Npin012361.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- Sub1
- Assembly
- GCA_021155775.2
- Location
- CM037742.1:20416187-20417120[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-28 3.7e-24 84.8 0.4 1 52 55 107 55 107 0.96
Sequence Information
- Coding Sequence
- ATGCCGAAGTCAAAAAAGTATGTGGAGTCAAGTGATGACAGCAGCGACTCGGAGCCAAAATCAGAgaaaaaagtgtcaaaaaagtcaaaaagagaaaattcaGATGTCGAGGCATCCCAAAGCAAAAAAccaaagaaagagaaaaaggaagaagacaATGCTTGGGACTTGGGAAATAACCGGCAAGTCACGGTTAGAGAATTCAAGGGAAAGCTATTGATTGACATAAGAGAAATGTATTACGATAAGGAAGGAGAATTAAAGCCTGGTAAAAAAGGAATCAGTTTAAACACAGCCCAGTGGCGAAAATTTGTGGATGCAGTTGCAGACGTTGATGAAGCTGTTAAATCGATGTGTTAA
- Protein Sequence
- MPKSKKYVESSDDSSDSEPKSEKKVSKKSKRENSDVEASQSKKPKKEKKEEDNAWDLGNNRQVTVREFKGKLLIDIREMYYDKEGELKPGKKGISLNTAQWRKFVDAVADVDEAVKSMC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01048234;
- 90% Identity
- iTF_01048234;
- 80% Identity
- iTF_01048234;