCGTGTGTCCAAAATGCGCCTTAATTGCCGAAAGGCAACGAGTGATGGCTGCCCAGGTTGCTCTAAAGCGACAGCAGGCAGCGGAGGACGCGATCGCTCTGAGCATGGCGAAGGTAGCAACGGGTCAAAAACTGAATCGTCTACCGCCGGGAAAAATATTCGGAATGGCTGTGACGGAGCCTGATGCTACGGACCCGATATCGAACAACAACTCTGGCATGTCCAACAACGCAGCAGACAAAGACAAAATTCGTCAGAACGCCACAGAAAatacagaaagaaaaacgagctCTGCGGAGGAACCAGCTGGTCAGTGTGGAATCCTTCCGATCGTCGACCAGAAGATAACCAAAGCTTCGCGGGCTTCGAGTACCTCGGAAGTATGCCCTGAAGTTTGCCCTCAGTCTGCTGGTGAACGTTCGAATTCACAACGGTATAGAACGCTGCTGTTCAACGTAAACAAAACGCACGGAATTGAGAGAACTGAGTCAGCGGATTCAGGGAAGAAGCTGGAGGACGGAAATGATCCGGGATCGACCGTCTCTCAGGCGTCTGTCCAAACTCTCGCCAATTTATTCCCCAGCACAAAGCTCTCGGTATTGCAGTTGGTGCTTCAGCGATGTGGTCAGGACCTGTTGAAGGCCATCGAGTACTTTGCCGCCCAAACGGCTCTCGGGGCTGGCACCGCTTCCGGTTCCGCTTTCAGGCCCGTGCAGAATCTCAACGGCGGGATTAACCAGCCAACGCAAAGCGTCACTCTGCAGGGAATCCAAGGCGTGAACCACGGCCTCCAGAGCAACGTGCAGCAGCAGACGACCCCGGAGGTCCCGAATTTCTTCACCTTTCCGCCGACGTACTCGAGCTTTCCCCGCAATATTTACGGCGACAGTTACTGTCTGCTCAATATCGTGCCGGAGCAGTTGCAGCCGAAGAGCTCCAGCACGGAAACGGCGAACTTGACGCTCGCTAAAACCGGAAGTCCGCAGGAGGACAGCGTTGCTCTAAACGTTCAGTACAACAACTACTTCAATTCCAATATTCAACACCTTCGGGAACACATGTGCAATCAGATGATCGACCCGCACAGACAAGGCCTGCTTCATCTTCCTCCAATTTTACCGGGAATACCTTGCGTGCAACCCAACTGTGCGCAATGCTACAAATTCCCATAA
- Protein Sequence
- MLRGKTKRLDEETRDSDSKQRRPKCARCRNHGLISWLRGHKRECRYRECVCPKCALIAERQRVMAAQVALKRQQAAEDAIALSMAKVATGQKLNRLPPGKIFGMAVTEPDATDPISNNNSGMSNNAADKDKIRQNATENTERKTSSAEEPAGQCGILPIVDQKITKASRASSTSEVCPEVCPQSAGERSNSQRYRTLLFNVNKTHGIERTESADSGKKLEDGNDPGSTVSQASVQTLANLFPSTKLSVLQLVLQRCGQDLLKAIEYFAAQTALGAGTASGSAFRPVQNLNGGINQPTQSVTLQGIQGVNHGLQSNVQQQTTPEVPNFFTFPPTYSSFPRNIYGDSYCLLNIVPEQLQPKSSSTETANLTLAKTGSPQEDSVALNVQYNNYFNSNIQHLREHMCNQMIDPHRQGLLHLPPILPGIPCVQPNCAQCYKFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01048243;
- 90% Identity
- iTF_01048243;
- 80% Identity
- -