Basic Information

Insect: Neodiprion lecontei
Gene Symbol: bab2
Assembly: GCA_001263575.1
Location: NW:2896-27362[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.3e-12 1.7e-09 36.5 0.0 1 39 374 413 374 417 0.90

2 4 1.7e-12 2.3e-09 36.1 0.1 2 39 429 466 428 469 0.94

3 4 6.3e-19 8.4e-16 56.7 0.0 2 45 484 528 483 528 0.97

4 4 3.6e-19 4.9e-16 57.5 0.1 1 42 535 577 535 578 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.3e-12	1.7e-09	36.5	0.0	1	39	374	413	374	417	0.90
2	4	1.7e-12	2.3e-09	36.1	0.1	2	39	429	466	428	469	0.94
3	4	6.3e-19	8.4e-16	56.7	0.0	2	45	484	528	483	528	0.97
4	4	3.6e-19	4.9e-16	57.5	0.1	1	42	535	577	535	578	0.97

Sequence Information

Coding Sequence: ATGGCGGGGCAGCACTACTGCCTTCGCTGGAACAATTACCAGTCGAATATGACTTCCGTATTTCATCAGTTACTGCAGACCGAAGCTTTCGTCGACGTTACTTTGGCCTGCAACGAGGCATCGCTCAAGGCCCACAAGgtCGTCTTGTCAGCGTGCAGTTCGTACTTTCAAAAACTACTTCTGTCAAACCCGTGCAAACATCCGACAATCATCATGCCCCAGGATGTTTGTTTCACCGATCTGAAATTCATCATCGAATTCGTATACAGAGGTGAAATTGACGTGTCGCAGGCTGAGCTTCAGTCACTCCTGAAGACTGCGGATCAATTGAAGATAAAGGGCCTCTGCGAGGTACCGGAAAGTAGAGAGGGTCCACCGTCTTCTGTTAGCCTAAGTTCACCGCCTAGGGATCGTGATTCTTCCGGTACCGGTACACCACGTTTGAATTATACAAAGCTTAGAAGACAGCATCATCCGAGGTATAAAAGGCCCAGGTTTGAGGCAAGGTCCTCGGATACACCGGGTAACAGGCATTTCGAGAAGTACAAAGAAGAGGAAACCGAAGGATTCAACAATCGGGACGACAAAGAGAATCACAGGGACTGGCAGACCGAAGATGAAGAGTTCGGTGAGCCGACAATAGTTTTAGAATCGCGACAAAAGGAAATAAGCAACGGTAACACGAACAACAATAACGGTGAGATGTTTTGTCACACAGGAATGGGACATTACGGGCACCATACGGATCCAGGAGACGTTGATTTACCACCCGAAACTCAACCTACACCTCCCAGTGCTACTCTAGTTGGTACTACGATAACGCATTTGAGAGACCCTGATCACCAATCGACAGaaatacaaaattgtgacagtgttaaaataaaatttgagacACTGCACACGATGGACTCGACGGACACGATAGATATAGATAGTCATATGTCAGATCGAGCTAGCGTCAGTTCAAAAACGACCGGCGATAATGACAACATGATGATGATCACTCCAGAGCTTCTTGGCCTCATGCCGTCAGGCAGTTCCGGTCATTCCGATGGTGGGGACAACGGCAGATCACATTCCGGACAAATCGGCTCCCATCATCACGGATCCAAGTCTTGGACACAGGACGACATGGACGCCGCTCTGGACGCTTTGCGAAATCACGATATGAGCCTCACAAAAGCATCCGCTACTTTTGGGATTCCATCGACGACGTTGTGGCAGCGGGCGCATCGACTCGGTATCGATACGCCGAAAAAAGACGGTCCGACGAAGTCGTGGAGCGACGAGAGTCTGAACAACGCTTTGGAGGCTCTGAGGACGGGAACAATTTCCGCGAATAAGGCATCGAAAGCTTTCGGAATACCCTCAAGCACCTTGTACAAGATTGCCAGGAGAGAAGGGATCAGATTAGCGGCACCTTTCAACGCCAGTCCGACCACGTGGTCGCCCGCTGACCTAGACAGAGCCTTGGAAGCGATTCGGTCTGGACAAACGTCCGTCCAGCGTGCTTCCACGGAATTTGGTATCCCGACTGGAACTCTTTATGGCAGATGCAAAAGAGAGGGGATCGAATTGAGCAGGAGCAATCCGACGCCTTGGAGCGAAGACGCCATGACTGAAGCTCTCGAGGCTGTTAGAATGGGTCACATGAGTATAAATCAAGCCGCGATACATTACAATTTGCCGTATTCGTCCCTTTACGGCAGATTCAAAAGAGGAAAGTATGAAGAACCGGTGGGAAATGAAATGTCACAGGACAGCAACAGCCTTCACTATCACAGTCCGAATCAAAATCACTCATCGTCTGTTCCCGATCAGATGCCTTATCAGGGTAGCTGA
Protein Sequence: MAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFTDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPPSSVSLSSPPRDRDSSGTGTPRLNYTKLRRQHHPRYKRPRFEARSSDTPGNRHFEKYKEEETEGFNNRDDKENHRDWQTEDEEFGEPTIVLESRQKEISNGNTNNNNGEMFCHTGMGHYGHHTDPGDVDLPPETQPTPPSATLVGTTITHLRDPDHQSTEIQNCDSVKIKFETLHTMDSTDTIDIDSHMSDRASVSSKTTGDNDNMMMITPELLGLMPSGSSGHSDGGDNGRSHSGQIGSHHHGSKSWTQDDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRMGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVGNEMSQDSNSLHYHSPNQNHSSSVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01413017;
80% Identity: iTF_01048329;