Npin010006.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_021155775.2
- Location
- CM037742.1:4261964-4281880[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-18 1.4e-14 54.4 0.1 1 45 400 445 400 445 0.96 2 2 2e-18 4.2e-15 56.1 0.0 1 43 816 859 816 861 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCTTTACCAAGATACAATATACAGCAGCAGTCGCAGTGCATCGATAACGCAACCGCATCACATTTACCCGCCATCCCTCTGCCAGGATCCCCCAGGAAGTCAAAACCACCACCAACCAGTGTCGGCGGCTGCGACGGTACAGCTGAGGGTGAAACAAGAGCCGAATACACAAAACCGCGATCATTCAGCCGACGAGGAACAGGAACTGGACAAAAGGGTCGTAGAAGACGCGCGGCTCAGCTCCCAAGGCATAAAGCTCGAAACAGCGGATCGGGACCAGGACCTGGAGGAGGACGAAGACGACAAGATTGGCGAGGGCGCGACAAGAGAGGCGAGCCCTCTTCGCACTCTCAACTCAAATCTCCCTCGGGAACCGAACCAATCCAACATTATCGACACGGAAGGGGCCAAGGAACAAGAGGCAGATCTCGCGTTGGAGCGGGTTCAGGGGATTCAAGGACTGCTGAGGGTGAAGAAGGAGGAAGAGCTCCAGGAACCGCCGAGTTCCGTTGGGCTCGTATCCTGCCTCGAGGAGGGGGTCCGGCCAGTGGCTCCTCTCGGCAAAGAAACGGAGGAACGGCCCAGATTCTCCGTAGAGAACACACCAACCTCGCTGCCTTATCTCGGCATCGGCGTAACGAACAGACGTTCGAGTCCTCAACCTGTGGATTGGAAGCCATTGGACAAGTGCTACCTCTGCCTCGATGGCAAGCTGCCGCACGACGAACAACCGCCCCTCAGTCCGCAAAGTGAGACCAGCAGCAGTTCCCGGTCAGCAGAATCCCCGATGTCGGTCCAGGTCGACCCGGCGATGGCTGCGACTTTGGCGAGGGTTGCGGCCCTCGGTGGTGCGGCTGGTGGTGCTGCCGGGTATCCGACTCTCCTTCCTCACTGGTGTTTGCCCCCGAGGGAGGCGCCCCGGGTCGGGGTACCAGCTCACCAGGAGAGCGCCTCCGTCGTCGACCAGCCACTCGACCTCTCAGCAAAACCCAGAAACTCTCAGGATAACAACATATCTCTGTTGGAGCAACAAAAAATACCTCTCAGAATGCCGACGGGAATCGACCCAAAGAGCATTTTCAACTCGTGTTACCGGGCAAAGCCACGTATGACGGGACCTGGAGGTGTCGCCGGTGTTCACGGGGTCGTAGGTGCCGGAGGTGGTCGCAGGACTTACACCGAGGAGGAACTCCAGGCGGCGCTGCGTGACATCCAAAGCGGAAAGCTCGGGACGCGGAGGGCCGCGGTAATATACGGGATACCCCGTAGCACCCTAAGAAACAAGGTCTACAAGCTAGCGATGGAGAGGGAGCGGGAATCGTCCCTGATATCGCTATCCCACCCCCATCATCACAACGAGACCAGTGTTGTGCCTTCTACACCCAATGCGTCTCCCGCCATCGTCTCCGCATCCGTCTCCACGTCCGTCTGCCTGACTGCCACTCCGTCACCACAAGCGGACGAGggCGATGAGAAAGAGCTTTCGGGAGCGGAGGAGGAAAAGGAAGTCGAAAAGGCTCTTCTGAAGCCGCTACTATCCTTGGAGGATCTCGTGAGGTTTTCGGGCCTCGAAGGCGGTGGCGGGCATTCTCTTAGGGCGTTGCTTCAACAAGGACCTGAAACGGGAGCCGAATGGCCGGGTTTCGACCAGCAGACTTTCGCTCCGTACATCCAGAGGATGCTGGCGGCCGCAAGACCGTTCAAAGGTATGGAAACACCCGACTACCGTATCCCAGAGGTGATGAGGCGGTTGATGAGCGAGGACAAGCGATTGAGCAAGGATATGAACGGTGAACAGCAGCAGcaccatcaccatcatcatcagcaACAGCATCACcaccaccagcagcagcaacagcagcagcaacaacagcacCATCACCAGCATCAGCAGCACATGCGAGAGCCGATAACGAACGACGACTTTAATCCGAGCATAGAGGAGGAGGCAAGCGACAGTGCTCAGGGTAGAGCGATCCTGAAAATTCCGTCCTACAAGCCGGCGAACACGCCGGGGTCAAGTAAAAACGGTGAACCGTCGACGGTCGGTTTTCCTCAGAGTTTTGCCGGCGGTTCGGCGATGAGTGCGGCGGGTAGTCCGAACCTCTTGGAGCGTTTGAGCCCGGCGTTCTCCGGGACGAGCAGCCCGACGAACTCGCTGGCCGGGAAAGGGGTCGGGGTCAACTTTCGGGACGTGATAGCCAAGAGCATAAGCGTCAAGTTCCAGGAGGGCATGCCGCCCGGCGGTGGGGCCCCGCAATCCCAACTCTCCGAGTCGAACCCCTACAAACGGGGTAGGTACACCCCGCCACAACCGCCCCAGCAGTCCCAGGTACCCACGAAACCGGGGGGCCCGGACGGCAAGCCGAAGCCAGGAACGGGGGGCAAGGGAACACGTCCGAAGAGGGGGAAGTACCGGAACTACGACCGGGACAGCCTCGTCGAGGCGGTGAGGGCTGTCCAACGAGGCGAGATGAGCGTACACCGGGCGGGAAGCTATTACGGTGTGCCGCACTCTACCCTCGAGTACAAGGTCAAGGAGCGCCATCTGATGCGACCACGTAAACGGGACCAGAAACCGCAGGACGAAAAGGCTAAGGAGGCGGCCGTAGCGGCGGCCGCCATGCGGCAGGTCGGTGGTCAGGACAAGAAATCGCAGCCGGCGAAACCCCTGAAGACCTTCACTCCACCCGGTCCGATACCAGGGCCCAACGGATTGAAAATGCCGCCGTTCATGGAGGGCATGCCCCACCTGCCGTTCGCCCACCCGTTCAACTTTTGGGGCCCCGCGCCGTTCATTGCGCCCCCCTTTATATCCGGGGCCAATGTCTCCGCCATGATACCCGAGCAGTATTTCGCCACCCAGAGAATGCGGGGGCTCCAGGAACAGCAGAGAAACATCGCGCAtcaccagcagcagcaacagcagcagcagagggagagggagggcCTTGGGGGCCCGCCGGAAGCGGCTGGGGCCTCGAATTCCCGGGCGGTTGGCCCGGCACTGGGTAAAAGCACGCGGGAGATGGCCGAGAGTCTTTACGACGGAACGGGGACGAACGGTAGCTTCCTCGACAACCTGATCAGGTCCAGCCTCGAAACGGGAATGCCCCGGGATCAGCGGGCCCTCGCAGAGGCCCGGAaccaacaacagcaacagcaacaacaacaggcCCCCCACCACGGCCCCGAGACAATGAGCAACAAGGCGCTGATCGACCAGCTCTGCAGGAACTCGAGGCGCACACCGCTCACGAGGATCCCGCAGGAGGGGGAGGAAGAGGCGGCCTACCGGGGATTGGGACGCACGCTTCCCGAAAGACCCGAGCGCGTCCCGACCGTCGATTTGAGTCCCTCGCCGTCGGAACGGGGCCGCACGGATGACGGAAGTGACCGACTGACGTCACCGCCGACACCATCGTCCGTTTCGCGGGCCGGAAGTTGCAGAGACGAGGAGACCAGGGACTCGCGAAACGACGGTAGCAGCAGGGAGAGGGAGGGGTACAACGGGCAGGACGATAGCAGGTCGGAGAGGGGCGatggggagagggagagggacaGATCGAAGACAATGACGCTGCAGCAGCAACTTAACCACTACCCGGACTTACACAAGATGTACGCCGCGTCAACTGACAAAAGTGCCTGTGATAGTAAACTTATAGTAGATCAGTCGAGCCAGAAACCATctcagcaacagcagcaacaacaacagcagcaaaaCAGCGAGTACAGCAGGTCCGCGGTTATGGGTGGCCTTGTAGCACAGCTTCAACGAGGCTACAACCCGACGACGAGGCCCTCTGTCGAGTCGCAGccgcaacagcagcaacagcagcaacagcatcAACAACAGCAGAGCAATCACGTCGCGGTAGAGCGCGCCACTGTCCTCAAAATGGAagactcggtagagcagtag
- Protein Sequence
- MGRRRWKLYQDTIYSSSRSASITQPHHIYPPSLCQDPPGSQNHHQPVSAAATVQLRVKQEPNTQNRDHSADEEQELDKRVVEDARLSSQGIKLETADRDQDLEEDEDDKIGEGATREASPLRTLNSNLPREPNQSNIIDTEGAKEQEADLALERVQGIQGLLRVKKEEELQEPPSSVGLVSCLEEGVRPVAPLGKETEERPRFSVENTPTSLPYLGIGVTNRRSSPQPVDWKPLDKCYLCLDGKLPHDEQPPLSPQSETSSSSRSAESPMSVQVDPAMAATLARVAALGGAAGGAAGYPTLLPHWCLPPREAPRVGVPAHQESASVVDQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKSIFNSCYRAKPRMTGPGGVAGVHGVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESSLISLSHPHHHNETSVVPSTPNASPAIVSASVSTSVCLTATPSPQADEGDEKELSGAEEEKEVEKALLKPLLSLEDLVRFSGLEGGGGHSLRALLQQGPETGAEWPGFDQQTFAPYIQRMLAAARPFKGMETPDYRIPEVMRRLMSEDKRLSKDMNGEQQQHHHHHHQQQHHHHQQQQQQQQQQHHHQHQQHMREPITNDDFNPSIEEEASDSAQGRAILKIPSYKPANTPGSSKNGEPSTVGFPQSFAGGSAMSAAGSPNLLERLSPAFSGTSSPTNSLAGKGVGVNFRDVIAKSISVKFQEGMPPGGGAPQSQLSESNPYKRGRYTPPQPPQQSQVPTKPGGPDGKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKPQDEKAKEAAVAAAAMRQVGGQDKKSQPAKPLKTFTPPGPIPGPNGLKMPPFMEGMPHLPFAHPFNFWGPAPFIAPPFISGANVSAMIPEQYFATQRMRGLQEQQRNIAHHQQQQQQQQREREGLGGPPEAAGASNSRAVGPALGKSTREMAESLYDGTGTNGSFLDNLIRSSLETGMPRDQRALAEARNQQQQQQQQQAPHHGPETMSNKALIDQLCRNSRRTPLTRIPQEGEEEAAYRGLGRTLPERPERVPTVDLSPSPSERGRTDDGSDRLTSPPTPSSVSRAGSCRDEETRDSRNDGSSREREGYNGQDDSRSERGDGERERDRSKTMTLQQQLNHYPDLHKMYAASTDKSACDSKLIVDQSSQKPSQQQQQQQQQQNSEYSRSAVMGGLVAQLQRGYNPTTRPSVESQPQQQQQQQQHQQQQSNHVAVERATVLKMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01048151;
- 90% Identity
- iTF_01048151;
- 80% Identity
- -