Basic Information

Insect: Neodiprion lecontei
Gene Symbol: nfxl1_1
Assembly: GCA_001263575.1
Location: NW:35599-39007[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.1 5.7e+03 -3.2 1.1 15 19 126 130 125 130 0.81

2 22 1.2 6.2e+03 -3.3 2.8 4 10 161 167 158 167 0.86

3 22 1.9e-07 0.001 18.4 17.0 1 19 175 192 175 192 0.99

4 22 4e-10 2.1e-06 26.9 16.0 1 19 228 246 228 246 0.99

5 22 0.36 1.9e+03 -1.7 0.7 8 14 251 257 250 257 0.76

6 22 0.74 4e+03 -2.7 0.8 5 10 270 275 270 275 0.86

7 22 2.5e-05 0.14 11.6 8.8 1 18 281 299 281 300 0.91

8 22 1.7 9.2e+03 -3.9 0.7 6 10 325 329 324 331 0.58

9 22 2.5e-05 0.14 11.6 8.8 1 18 335 352 335 353 0.97

10 22 0.72 3.9e+03 -2.7 0.4 1 5 362 366 362 366 0.92

11 22 0.0034 18 4.7 8.0 1 12 387 398 387 398 0.94

12 22 1.1 6.2e+03 -3.3 1.4 6 10 408 412 407 412 0.88

13 22 1.2e-07 0.00064 19.0 13.9 1 19 418 436 418 436 0.91

14 22 0.00017 0.93 8.9 8.9 9 19 484 494 482 494 0.90

15 22 0.0081 43 3.5 5.8 1 12 504 514 504 514 0.95

16 22 1.2 6.5e+03 -3.4 6.7 14 19 543 548 543 548 0.90

17 22 1.6 8.6e+03 -3.8 0.6 9 12 565 568 565 568 0.77

18 22 2 1.1e+04 -4.7 3.6 6 10 574 578 573 579 0.84

19 22 0.00023 1.3 8.5 3.7 1 11 584 594 584 595 0.94

20 22 2 1.1e+04 -5.2 4.5 6 10 611 615 607 615 0.71

21 22 5.9e-05 0.32 10.4 15.1 3 19 624 640 623 640 0.92

22 22 4.3e-05 0.23 10.8 9.7 1 16 685 699 685 705 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.1	5.7e+03	-3.2	1.1	15	19	126	130	125	130	0.81
2	22	1.2	6.2e+03	-3.3	2.8	4	10	161	167	158	167	0.86
3	22	1.9e-07	0.001	18.4	17.0	1	19	175	192	175	192	0.99
4	22	4e-10	2.1e-06	26.9	16.0	1	19	228	246	228	246	0.99
5	22	0.36	1.9e+03	-1.7	0.7	8	14	251	257	250	257	0.76
6	22	0.74	4e+03	-2.7	0.8	5	10	270	275	270	275	0.86
7	22	2.5e-05	0.14	11.6	8.8	1	18	281	299	281	300	0.91
8	22	1.7	9.2e+03	-3.9	0.7	6	10	325	329	324	331	0.58
9	22	2.5e-05	0.14	11.6	8.8	1	18	335	352	335	353	0.97
10	22	0.72	3.9e+03	-2.7	0.4	1	5	362	366	362	366	0.92
11	22	0.0034	18	4.7	8.0	1	12	387	398	387	398	0.94
12	22	1.1	6.2e+03	-3.3	1.4	6	10	408	412	407	412	0.88
13	22	1.2e-07	0.00064	19.0	13.9	1	19	418	436	418	436	0.91
14	22	0.00017	0.93	8.9	8.9	9	19	484	494	482	494	0.90
15	22	0.0081	43	3.5	5.8	1	12	504	514	504	514	0.95
16	22	1.2	6.5e+03	-3.4	6.7	14	19	543	548	543	548	0.90
17	22	1.6	8.6e+03	-3.8	0.6	9	12	565	568	565	568	0.77
18	22	2	1.1e+04	-4.7	3.6	6	10	574	578	573	579	0.84
19	22	0.00023	1.3	8.5	3.7	1	11	584	594	584	595	0.94
20	22	2	1.1e+04	-5.2	4.5	6	10	611	615	607	615	0.71
21	22	5.9e-05	0.32	10.4	15.1	3	19	624	640	623	640	0.92
22	22	4.3e-05	0.23	10.8	9.7	1	16	685	699	685	705	0.88

Sequence Information

Coding Sequence: atgaagaaatttaagAGAGCGCAAGCGCAAAATCAAGCGGCGATCGAAAGGCACATGGTTACACATCCTATGGTAGAATCGTCGAGcgacgaagaagatgaaactGGGCAAGAGATATTGGAACAAGCTGTTGGAAAGGTCCTGACTTCCTACCAAGATCAAGGTGGAGATCCTGAAAAAATCCTATCTTATTTGGCTGATACTTTTCAATCTAACGGCGCTGTTTGCTTGATATGTATTTCGTCGGTGAAGAAAACAGACGCAATATGGAGCTGTACCATGTGCTACTCATTTATGCATCTCCCGTGCATTCAGCACTGGATTCGAGACAGCCTTGCTTACAAGCGGGACCGTGGAATTTCTCAATTATGGGCATGCCCAAAATGTCGTACAGAGTATGCCGAAGACGAGGCTCCGCAACACTATGAATGTTTTTGCGGAAAGACGAGAGATCCATCATATCAACCATGGTGCGTACCACATTCTTGCGGAGAAGCATGTGGAAAACTTCTCCAACCAAAATGCGGGCATTCCTGTGTTCTGCTATGTCATCCCGGACCTTGTCCTCCGTGTCCTAAAATGGTTTCTTCCAAATGCTACTGTGCCAAATCAGCCCCTCGTCCGAGACGCTGTAACGCCAAAGAATGGAGCTGCGGCGCTGTTTGCAGCAGGAATTTGAAATGCGGGAAACACACGTGCACAGAAATGTGTCATAGTGGCGAGTGTCCACCATGTCCGGAGAAGGTTTCCGCGACTTGTCACTGTGGGAATAAGACCGAGCTGAGGCCATGTTTCGACACGGTGTGGCGGTGCGATAAACCGTGCAGAAAATCCTTATCTTGTAACGTCCACGTTTGCCAAGACGTCTGCCATCTGCCCGGAGACTGTGGCGATTGCCTGACGGCCAAAAACAGGTCGTGTCCGTGCGGGAAGAGGAAGTACAAGATTTCCTGCAAGCAGGAGGCAGCGACGTGCGGTGATACTTGCGAAAAATTACTGGATTGCGGAGCACATTACTGCAACAAACGCTGTCATCTCGATAGCTGCGGGCAATGCTTGGAGGTGGTTACCAAATCGTGCAAATGCGGTGCTCACAAAAAAGAGATAGCTTGCGCCAAAGTGTTTCACTGCGACACGAAGTGTAAGCAGATTCGGTTGTGCGGACGGCATCcgtgcaataaaaaatgctGCGACTGTgtgaagaagaataatttcaatccttGCGAAAAGACTTGCGACCGTACTTTAAGTTGTCGCAAACACAAATGTTCCGCTCCTTGCCACAGCGGCCCATGCTATCCCTGCCAGAGGACAGACACTATACAGTGTCGATGCGGTTCGAGCAAAATTGTCATACCTTGTGGTACAGCCAAGAAGATTAAACCACCTCACTGtaataaaatgtgtaaaattcCACCGATTTGCCACCATCCAAAACGAGAGTCGCACAAATGCCACCAAGGACAGTGTCCACCCTGCAAGAAACAATGTGCCTTGGCGCATAAAAAGTGCGGTCACATTTGCCCAGTGCCCTGTCACACCAAGGTATGGGTAAAGGTGAATGGTATAACTCAACCAGCTGGGCCGTGGGAAAAACAGAGGGACAAGATGCAGCTGAAAACTCTGCCTTGTCCACCCTGCCAAGTTTCAGTAATGGTCACTTGTTTAGGTGGGCATGAAACTTTGCCGTGGCCGTGCCACAAGGCGGTATCAAGCTGTTGCCAAAGGCCTTGCGGACAATTGTTGAGCTGCACAAATCATACCTGCATGTTATTGTGTCACGTTGTACAAGCGTCGGGAGACAATGGACAACCAACGCCATGTGAAGAATGCGAAAAGCCATGCGTCATACCCAGACCTCAAGGATGCACTCATACTTGCCCCAGCATCTGTCATCCGGCTCCTTGTAAACCCTGCAAACAAATCGTACGACTTCCTTGTCACTGCAGCATCAATACTTTGTATATTCGCTGCTCTGAGCTCACTTCGGCTAACGAAGAGACTAAGAAGGAGATGTTCAAGTGTGGAAATCAGTGCCCTAAGAATTATCCATGCGGGCATCGTTGCATAGATGATTGTCATCCAGGATTGTGTGAACGAGCTGAagagtgtaataaaaaagtgaaaatttggtGCAAGTGTAAAAGATTGAAGAAAGACATTTCTTGTCGCATTATAAGATCTGGCGGAGCTGTAGTTGAATGTGACGCTGTGTGtcaggagaaaaagaaagaacgaattCAAGCCCAAGAGGCTGAGGcagagaggaaaaagagagaagaagaattgCGCAACCAAAGAGAGGtggaaaagtttgaaagaaagTTCAAACCTAGACGTAAGTGTAAGGACAAGACGAATAACGAACCGCGCGTTAAGGAAACAAAGTTTAACTACCTTAAGTGGCTCGCAGCTATCTTGGTATTTGCCATAGCTTGCCTGGTCGCTTTTTATAGCGTGGACATGCAAATGGTACCTCATTAA
Protein Sequence: MKKFKRAQAQNQAAIERHMVTHPMVESSSDEEDETGQEILEQAVGKVLTSYQDQGGDPEKILSYLADTFQSNGAVCLICISSVKKTDAIWSCTMCYSFMHLPCIQHWIRDSLAYKRDRGISQLWACPKCRTEYAEDEAPQHYECFCGKTRDPSYQPWCVPHSCGEACGKLLQPKCGHSCVLLCHPGPCPPCPKMVSSKCYCAKSAPRPRRCNAKEWSCGAVCSRNLKCGKHTCTEMCHSGECPPCPEKVSATCHCGNKTELRPCFDTVWRCDKPCRKSLSCNVHVCQDVCHLPGDCGDCLTAKNRSCPCGKRKYKISCKQEAATCGDTCEKLLDCGAHYCNKRCHLDSCGQCLEVVTKSCKCGAHKKEIACAKVFHCDTKCKQIRLCGRHPCNKKCCDCVKKNNFNPCEKTCDRTLSCRKHKCSAPCHSGPCYPCQRTDTIQCRCGSSKIVIPCGTAKKIKPPHCNKMCKIPPICHHPKRESHKCHQGQCPPCKKQCALAHKKCGHICPVPCHTKVWVKVNGITQPAGPWEKQRDKMQLKTLPCPPCQVSVMVTCLGGHETLPWPCHKAVSSCCQRPCGQLLSCTNHTCMLLCHVVQASGDNGQPTPCEECEKPCVIPRPQGCTHTCPSICHPAPCKPCKQIVRLPCHCSINTLYIRCSELTSANEETKKEMFKCGNQCPKNYPCGHRCIDDCHPGLCERAEECNKKVKIWCKCKRLKKDISCRIIRSGGAVVECDAVCQEKKKERIQAQEAEAERKKREEELRNQREVEKFERKFKPRRKCKDKTNNEPRVKETKFNYLKWLAAILVFAIACLVAFYSVDMQMVPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01303874;
90% Identity: iTF_01049321;
80% Identity: -