Npin025305.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- Atf3
- Assembly
- GCA_021155775.2
- Location
- CM037745.1:17595604-17600765[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 4.3e+02 1.9 0.3 6 25 85 104 83 108 0.85 2 2 1.7e-16 2.2e-13 50.9 13.5 2 64 132 194 131 195 0.96
Sequence Information
- Coding Sequence
- atgtaTAACTTAAACGTGAACGTGAATCCCAGCCCCGCCGCAGCTGCAGGTCTGCTAGGCGTCGCGGCGGCCGAGGTCACGCCAAGGACGccagaaattttgaattctctAATCGCCATGACCAATCCCTTCGAGGGTTATCCACACGAGCGAAACCGCGAGAGGGCGGATTCTAGCAGCAGCAATGAACCGAGCCCTCCAAGCGTCCAGCACACCTGTAGTCAACTTATTAAAGAAGgCTTAAAGTTGACGTTACAAACGAAAAGACGGGCCAATGGTAGCGGGGACGAGTGcaggaaaaaaacaagaaaagaagATGGTAGTGCAGACGACGAAGAAGATGACGAAGGAAGTAGCACCAGCGGTCGTGGTGGTGGGTTGACACCGGAGGATGAAGAGCGGCGTAGAAGAAGGCGGGAGCGCAATAAAATAGCAGCGACGAAATGCCGGctaaaaaaacgtgaaaaaacgGTGATACTCGTGCAAGAATCGGAGGTATTAGAGACCCAGAACCACGATTTAAAATCACAGATACAGGAACTTGAGACGCAGAGGCGCCGATTAGTGGAAATGCTGAGCGTTCACAGTCCGACGTGTCTGAAACAAGGTGGTGCTAAcgaaagttcttttcaacaatttaCCGAACCCTTACCTCTGCCCAGTTACCAAGAAAACTTCGCCCAATCCACCTTGAACCAACCTCAAAACTGCGTCACGGATTACCCCGTAAAAGTTGAAGGGTATGGAAACTCCGGGCAGGATTTTTACCGGCAAAATAGTCCTTATATACCTACGTCGGATGCCGGTTGTACGGTTTAG
- Protein Sequence
- MYNLNVNVNPSPAAAAGLLGVAAAEVTPRTPEILNSLIAMTNPFEGYPHERNRERADSSSSNEPSPPSVQHTCSQLIKEGLKLTLQTKRRANGSGDECRKKTRKEDGSADDEEDDEGSSTSGRGGGLTPEDEERRRRRRERNKIAATKCRLKKREKTVILVQESEVLETQNHDLKSQIQELETQRRRLVEMLSVHSPTCLKQGGANESSFQQFTEPLPLPSYQENFAQSTLNQPQNCVTDYPVKVEGYGNSGQDFYRQNSPYIPTSDAGCTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773537;
- 90% Identity
- iTF_01047999; iTF_00938411; iTF_01303055; iTF_01412847; iTF_01413903; iTF_00939264; iTF_01199886; iTF_00059925; iTF_01411224; iTF_01412053; iTF_00173914; iTF_00174769; iTF_00175511; iTF_00718272; iTF_00719125;
- 80% Identity
- iTF_01047999;