Nlec007984.1
Basic Information
- Insect
- Neodiprion lecontei
- Gene Symbol
- Atf3
- Assembly
- GCA_001263575.1
- Location
- NW:259455-288595[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.3 1.4e+02 1.9 0.3 6 25 85 104 83 108 0.85 2 2 1.5e-16 6.9e-14 50.9 13.5 2 64 132 194 131 195 0.96
Sequence Information
- Coding Sequence
- atgtaTAACTTAAACGTGAACGTGAATCCCAGCCCCGCCGCAGCTGCAGGTCTGCTAGGCGTCGCGGCGGCCGAGGTCACGCCAAGGACGccagaaattttgaattctctAATCGCCATGACCAATCCCTTCGAGGGTTATCCACACGAGCGAAACCGCGAGAGGGCGGATTCTAGCAGCAGCAATGAACCGAGCCCTCCAAGCGTCCAGCACACCTGTAGTCAACTTATTAAAGAAGgCTTAAAGTTGACGTTACAAACGAAAAGACGGGCCAATGGTAGCGGGGACGAGTGcaggaaaaaaacaagaaaagaagatGGTAGTGCAgacgacgaagaagatgaCGAAGGAAGTAGCACCAGCGGTCGTGGTGGTGGGTTGACACCGGAGGATGAAGAGCGGCGTAGAAGAAGGCGGGAGCGCAATAAAATAGCAGCGACGAAATGCCGGctaaaaaaacgtgaaaaaacgGTGATACTCGTGCAAGAATCGGAGGTATTAGAGACCCAGAACCACGATTTAAAATCACAGATACAGGAACTTGAGACGCAGAGGCGCCGATTAGTGGAAATGCTGAGCGTTCACAGTCCGACGTGTCTGAAACAAGGTGGTGCTAACGAAAGttcttttcaacaatttacCGAACCCTTACCTCTGCCCAGTTACCAAGAAAACTTCGCCCAATCCACCTTGAACCAACCTCAAAACTGCGTCACGGATTACCCCGTAAAAGTTGAAGGGTATGGAAACTCCGGGCAGGATTTTTACCGGCAAAATAGTCCTTATATACCTACGTCGGATGCCGGTTGTACGGTTTAG
- Protein Sequence
- MYNLNVNVNPSPAAAAGLLGVAAAEVTPRTPEILNSLIAMTNPFEGYPHERNRERADSSSSNEPSPPSVQHTCSQLIKEGLKLTLQTKRRANGSGDECRKKTRKEDGSADDEEDDEGSSTSGRGGGLTPEDEERRRRRRERNKIAATKCRLKKREKTVILVQESEVLETQNHDLKSQIQELETQRRRLVEMLSVHSPTCLKQGGANESSFQQFTEPLPLPSYQENFAQSTLNQPQNCVTDYPVKVEGYGNSGQDFYRQNSPYIPTSDAGCTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773537;
- 90% Identity
- iTF_01048639;
- 80% Identity
- iTF_01048639;