Nlec001996.1
Basic Information
- Insect
- Neodiprion lecontei
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001263575.1
- Location
- NW:492825-594359[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 4.5e-15 54.4 0.1 1 45 441 486 441 486 0.96 2 2 1e-18 1.4e-15 56.0 0.0 1 43 857 900 857 902 0.94
Sequence Information
- Coding Sequence
- atggcgGATTGCTCCTATGCCCGTTGCATACAGGAACGGCGACACATTCGACGTGAGCTACTGCGATGGACGAAGAATATGGTTTACGTAGTTGGTCTAGAAAGGGTAGCGGAAGAATTGATGGGCCGTAGGAGATGGAAGCTTTACCAAGATACAATATACAGCAGCAGTCGCAGTGCATCGATAACGCAACCGCATCACATTTACCCGCCATCCCTCTGCCAGGATCCCCCAGGAAGTCAAAACCACCACCAACCAGTGTCGGCGGCTGCGACGGTACAGCTGAGGGTGAAACAAGAGCCGAATACACAAAACCGCGATCATTCAGCCGACGAGGAACAGGAACTGGACAAAAGGGTCGTAGAAGACGCGCGGCTCAGCTCCGAAGGCATAAAGCTCGAAACAGCGGATCGGGACCAGGACCTGGAGGAGGACGAAGACGACAAGATTGGCGAGGGCGCGACAAGAGAGGCGAGCCCTCTTCGCACTCTCAACTCAAATCTCCCTCGGGAACCGAACCAATCCAACATTATCGACACGGAAGGGGCCAAGGAACAAGAGGCAGATCTCGCGTTGGAGCGGGTTCAGGGGATTCAAGGACTGCTGAGGGtgaagaaggaggaagagCTCCAGGAACCGCCGAGTTCCGTTGGGCTCGTATCCTGCCTCGAGGAGGGGGTCCGGCCAGTGGCTCCTCTCGGCAAAGAAACGGAGGAACGGCCCAGATTCTCCGTAGAGAACACACCAACCTCGCTGCCTTATCTCGGCATCGGCGTAACGAACAGACGTTCGAGTCCTCAACCTGTGGATTGGAAGCCATTGGACAAGTGCTACCTCTGCCTCGATGGCAAGCTGCCGCACGACGAACAACCGCCCCTCAGTCCGCAAAGTGAGACCAGCAGCAGTTCCCGGTCAGCAGAATCCCCGATGTCGGTCCAGGTCGACCCGGCGATGGCTGCGACTTTGGCGAGGGTTGCGGCCCTCGGTGGTGCGGCTGGTGGTGCTGCCGGGTATCCGACTCTCCTTCCTCACTGGTGTTTGCCCCCGAGGGAGGCGCCCCGGGTCGGGGTACCAGCTCACCAGGAGAGCGCCTCCGTCGTCGACCAGCCACTCGACCTCTCAGCAAAACCCAGAAACTCTCAGGATAACAACATATCTCTGTTGGAGCAACAAAAAATACCTCTCAGAATGCCGACGGGAATCGACCCAAAGAGCATTTTCAACAGCTCGTGTTACCGGGCAAAGCCACGTATGACGGGACCTGGAGGTGTCGCCGGTGTTCACGGGGTCGTAGGTGCCGGAGGTGGTCGCAGGACTTACACCGAGGAGGAACTCCAGGCGGCGCTGCGTGACATCCAAAGCGGAAAGCTCGGGACGCGGAGGGCCGCGGTAATATACGGGATACCCCGTAGCACCCTAAGAAACAAGGTCTACAAGCTAGCGATGGAGAGGGAGCGGGAATCGTCCCTGATATCGCTATCCCACCCCCATCATCACAACGAGACCAGTGTTGTGCCTTCTACACCCAATGCGTCTCCCGCCATCGTCTCCGCATCCGTCTCCACGTCCGTCTGCCTGACTGCCACTCCGTCACCACAAGCGGACGAGGGCGATGAGAAAGAGCTTTCGGGAGcggaggaggaaaaggaagtCGAAAAGGCTCTTCTGAAGCCGCTACTATCCTTGGAGGATCTCGTGAGGTTTTCGGGCCTCGAAGGCGGTGGCGGGCATTCTCTTAGGGCGTTGCTTCAACAAGGACCTGAAACGGGAGCCGAATGGCCGGGTTTCGACCAGCAGACTTTCGCTCCGTACATCCAGAGGATGCTGGCGGCCGCAAGACCGTTCAAAGGTATGGAAACACCCGACTACCGTATCCCAGAGGTGATGAGGCGGTTGATGAGCGAGGACAAGCGATTGAGCAAGGACATGAACGGTgaacagcagcagcaccatcaccatcatcatcagcaacagcatcaccaccaccagcagcagcaacagcagcagcaacaacagcacCATCACCAGCATCAGCAGCACATGCGAGAGCCGATAACGAACGACGACTTTAATCCGAGCATAGAGGAGGAGGCAAGCGACAGTGCTCAGGGTAGAGCGATCCTGAAAATTCCGTCCTACAAGCCGGCGAACACGCCGGGGTCAAGTAAAAACGGTGAACCGTCGACGGTCGGTTTTCCTCAGAGTTTTGCCGGCGGTTCGGCGATGAGTGCGGCGGGTAGTCCGAACCTCTTGGAGCGTTTGAGCCCGGCGTTCTCCGGGACGAGCAGCCCGACGAACTCGCTGGCCGGGAAAGGGGTCGGGGTCAACTTCCGGGACGTGATAGCCAAGAGCATAAGCGTCAAGTTCCAGGAGGGCATGCCGCCCGGCGGTGGGGCCCCGCAATCCCAACTCTCCGAGTCGAACCCCTACAAACGGGGTAGGTACACCCCGCCACAACCGCCCCAGCAGTCCCAGGTACCCACGAAACCGGGGGGCCCGGACGGCAAGCCGAAGCCAGGAACGGGGGGCAAGGGAACACGTCCGAAGAGGGGGAAGTACCGGAACTACGACCGGGACAGCCTCGTCGAGGCGGTGAGGGCTGTCCAACGAGGCGAGATGAGCGTACACCGGGCGGGAAGCTATTACGGTGTGCCGCACTCTACCCTCGAGTACAAGGTCAAGGAGCGCCATCTGATGCGACCACGTAAACGGGACCAGAAACCGCAGGACGAAAAGGCTAAGGAGGCGGCCGTAGCGGCGGCCGCCATGCGGCAGGTCGGTGGTCAGGACAAGAAATCGCAGCCGGCGAAACCCCTGAAGACCTTCACTCCACCCGGTCCGATACCAGGGCCCAACGGATTGAAAATGCCGCCGTTCATGGAGGGCATGCCCCACCTGCCGTTCGCCCACCCGTTCAACTTTTGGGGCCCCGCGCCGTTCATTGCGCCCCCCTTTATATCCGGGGCCAATGTCTCCGCCATGATACCCGAGCAGTATTTCGCCACCCAGAGAATGCGGGGGCTCCAGGAACAGCAGAGAAACATCGCGCAtcaccagcagcagcaacagcagcagcagagggagagggagggcCTTGGGGGCCCGCCGGAAGCGGCTGGGGCCTCGAATTCCCGGGCGGTTGGCCCGGCTCTGGGTAAAAGCACGCGGGAGATGGCCGAGAGTCTTTACGACGGAACGGGGACGAACGGTAGCTTCCTCGACAACCTGATCAGGTCCAGCCTCGAAACGGGAATGCCCCGGGATCAGCGGGCCCTCGCAGAGGCCCGGAaccaacaacagcaacagcaacaacaacaggcCCCCCACCACGGCCCCGAGACAATGAGCAACAAGGCGCTGATCGACCAGCTCTGCAGGAACTCGAGGCGCACACCGCTCACGAGGATCCCGCAGGAGGGGGAGGAAGAGGCGGCCTACCGGGGATTGGGACGCACGCTTCCCGAAAGACCCGAGCGCGTCCCGACCGTCGATTTGAGTCCCTCGCCGTCGGAACGGGGCCGCACGGATGACGGAAGTGACCGACTGACGTCACCGCCGACACCATCGTCCGTTTCGCGGGCCGGAAGTTGCAGAGACGAGGAGACCAGGGACTCGCGAAACGACGGTAGCAGCAGGGAGAGGGAGGGGTACAACGGGCAGGACGATAGCAGGTCGGAGAGGGGCGAtggggagagggagagggacaGATCGAAGACAATGACGCTGCAGCAGCAACTTAACCACTACCCGGACTTACACAAGATGTACGCCGCGTCAACTGACAAAAGTGCCTGTGATAGTAAACTTATAGTAGATCAGTCGAGCCAGAAACCATctcagcaacagcagcaacaacaacagcagcaaaaCAGCGAGTACAGCAGGTCCGCGGTTATGGGTGGCCTTGTAGCACAGCTTCAACGAGGCTACAACCCGACGACGAGGCCCTCTGTCGAGTCGCAGccgcaacagcagcaacagcagcaacagcagcaacaacagcagagCAATCACGTCGCGGTAGAGCGCGCCACTGTCCTCAAAATGGAAGACTCGGTAGAGCAGTAG
- Protein Sequence
- MADCSYARCIQERRHIRRELLRWTKNMVYVVGLERVAEELMGRRRWKLYQDTIYSSSRSASITQPHHIYPPSLCQDPPGSQNHHQPVSAAATVQLRVKQEPNTQNRDHSADEEQELDKRVVEDARLSSEGIKLETADRDQDLEEDEDDKIGEGATREASPLRTLNSNLPREPNQSNIIDTEGAKEQEADLALERVQGIQGLLRVKKEEELQEPPSSVGLVSCLEEGVRPVAPLGKETEERPRFSVENTPTSLPYLGIGVTNRRSSPQPVDWKPLDKCYLCLDGKLPHDEQPPLSPQSETSSSSRSAESPMSVQVDPAMAATLARVAALGGAAGGAAGYPTLLPHWCLPPREAPRVGVPAHQESASVVDQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKSIFNSSCYRAKPRMTGPGGVAGVHGVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESSLISLSHPHHHNETSVVPSTPNASPAIVSASVSTSVCLTATPSPQADEGDEKELSGAEEEKEVEKALLKPLLSLEDLVRFSGLEGGGGHSLRALLQQGPETGAEWPGFDQQTFAPYIQRMLAAARPFKGMETPDYRIPEVMRRLMSEDKRLSKDMNGEQQQHHHHHHQQQHHHHQQQQQQQQQQHHHQHQQHMREPITNDDFNPSIEEEASDSAQGRAILKIPSYKPANTPGSSKNGEPSTVGFPQSFAGGSAMSAAGSPNLLERLSPAFSGTSSPTNSLAGKGVGVNFRDVIAKSISVKFQEGMPPGGGAPQSQLSESNPYKRGRYTPPQPPQQSQVPTKPGGPDGKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKPQDEKAKEAAVAAAAMRQVGGQDKKSQPAKPLKTFTPPGPIPGPNGLKMPPFMEGMPHLPFAHPFNFWGPAPFIAPPFISGANVSAMIPEQYFATQRMRGLQEQQRNIAHHQQQQQQQQREREGLGGPPEAAGASNSRAVGPALGKSTREMAESLYDGTGTNGSFLDNLIRSSLETGMPRDQRALAEARNQQQQQQQQQAPHHGPETMSNKALIDQLCRNSRRTPLTRIPQEGEEEAAYRGLGRTLPERPERVPTVDLSPSPSERGRTDDGSDRLTSPPTPSSVSRAGSCRDEETRDSRNDGSSREREGYNGQDDSRSERGDGERERDRSKTMTLQQQLNHYPDLHKMYAASTDKSACDSKLIVDQSSQKPSQQQQQQQQQQNSEYSRSAVMGGLVAQLQRGYNPTTRPSVESQPQQQQQQQQQQQQQSNHVAVERATVLKMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01048821;
- 90% Identity
- iTF_01048821;
- 80% Identity
- -